KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:45 2014 Check: 00 .. Name: BACU014436/1-113 Len: 382 Check: 7372 Weight: 1.00 Name: bmy_13961T0/1-252 Len: 382 Check: 7678 Weight: 1.00 Name: ENSTTRP00000003419/1-382 Len: 382 Check: 7912 Weight: 1.00 Name: ENSP00000340226/1-382 Len: 382 Check: 6368 Weight: 1.00 Name: ENSBTAP00000015947/1-382 Len: 382 Check: 6651 Weight: 1.00 // 1 50 BACU014436/1-113 MLDGLKMEEN FQSAIETSAS FSSLLGRAVS PKSVCEGCQR VISDRFLLRL bmy_13961T0/1-252 ---------- --MTLDKEAD LTPMLE---- ---------- ---------- ENSTTRP00000003419/1-382 MLDGRXXEEN FQGANETSAS FSSLLGRAVS PKSVCEGCQR VISDRFLLRL ENSP00000340226/1-382 MLDGLKMEEN FQSAIDTSAS FSSLLGRAVS PKSVCEGCQR VILDRFLLRL ENSBTAP00000015947/1-382 MLDGLKMEEN FQSAIETSAS FSSLLGRAVS PKSVCEGCQR VISDRFLLRL 51 100 BACU014436/1-113 NDSFWHEQCV QCTSCKEPLE TTCFYRDKKL YCKYDY---- ---------- bmy_13961T0/1-252 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003419/1-382 NDSFWHEQCV QCTSCKEPLE TTCFYRDKKL YCKYDYEKLF AVKCGGCFEA ENSP00000340226/1-382 NDSFWHEQCV QCASCKEPLE TTCFYRDKKL YCKYDYEKLF AVKCGGCFEA ENSBTAP00000015947/1-382 NDSFWHEQCV QCASCKEPLE TTCFYRDKKL YCKYDYEKLF AVKCGGCFEA 101 150 BACU014436/1-113 ---------- ---------- ---------- ---------- ------ENGS bmy_13961T0/1-252 ---------- ---------- ---------- ---------- ----MGKKGP ENSTTRP00000003419/1-382 IAPNEFVMRA QKSVYHLSCF CCCVCERQLQ KGDEFVLKEG QLLCKGDYEK ENSP00000340226/1-382 IAPNEFVMRA QKSVYHLSCF CCCVCERQLQ KGDEFVLKEG QLLCKGDYEK ENSBTAP00000015947/1-382 IAPNEFVMRA QKSVYHLSCF CCCVCERQLQ KGDEFVLKEG QLLCKGDYEK 151 200 BACU014436/1-113 EKCLSLTLSP V------NQD EES------- ---------- ---------- bmy_13961T0/1-252 EKHVPTLCQA NSFHPGKSDD EESLCKSAHG AGKGAAEDGK DHKRPKRPRT ENSTTRP00000003419/1-382 ERELLSLVSP AASDSGKSDD EESLCKSAHG AGKGATEDGK DHKRPKRPRT ENSP00000340226/1-382 ERELLSLVSP AASDSGKSDD EESLCKSAHG AGKGTAEEGK DHKRPKRPRT ENSBTAP00000015947/1-382 ERELLSLVSP AASDSGKSDD EESLCKSAHG AGKGASEDSK DHKRPKRPRT 201 250 BACU014436/1-113 ---------- ---------- ---------- ---------- ---------- bmy_13961T0/1-252 ILTTQQRRAF KASFEVSSKP CRKVRETLAA ETGLSVRVVQ VWFQNQRAKM ENSTTRP00000003419/1-382 ILTTQQRRAF KASFEVSSKP CRKVRETLAA ETGLSVRVVQ VWFQNQRAKM ENSP00000340226/1-382 ILTTQQRRAF KASFEVSSKP CRKVRETLAA ETGLSVRVVQ VWFQNQRAKM ENSBTAP00000015947/1-382 ILTTQQRRAF KASFEVSSKP CRKVRETLAA ETGLSVRVVQ VWFQNQRAKM 251 300 BACU014436/1-113 ---------- ---------- ---------- ---------- ---------- bmy_13961T0/1-252 KKLARRQQQQ QQDQQNSQRL SSAQTNGGGS AGMEGIMNPY TALPTPQQLL ENSTTRP00000003419/1-382 KKLARRQQQQ QQDQQNTQRL SSAQTNGGGS TGMEGIMNPY TALPTPQQLL ENSP00000340226/1-382 KKLARRQQQQ QQDQQNTQRL SSAQTNGGGS AGMEGIMNPY TALPTPQQLL ENSBTAP00000015947/1-382 KKLARRQQQQ QQDQQNTQRL SSAQTNGGGS AGMEGIMNPY TALPTSQQLL 301 350 BACU014436/1-113 ---------- ---------- --------FG EKP------- ---------- bmy_13961T0/1-252 AIEQSVYSSD PFRQGLTPPQ MPGDHMHPYG AEPLFHDLDS DDTSLSNLGD ENSTTRP00000003419/1-382 AIEQSVYSSD PFRQGLTPPQ MPGDHMHPYG AEPLFHDLDS DDTSLSNLGD ENSP00000340226/1-382 AIEQSVYSSD PFRQGLTPPQ MPGDHMHPYG AEPLFHDLDS DDTSLSNLGD ENSBTAP00000015947/1-382 AIEQSVYSSD PFRQGLTPPQ MPGDHMHPYG AEPLFHELDS EDTSLSNLGD 351 400 BACU014436/1-113 ---------- -----G---- ---------- -- bmy_13961T0/1-252 CFLATSEAGP LQSRVGNPID HLYSMQNSYF TS ENSTTRP00000003419/1-382 CFLATSEAGP LQSRVGNPID HLYSMQNSYF TS ENSP00000340226/1-382 CFLATSEAGP LQSRVGNPID HLYSMQNSYF TS ENSBTAP00000015947/1-382 CFLATSEAGP LQARVGNPID HLYSMQNSYF TS