KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:08 2014 Check: 00 .. Name: ENSTTRP00000004723/1-675 Len: 740 Check: 2294 Weight: 1.00 Name: ENSP00000263346/1-676 Len: 740 Check: 8809 Weight: 1.00 Name: ENSBTAP00000016057/1-612 Len: 740 Check: 8378 Weight: 1.00 Name: bmy_14286T0/1-739 Len: 740 Check: 3725 Weight: 1.00 Name: BACU004266/1-611 Len: 740 Check: 148 Weight: 1.00 // 1 50 ENSTTRP00000004723/1-675 ---------- ---------- ---------- ---------- ---------- ENSP00000263346/1-676 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016057/1-612 ---------- ---------- ---------- ---------- ---------- bmy_14286T0/1-739 QTERKFRKAA ARRRDTPDSR HRALSAQARR PLSFPLFLLP VSRRQRLLGP BACU004266/1-611 ---------- ---------- ---------- ---------- ---------M 51 100 ENSTTRP00000004723/1-675 MSRRALRRLR GEQRGQEPLG PGALQFVLHD DDDVEEEGPK RGPGGRRPRG ENSP00000263346/1-676 MSRRALRRLR GEQRGQEPLG PGALHFDLRD DDDAEEEGPK RELGVRRPGG ENSBTAP00000016057/1-612 ---------- ---------- ---------- ---------- ---------- bmy_14286T0/1-739 MSRRALRRLR GEQRGQEPLG PGALQFVLHD DDDVEEDGPK RGPGGRRPRG BACU004266/1-611 RNRAAQTRAL VLSADVEPLA ---------- ---------- ---------- 101 150 ENSTTRP00000004723/1-675 PGKEGVRVNN RFE-LXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263346/1-676 AGKEGVRVNN RFELINIDDL EDDPVVNGER SGCALTDAVA PGNKGRGQRG ENSBTAP00000016057/1-612 ---------- ----INIEDL DEAPGVNGER TDCLLVDAVV SGNKRRAQSG bmy_14286T0/1-739 SGEEGVRVNX CFQ-INIEDL EEAPGVNGDT TDCLLIHAAA SGNKRRAQSG BACU004266/1-611 ----GVQ--- ----INIEDL EEAPGVNGDR TDCLLVDAAA SGDKRRAQSG 151 200 ENSTTRP00000004723/1-675 XXXXXXXXXX XXXXXXXXXS NTSGKLRXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263346/1-676 NTESKTDGDD TET-VPSEQS HASGKLRKKK KKQKNKKSST GEASENGLED ENSBTAP00000016057/1-612 HSESTRGGNA ADTAVPSEQS NTCSKLRKKK RKQKNKKN-A GETSQNGLED bmy_14286T0/1-739 RAEPEKDGDV ADAAVPPEQS NTSGKLRKKK RKQKNKKNAA EESSENGLED BACU004266/1-611 RSESRKDGDV ADAAVPPEQS NTSGKLRKKK RKQKNKKNTA GESSENGLED 201 250 ENSTTRP00000004723/1-675 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263346/1-676 IDRILERIED STGLNRPGPA PLSSRKHVLY VEHRHLNPDT ELKRYFGARA ENSBTAP00000016057/1-612 IDRILERIED ASGASRPGPP PLSTKKHVLY VEHRHLNPDT ELKRYFGARA bmy_14286T0/1-739 IDRILERIED VSGCSRPGPP PLSAKKHVLY VEHRHLNPDT ELKRYFGARA BACU004266/1-611 IDRILERIED ASGCSHPGPP PLSAKKHVLY VEHRHLNPDT ELKRYFGARA 251 300 ENSTTRP00000004723/1-675 XXXXXXPRQR QRVYPKCTWL TTPKSAWPRY TKPXXXXXXX XXXXXXXXXX ENSP00000263346/1-676 ILGEQRPRQR QRVYPKCTWL TTPKSTWPRY SKPGLSMRLL ESKKGLSFFA ENSBTAP00000016057/1-612 VLGEQRPRQR QRMYPKCTWL TTPKSTWPRY TKPGLSMRLL ESRKGRSVFA bmy_14286T0/1-739 VLGEQRPRQR QRVYPKCTWL TTPKSAWPRY TKPGLSMRLL ESRKGRSAFA BACU004266/1-611 VLGEQRPRQR QRVYPKCTWL TTPKSAWPRY TKPGLSMRLL ESRKGRSTFA 301 350 ENSTTRP00000004723/1-675 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263346/1-676 FEHSEEYQQA QHKFLVAVES MEPNNIVVLL QTSPYHVDSL LQLSDACRFQ ENSBTAP00000016057/1-612 FEHSEEYQQT QHKFLAAVES MEPNNIVVLL QSSPYHVDSL LQLSDACRFQ bmy_14286T0/1-739 FEHSEEYQQT QHKFLAAVES MEPNNIVVLL QTSPYHVDSL LQLSDACRFQ BACU004266/1-611 FEHSEEYQQT QHKFLAAVES LEPNNIVVLL QTSPYHVDSL LQLSDACRFQ 351 400 ENSTTRP00000004723/1-675 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXSFYLALYK ENSP00000263346/1-676 EDQEMARDLV ERALYSMECA FHPLFSLTSG ACRLDYRRPE NRSFYLALYK ENSBTAP00000016057/1-612 EDQETARDLV ERALYSMECA FHPLFSLTSG TCRLDYRRPE NRSFYLALYK bmy_14286T0/1-739 EDQEMARDLV ERALYSMECA FHPLFSLTSG TCRLDYRRPE NRSFYLALYK BACU004266/1-611 EDQEMARDLV ERALYSMECA FHPLFSLTSG TCRLDYRRPE NRSFYLALYK 401 450 ENSTTRP00000004723/1-675 QMSFLEKRGC PRTALEYCKL ILSLEPDEDP LCMLLLLDHL ALRARSYEYL ENSP00000263346/1-676 QMSFLEKRGC PRTALEYCKL ILSLEPDEDP LCMLLLIDHL ALRARNYEYL ENSBTAP00000016057/1-612 QMSFLEKRGC PRTALEYCKL ILSLEPDEDP LCMLLLIDHL ALRARSYEYL bmy_14286T0/1-739 QMSFLEKRGC PRTALEYCKL ILSLEPDEDP LCMLLLLDHL ALRARSYEYL BACU004266/1-611 QMSFLEKRGC PRTALEYCKL ILSLEPDEDP LCMLLLLDHL ALRARSYEYL 451 500 ENSTTRP00000004723/1-675 IRLFQEWEAH RNLSQLPNFA FSVPLAHFLL SQQADLPDQE LSSAREKASL ENSP00000263346/1-676 IRLFQEWEAH RNLSQLPNFA FSVPLAYFLL SQQTDLPECE QSSARQKASL ENSBTAP00000016057/1-612 IRLFEEWEAH RNLSQLPNFA FSVPLAYFLL SQQADLSEQE MSSAREEACV bmy_14286T0/1-739 IRLFQEWEAH RNLSQLPNFA FSVPLAYFLL SQQADLPDQE LSSAREKASL BACU004266/1-611 IRLFQEWE-- ---------- ---------- ---------- -------ASL 501 550 ENSTTRP00000004723/1-675 LIRQALIMFP GVLMPLLEYC SVRPDATVAA HRFFGPDAEI SQPPALSQLV ENSP00000263346/1-676 LIQQALTMFP GVLLPLLESC SVRPDASVSS HRFFGPNAEI SQPPALSQLV ENSBTAP00000016057/1-612 RIQQALTMFP GVLMPLLEYC SVRPDTTVAT HHFFGPDAEI SQPPALSQLV bmy_14286T0/1-739 LIQQALFMFP GVLMPLLEYC SVRPDAAVAA HRFFGPDAEI SQPPALSQLV BACU004266/1-611 LIQQALFMFP GVLMPLLEYC SVRPDAAVAA HRFFGPDAEI SQPPALSQLV 551 600 ENSTTRP00000004723/1-675 SLYLGRSHFL WKEPATMSWL EENVHEVLQA VDAGDPAVEA CENRRKVLYQ ENSP00000263346/1-676 NLYLGRSHFL WKEPATMSWL EENVHEVLQA VDAGDPAVEA CENRRKVLYQ ENSBTAP00000016057/1-612 SLYLGRSHFL WKEPATMSWL EENVHKVLQV VDAGDPAVEA CESRRKVLYQ bmy_14286T0/1-739 SLYLGRSHFL WKEPATMSWL EENVHEVLQA VDAGDPAVEA CESRRKVLYQ BACU004266/1-611 SLYLGRSHFL WKEPATMSWL EENVHEVLQA VDAGDPAVEA CESRRKVLYQ 601 650 ENSTTRP00000004723/1-675 RAPRNIHRHV VLSEIKEAIA ALPPDVSTQS VLGYDPLPPL DTIYSYVRPE ENSP00000263346/1-676 RAPRNIHRHV ILSEIKEAVA ALPPDVTTQS VMGFDPLPPS DTIYSYVRPE ENSBTAP00000016057/1-612 RAPRNIHRHV VLSEIKEAVA ALPPDVTTQS VLGFDPLPPL DTIYSYVRPE bmy_14286T0/1-739 RAPRNIHRHV VLSEIKEAVA ALPPDVSTQS VLGYDPLPPL DTIYSYVRPE BACU004266/1-611 RAPRNIHRHV VLSEIKEAVA ALPPDVSTQS VLGYDPLPPL DTIYSYVRPE 651 700 ENSTTRP00000004723/1-675 ---------- ---RLSPVSH GNTIALFFRS LLPNYTVEGE RPEDGGAGGP ENSP00000263346/1-676 ---------- ---RLSPISH GNTIALFFRS LLPNYTMEGE RPEEGVAGGL ENSBTAP00000016057/1-612 ---------- ---RLSHVQG SGGARYFFPP LNPQHNSEGE RPEDGGPGGL bmy_14286T0/1-739 RYLLLCSFAH TAPRLSPVSH GNTIALFFRS LLPNYTVEGE RPEDGGAGGP BACU004266/1-611 RYLLLCSFAH TAPRLSPVSH GNTIALFFRS LLPNYTVEGE GPEEGGAGGP 701 750 ENSTTRP00000004723/1-675 HLDQGLNRLM LALRDMMANF HFHDLEVPRE DHLEGD-EWD ENSP00000263346/1-676 NRNQGLNRLM LAVRDMMANF HLNDLEAPHE DDAEGEGEWD ENSBTAP00000016057/1-612 HRDQGLNRLM LAVRDMMANF HFHDLEVLPE EHPEGDGEWD bmy_14286T0/1-739 HLDQGLNRLM LALRDMMANF HFHDLEVPRE DHPEGDGEWD BACU004266/1-611 HLDQGLNRLM LALRDMMANF HFHDVEVPRE DHPEGDGEWD