KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:09 2014 Check: 00 .. Name: ENSTTRP00000000171/1-682 Len: 818 Check: 9797 Weight: 1.00 Name: bmy_03449T0/1-818 Len: 818 Check: 5753 Weight: 1.00 Name: BACU009318/1-751 Len: 818 Check: 7054 Weight: 1.00 Name: ENSBTAP00000015819/1-737 Len: 818 Check: 9981 Weight: 1.00 Name: ENSP00000419153/1-741 Len: 818 Check: 875 Weight: 1.00 // 1 50 ENSTTRP00000000171/1-682 ---------- ---------- ---------- ---------- ---------- bmy_03449T0/1-818 MQRVSRLTQR DRGWKMPGRQ EHVQSFDILQ VVATLQNGIF CVPGMVISSG BACU009318/1-751 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015819/1-737 ---------- ---------- ---------- ---------- ---------- ENSP00000419153/1-741 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000000171/1-682 ---------- ---------- -------MLE RKKPKTAENQ KASEENEITQ bmy_03449T0/1-818 SSHKTDFLVQ EKRLFFIIQS VPSKGPLFIF RKKPKTAENQ KASEENEITQ BACU009318/1-751 ---------- -------MQS VPSKGPLFIF RKKPKTAENQ KASEENEITQ ENSBTAP00000015819/1-737 ---------- ---------- ---------- -KKPKTAENQ KASEENEITQ ENSP00000419153/1-741 ---------- ---------- -------MLE RKKPKTAENQ KASEENEITQ 101 150 ENSTTRP00000000171/1-682 PGGSSAKPGL PCLNFEAVLS PGPALIHSTH SLTNSHAHTG SSDCDISCKG bmy_03449T0/1-818 PGGSSAKPGL PCLNFEAVLS PGPALIHSTH SLTNSHAHTG SSDRDISCKG BACU009318/1-751 PGGSSAKPGL PCLNFEAVLS PGPALIHSTH SLTNSHAHTG SSDCDISCKG ENSBTAP00000015819/1-737 PGGSSAKPGL PCLNFEAVLS PGPALIHSTH SLTNSHAHPG SSDCDISCKG ENSP00000419153/1-741 PGGSSAKPGL PCLNFEAVLS PDPALIHSTH SLTNSHAHTG SSDCDISCKG 151 200 ENSTTRP00000000171/1-682 XT-------- ---------- ---------- ---------- ---------- bmy_03449T0/1-818 MTERIHSINL HNFSNSVLET LNEQRNRGHF CDVTVRIHGS MLRAHRCVLA BACU009318/1-751 MTERIHSINL HNFSNSVLET LNEQRNRGHF CDVTVRIHGS MLRAHRCVLA ENSBTAP00000015819/1-737 MTERIHSINL HNFSNSVLET LNEQRNRGHF CDVTVRIHGS MLRAHRCVLA ENSP00000419153/1-741 MTERIHSINL HNFSNSVLET LNEQRNRGHF CDVTVRIHGS MLRAHRCVLA 201 250 ENSTTRP00000000171/1-682 --------KL ALGYHDIEIP SVVSVQSVQK LIDFMYSGVL RVSQSEALQI bmy_03449T0/1-818 AGSPFFQDKL LLGYSDIEIP SVVSVQSVQK LIDFMYSGVL RVSQSEALQI BACU009318/1-751 AGSPFFQDKL LLGYSDIEIP SVVSVQSVQK LIDFMYSGVL RVSQSEALQI ENSBTAP00000015819/1-737 AGSPFFQDKL LLGYSDIEIP SVVSVQSVQK LIDFMYSGVL RVSQSEALQI ENSP00000419153/1-741 AGSPFFQDKL LLGYSDIEIP SVVSVQSVQK LIDFMYSGVL RVSQSEALQI 251 300 ENSTTRP00000000171/1-682 LTAASILQIK TVIDECTRIV SQNVGDVFPG IQDSGQDTPR GTPESGTSGQ bmy_03449T0/1-818 LTAASILQIK TVIDECTRIV SQNVGDVFPG IQDSGQDTPR GTPESGTSGQ BACU009318/1-751 LTAASILQIK TVIDECTRIV SQNVGDVFPG IQDSGQDTPR GTPESGTSGQ ENSBTAP00000015819/1-737 LTAASILQIK TVIDECTRIV SQNVGDVFPG IQDSGQDTPR GTPESGTSGQ ENSP00000419153/1-741 LTAASILQIK TVIDECTRIV SQNVGDVFPG IQDSGQDTPR GTPESGTSGQ 301 350 ENSTTRP00000000171/1-682 SSDTESGYLQ SHPQHSVDRI YSALYACSMQ NGSGERSFYS GAVVSHHETA bmy_03449T0/1-818 SSDTESGYLQ SHPQHSVDRI YSALYACSMQ NGSGERSFYS GAVVSHHETA BACU009318/1-751 SSDTESGYLQ SHPQHSVDRI YSALYACSMQ NGSGERSFYS GAVVSHHETA ENSBTAP00000015819/1-737 SSDTESGYLQ SHPQHSVDRI YSALYACSMQ NGSGERSFYS GAVVSHHETA ENSP00000419153/1-741 SSDTESGYLQ SHPQHSVDRI YSALYACSMQ NGSGERSFYS GAVVSHHETA 351 400 ENSTTRP00000000171/1-682 LGLPRDHHME DPSWITRIHE RSQQMERYLS TTPETTHCRK QPRPVRIQTL bmy_03449T0/1-818 LGLPRDHHME DPSWITRIHE RSQQMERYLS TTPETTHCRK QPRPVRIQTL BACU009318/1-751 LGLPRDHHME DPSWITRIHE RSQQMERYLS TTPETTHCRK QPRPVRIQTL ENSBTAP00000015819/1-737 LGLPRDHHIE DPSWITRIHE RSQQMERYLS TTPETTHCRK QPRPVRIQTL ENSP00000419153/1-741 LGLPRDHHME DPSWITRIHE RSQQMERYLS TTPETTHCRK QPRPVRIQTL 401 450 ENSTTRP00000000171/1-682 VGNIHIKQEM EDDYDYYGQQ RVQILERNES EECTEDTDQA EGTESEPKGE bmy_03449T0/1-818 VGNIHIKQEM EDDYDYYGQQ RVQILERNES EECTEDTDQA EGTESEPKGE BACU009318/1-751 VGNIRIKQEM EDDYDYYGQQ RVQILERNES EECTEDTDQA EGTESEPKGE ENSBTAP00000015819/1-737 VGNIHIKQEM EDDYDYYGQQ RVQILERNES EECTEDTDQA EGTESEPKGE ENSP00000419153/1-741 VGNIHIKQEM EDDYDYYGQQ RVQILERNES EECTEDTDQA EGTESEPKGE 451 500 ENSTTRP00000000171/1-682 SFDSGVSSSI GTEPDSVEQQ FGPGAARDGQ AESAQPEQAA EAPAEGAPQP bmy_03449T0/1-818 SFDSGVSSSI GTEPDSVEQQ FGPGAARDGQ AESAQPEQAA EAPAEGAPPP BACU009318/1-751 SFDSGVSSSI GTEPDSVEQQ FGPGAARDGQ AESAQPEQAA EAPAEGAPPP ENSBTAP00000015819/1-737 SFDSGVSSSI GTEPDSVEQQ FGPGAARDSQ AEPAQPEQAA EAPAEGAPQP ENSP00000419153/1-741 SFDSGVSSSI GTEPDSVEQQ FGPGAARDSQ AEPTQPEQAA EAPAEGGPQT 501 550 ENSTTRP00000000171/1-682 HQLETGASSP ERSNEVELDS TVIAVSNSSD KSALQQPAVN TSIGQPLPST bmy_03449T0/1-818 HQLETGASSP ERSNEVEMDS TVITVSNSSD KSALQQPAVN TSIGQPLPST BACU009318/1-751 HQLETGASSP ERSNEVEMDS TVITVSNSSD KSALQQPAVN TSIGQPLPST ENSBTAP00000015819/1-737 HQLETGASSP ERSNEVEVDN TVITVSNSSD KSVLQQPSVN TSIGQPLPST ENSP00000419153/1-741 NQLETGASSP ERSNEVEMDS TVITVSNSSD KSVLQQPSVN TSIGQPLPST 551 600 ENSTTRP00000000171/1-682 QLYLRQTETL TSNLRMPLTL TSNTQVIGTA GNTYLPAF-- TQPAGS-PKP bmy_03449T0/1-818 QLYLRQTETL TSNLRMPLTL TSNTQVIGTA GNTYLPALFT TQPAGSGPKP BACU009318/1-751 QLYLRQTETL TSNLRMPLTL TSNTQVIGTA GNTYLPALFT TQPAGSGPKP ENSBTAP00000015819/1-737 QLYLRQTETL TSNLRMPLTL TSNTQVIGTA GNTYLPALFT TQPAGSGPKP ENSP00000419153/1-741 QLYLRQTETL TSNLRMPLTL TSNTQVIGTA GNTYLPALFT TQPAGSGPKP 601 650 ENSTTRP00000000171/1-682 FLXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_03449T0/1-818 FLFSLPQPLA GQQTQFVTVS QPGLSTFTAQ LPAPQPLAPS AGHSTASGQG BACU009318/1-751 FLFSLPQPLA GQQTQFVTVS QPGLSTFTAQ LPAPQPLAPS AGHSTASGQG ENSBTAP00000015819/1-737 FLFSLPQPLA GQQTQFVTVS QPGLSTFTAQ LPAPQPLAPS AGHSTASGQG ENSP00000419153/1-741 FLFSLPQPLA GQQTQFVTVS QPGLSTFTAQ LPAPQPLASS AGHSTASGQG 651 700 ENSTTRP00000000171/1-682 XXXXXXXXXX XXXXXXXXNY VKHMFVHTGE KPHQCSICWR SFSLKDYLIK bmy_03449T0/1-818 EKKPYECTLC NKTFTAKQNY VKHMFVHTGE KPHQCSICWR SFSLKDYLIK BACU009318/1-751 EKKPYECTLC NKTFTAKQNY VKHMFVHTGE KPHQCSICWR SFSLKDYLIK ENSBTAP00000015819/1-737 EKKPYECTLC NKTFTAKQNY VKHMFVHTGE KPHQCSICWR SFSLKDYLIK ENSP00000419153/1-741 EKKPYECTLC NKTFTAKQNY VKHMFVHTGE KPHQCSICWR SFSLKDYLIK 701 750 ENSTTRP00000000171/1-682 HMVTHTGVRA YQCSICNKRF TQKSSLNVHM RLHRGEKSYE CYICKKKFSH bmy_03449T0/1-818 HMVTHTGVRA YQCSICNKRF TQKSSLNVHM RLHRGEKSYE CYICKKKFSH BACU009318/1-751 HMVTHTGVRA YQCSICNKRF TQKSSLNVHM RLHRGEKSYE CYICKKKFSH ENSBTAP00000015819/1-737 HMVTHTGVRA YQCSICNKRF TQKSSLNVHM RLHRGEKSYE CYICKKKFSH ENSP00000419153/1-741 HMVTHTGVRA YQCSICNKRF TQKSSLNVHM RLHRGEKSYE CYICKKKFSH 751 800 ENSTTRP00000000171/1-682 KTLLERHVAL HSASNGTPPA GTPPGARAGP PGVVACTEGT TYVCSVCPAK bmy_03449T0/1-818 KTLLERHVAL HSASNGTPPA GTPPGARAGP PGVVACTEGT TYVCSVCPAK BACU009318/1-751 KTLLERHVAL HSASNGTPPA GTPPGARAGP PGVVACTEGT TYVCSVCPAK ENSBTAP00000015819/1-737 KTLLERHVAL HSASNGTPPA GTPPGSRAGP PGVGACTEGT TYVCSVCPAK ENSP00000419153/1-741 KTLLERHVAL HSASNGTPPA GTPPGARAGP PGVVACTEGT TYVCSVCPAK 801 850 ENSTTRP00000000171/1-682 FDQIEQFNDH MRMHVSDG bmy_03449T0/1-818 FDQIEQFNDH MRMHVSDG BACU009318/1-751 FDQIEQFNDH MRMHVSDG ENSBTAP00000015819/1-737 FDQIEQFNDH MRMHVSDG ENSP00000419153/1-741 FDQIEQFNDH MRMHVSDG