KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:58:11 2014 Check: 00 .. Name: ENSP00000360530/1-530 Len: 656 Check: 4166 Weight: 1.00 Name: ENSTTRP00000010196/1-532 Len: 656 Check: 8360 Weight: 1.00 Name: bmy_13890T0/1-651 Len: 656 Check: 2249 Weight: 1.00 Name: ENSBTAP00000016087/1-501 Len: 656 Check: 509 Weight: 1.00 // 1 50 ENSP00000360530/1-530 MGAAASRRRA LRSEAMSSVA AKVRAARAFG EYLSQSHPEN RNGADHLLAD ENSTTRP00000010196/1-532 MGAVASRRRA LRSEAMSSVA AKVRAARAFG EYLSQSHPEN RNGADHLLAD bmy_13890T0/1-651 MGAVASRRRA LRSEAMSSVA AKVRAARAFG EYLSQSHPEN RNGADHLLAD ENSBTAP00000016087/1-501 MGAVASRRRA LRSEAMSSVA AKVRAARAFG EYLSQSHPEN RNGADHLLAD 51 100 ENSP00000360530/1-530 AYSGHDGSPE MQPAPQNKRR LSLVSNGCYE GSLSEEPSIR KPAGEGPQPR ENSTTRP00000010196/1-532 AYSGHDGSPE MQPAPQNKRR LSLISNGRYE DSLPEEAVSG KPAGEGPQPR bmy_13890T0/1-651 AYSGHDGSPE MQPAPQNKRR LSLISNGRYE GSLPEEAVSG KPAGEGPQPR ENSBTAP00000016087/1-501 ACSGHDGSPE MQPAPQNKRR LSLISNGRYE GSLPEEAASG KPAGEGPQPR 101 150 ENSP00000360530/1-530 VYTISGEPAL LPSPEAEAIE LAVVKGRRQR --HPHHHSQP LRASPGGSRE ENSTTRP00000010196/1-532 VYTISGEPAL LPGPEAEAIE LAVVKGRQQR ERHPRHHSQP LRTSPGGSRE bmy_13890T0/1-651 VYTISGEPAL LPGPEAEAIE LAVVKGR--- --HPRHHSQP LRASPAGSRE ENSBTAP00000016087/1-501 VYTISGEPAL LPGPEAEAIE LAVVKGRRQR EQHPHHHSQP LRASPGGSHE 151 200 ENSP00000360530/1-530 DVSRPCQSWA GSRQGSKECP GCAQLAPGPT PRAFGLDQPP LPETSGRRKK ENSTTRP00000010196/1-532 DVSRPCQSWA GSRQGSRECP GCAQLAPSPS PQAFGLDQPP LPEAASRRKK bmy_13890T0/1-651 DVSRPCHSWA GSRQGSKECP GCAQLAPSPS PQAFGLDQPP LPEAASRRKK ENSBTAP00000016087/1-501 DVSRPCQSWA GSRQGSKECP GCAQLAPSPS PQAFGVDQPP LPEAPGRRKK 201 250 ENSP00000360530/1-530 LERMYSVDRV SDDIPIRTWF PKENLFSFQT ATTTMQAIS- ---------- ENSTTRP00000010196/1-532 LERMYSVDRV SDDIPIRTWF PKENLFSFQT ATTTMQAIS- ---------- bmy_13890T0/1-651 LERMYSVDRV SDDIPIRTWF PKENLFSFQT ATTTMQALGQ ARDLGLDHEG ENSBTAP00000016087/1-501 LERMYSVDRV SDDVPIRTWF PKENLFSFQT ATTTMQA--- ---------- 251 300 ENSP00000360530/1-530 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010196/1-532 ---------- ---------- ---------- ---------- ---------- bmy_13890T0/1-651 VLGPSERQGY SRACGNWAED RARQAGTFCL AQRPGCPAGP CARASVPTSL ENSBTAP00000016087/1-501 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000360530/1-530 ---------- -------VFR GYAERKRRKR ENDSASVIQR NFRKHLRMVG ENSTTRP00000010196/1-532 ---------- -------VFR GYAERKRRKR ENDSASVIQR NFRKHLRMVG bmy_13890T0/1-651 SLLPAAKGSA DSWWFPRVFR GYAERKRRKR ENDSASVIQR NFRKHLRMVG ENSBTAP00000016087/1-501 ---------- -------VFR GYAERKRRKR ENDSASVIQR NFRKHLRMVG 351 400 ENSP00000360530/1-530 SRRVKAQT-- ---------- ---------- FAERRERSFS RSWSDPTPMK ENSTTRP00000010196/1-532 SRRVKAQT-- ---------- ---------- FAERRERSFS RSWSDPTPMK bmy_13890T0/1-651 SRRVKAQTPA PVHLVRLQAP PLTGSAFAAA FAERRERSFS RSWSDPTPMK ENSBTAP00000016087/1-501 SRRVKAQT-- ---------- ---------- FAERRERSFS RSWSDPTPMK 401 450 ENSP00000360530/1-530 ADTSHDSRDS SDLQSSHCTL DEAFEDLDWD TEKGLEAVAC DTEGFVPPKV ENSTTRP00000010196/1-532 ADTSHDSRDS SDLQSSHGTL GEAFEDLDWE TERGLEAVAC DTEGFVPPKV bmy_13890T0/1-651 ADTSHDSRDS SDLQSSHCTL GEAFEDLDWE TERGLEAVAC DTEGFVPPKV ENSBTAP00000016087/1-501 ADTSHDSRDS SDLQSSHCTL GEAFEDLDWE TEKGLEAVAC DTEGFVPPKV 451 500 ENSP00000360530/1-530 MLISSKVPKA EYIPTIIRRD DPSIIPILYD HEHATFEDIL ---------- ENSTTRP00000010196/1-532 MLISSKVPKA EYIPTILRRD DPSIIPILYD HEHATFEDIL ---------- bmy_13890T0/1-651 MLISSKVPKA EYIPTILRRD DPSIIPILYD HEHATFEDIL GEYSAPLPSG ENSBTAP00000016087/1-501 MLISSKVPKA EYIPTIIRRD DPAIIPILYD HEHATFEDIL ---------- 501 550 ENSP00000360530/1-530 ---------- ----EEIERK LNVYHKGAKI WKMLIFCQGG PGHLYLLKNK ENSTTRP00000010196/1-532 ---------- ----EEIEKK LNVYHKGAKI WKMLIFCQGG PGHLYLLKNK bmy_13890T0/1-651 LGAAGGGTHT SASAEEIEKK LNVYHKGAKI WKMLIFCQGG PGHLYLLKNK ENSBTAP00000016087/1-501 ---------- ----EEIEKK LNIYHKGAKI WKMLIFCQGG PGHLYLLKNK 551 600 ENSP00000360530/1-530 VATFAKVEKE EDMIHFWKRL SRLMSKVNPE PNVIHIMGCY ILGNPNGEKL ENSTTRP00000010196/1-532 VATFAKVEKE EDMIHFWKRL SHLMSKVNPE PNVXXXXXXX XXXXXXXXXL bmy_13890T0/1-651 VATFAKVEKE EDMIHFWKRL SRLMSKVNPE PNVIHVMGCY VLGNPNGEKL ENSBTAP00000016087/1-501 VATFAKVEKE EDMIHFWKRL SRLMSKVNPE PNVIHVMGCY VLGNPNGEKL 601 650 ENSP00000360530/1-530 FQNLRTLMTP YRVTFESPLE LSAQGKQMIE TYFDFRLYRL WKSRQHSKLL ENSTTRP00000010196/1-532 FQNLRTLMTP YRVTFESPLE LSAQGKQMIE TYFDFRLYRL WKSRQHSKLL bmy_13890T0/1-651 FQNLRTLMTP YRVTFESPLE LSAQGKQMIE TYFDFRLYRL WKSRQHSKLL ENSBTAP00000016087/1-501 FQNLRTLMTP YRVIFESPLE LSAQGER--- ---------- ---------- 651 700 ENSP00000360530/1-530 DFDDVL ENSTTRP00000010196/1-532 DFEDVL bmy_13890T0/1-651 AFEDVL ENSBTAP00000016087/1-501 ------