KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:31 2014 Check: 00 .. Name: ENSP00000262710/1-1341 Len: 1347 Check: 8302 Weight: 1.00 Name: ENSBTAP00000015372/1-1336 Len: 1347 Check: 1224 Weight: 1.00 Name: bmy_13929T0/1-764 Len: 1347 Check: 5 Weight: 1.00 Name: BACU008644/1-1295 Len: 1347 Check: 8973 Weight: 1.00 Name: ENSTTRP00000001424/1-1334 Len: 1347 Check: 1098 Weight: 1.00 // 1 50 ENSP00000262710/1-1341 MWRRKHPRTS GGTRGVLSGN RGVEYGSGRG HLGTFEGRWR KLPKMPEAVG ENSBTAP00000015372/1-1336 MCRRKHPSTS GGTRGALSGN RGVDYGSGRG QLGTFEGRWR KLPKMPEAVG bmy_13929T0/1-764 MWRRKHPSIS GGTRGVLSGN RGVDYGSGRG QLGTFEGRWR KLPKMPEAVG BACU008644/1-1295 ---------- ---------- ---------- ---------- ----MPEAVG ENSTTRP00000001424/1-1334 MWRRKHPRIS GGARGVLSGN RGVDYGSGRG QLGTFEGRWR KLPKMPEAVG 51 100 ENSP00000262710/1-1341 TDPSTSRKMA ELEEVTLDGK PLQALRVTDL KAALEQRGLA KSGQKSALVK ENSBTAP00000015372/1-1336 TDPSTSRKMA ELEEVTLDGK PLQALRVTDL KAALEQRGLA KSGQKSALVK bmy_13929T0/1-764 TDPSTSRKMA ELEEVTLDGK PLQALRVTDL KAALEQRGLA KSGQKSALVK BACU008644/1-1295 TDPSTSRKMA ELEEVTLDGK PLQALRVTDL KAALEQRGLA KSGQKSALVK ENSTTRP00000001424/1-1334 TDPSTSRKMA ELEEVTLDGK PLHALRVTDL -AALEQRGLA KSGQKSALLK 101 150 ENSP00000262710/1-1341 RLKGALMLEN LQKHSTPHAA FQPNSQIGEE MSQNSFIKQY LEKQQELLRQ ENSBTAP00000015372/1-1336 RLKGALMLEN LQKHSTPHAA FQPNSQIGEE MSQNSFIKQY LEKQQELLRQ bmy_13929T0/1-764 RLKGALMLEN LQKHSTPHAA FQPNSQIGEE MSQNSFIKQY LEKQQELLRQ BACU008644/1-1295 RLKGALMLEN LQKHSTPHAA FQPNSQIGEE MSQNSFIKQY LEKQQELLRQ ENSTTRP00000001424/1-1334 RLKGALMLEN LQKHSTPHAA FQPNSQIGEE MSQNSFIKQY LEKQQELLRQ 151 200 ENSP00000262710/1-1341 RLEREAREAA ELEEASAESE DEMIHPEGVA SLLPPDFQSS LERPELELSR ENSBTAP00000015372/1-1336 RLEREAREAA ELEEASAESE DEMIHPERVA SLLPPDFQSS LERPELELSR bmy_13929T0/1-764 RLEREAREAA ELEEASAESE DEMIHPEGVA SLLPPDFQSS LERPELELSR BACU008644/1-1295 RLEREAREAA ELEEASAESE DEMIHPEGVA SLLPPDFQSS LERPELELSR ENSTTRP00000001424/1-1334 RLEREAREAA ELEEASAESE DEMIHPEGVA SLLPPDFQSS LERPELELSR 201 250 ENSP00000262710/1-1341 HSPRKSSSIS EEKGDSDDEK PRKGERRSSR VRQARAAKLS EGSQPAEEEE ENSBTAP00000015372/1-1336 HSPRKSTSVS EEKGESDDEK PRKGERRSSR VRQARAAKLS ECSQAAEEEE bmy_13929T0/1-764 HSPRKSASVS EEKGESDDEK PRKGERRSSR VRQARAAKLS ECIQAAEEEE BACU008644/1-1295 HSPRKSASVS EEKGESDDEK PRKGERRSSR VRQARAAKLS ECIQAAEEEE ENSTTRP00000001424/1-1334 HSPRKSASIS EEKGESDDEK PRKGERRSSR VRQARAAKLS ECSQAAEEEE 251 300 ENSP00000262710/1-1341 DQETPSRNLR VRADRNLKTE EEEEEEEEEE EDDEEEEGDD EGQKSREAPI ENSBTAP00000015372/1-1336 DQETPSRNLR VRADRNLKTE EEEEEEEEEE EEEEEEDDDD EGQKSRDAPV bmy_13929T0/1-764 DQETPSRNLR LRADRNLKTE EEEEEDEEEE EEEEEEEDDD EGQKSRDAPV BACU008644/1-1295 DQETPSRNLR LRADRNLKTE EEEEEDEEEE EEEEEEEDDD EGQKSRDAPV ENSTTRP00000001424/1-1334 DQETPSRNLR LRADRNLKTE EEEEEDEEEE EEEEEEEDDD EGQKSRDAPV 301 350 ENSP00000262710/1-1341 LKEFK-EEGE EIPRVKPEEM MDERPKT-RS QEQEVLERGG RFTRSQEEAR ENSBTAP00000015372/1-1336 LKQFK-EEGE EIPIVKVEEV TDERPQTIRS QEQEGLERGG RVTRSQEEAR bmy_13929T0/1-764 LKQFKEEEGE EMPSVKVEEV MDERPQTIRS QEEEGLERGG RVTRSQEEAR BACU008644/1-1295 LKQFKEEEGE EMPSVKVEEV MDERPQTIRS QDQEGLERGG RVTRSQEEAR ENSTTRP00000001424/1-1334 LKQFKEEEGE EKPSVKVEEV MDERSQTIRS QEQEGLERGG RVTRSQEEAR 351 400 ENSP00000262710/1-1341 KSHLARQQQE KEMKTTSPLE EEEREIKSSQ GLKEKSKSPS PPRLTEDRKK ENSBTAP00000015372/1-1336 RSHLARHQQE KEMKTASL-- EEEREIKSSK GLEEKSKSPS PPQLTEDVAK bmy_13929T0/1-764 RSHLARHQQE KEMKTASPLE EEEREIKPSK SLEEKSKSPS PPRLTEDLEK BACU008644/1-1295 RSHLARHQQE KEMKTASPLE EEEREIKPSK SLEEKSKSPS PPRLTEDLEK ENSTTRP00000001424/1-1334 RSHLARHQQE KEMKTASPLE EEEREIKPSK SLEEKSKSPS PPRLTEDLEK 401 450 ENSP00000262710/1-1341 ASLVALPEQT ASEEETPPPL LTKEASSPPP HPQLHSEEEI EPMEGPAPAV ENSBTAP00000015372/1-1336 APVVLQPELT ASEEETPPPL LTKEASSPPP NTQLQSEEEI EPMEGPAPPV bmy_13929T0/1-764 APVVLQPEQT ASEEETPPPL LTKEASSPPP NTQLQSEEEI EPMEGPAPPV BACU008644/1-1295 APVVLQPEQT ASEEETPPPL LTKEASSPSP NTQLQSEEEI EPMEGPAPPV ENSTTRP00000001424/1-1334 APVVLQPEQT ASEEETPPPL LTKEASSPPP NTQLQSEEEI EPMEGPAPPV 451 500 ENSP00000262710/1-1341 LIQLSPPNTD ADTRELLVSQ HTVQLVGGLS PLSSPSDTKA ESPAEKVPEE ENSBTAP00000015372/1-1336 LIQLSPPNAD AEARELLLSQ HTVQLVGSLS PLSGPADTKV ESPVEKVPEE bmy_13929T0/1-764 LIQLSPPNTD AEARELLLSQ HTVQLVGGLS PLSSPADTKV ESPVEKVPEE BACU008644/1-1295 LIQLSPPNTD AEARELLLSQ HTVQLVGALS PLSSPADTKV ESPVEKVPEE ENSTTRP00000001424/1-1334 LIQLSPPNTD AEARELLLSQ HTVQLVGGLS PLSSPADTKV ESPVEKVPEE 501 550 ENSP00000262710/1-1341 SVLPLVQKST LADYSAQKDL EPESDRSAQP LPLKIEELAL AKGITEECLK ENSBTAP00000015372/1-1336 SVLPLVQKSA QAESSAQKGL ETESEKSTQP LPLKIEEFTL AKGITEE--- bmy_13929T0/1-764 SVLPLVQKST QAESSTQKGL ETESEKSAQP LPLKIEEFTL AKGITEE--- BACU008644/1-1295 SVLPLVQKST QAESSTQKGL ETESEKSAQP LPLKIEEFTL ATGITEE--- ENSTTRP00000001424/1-1334 SVLPLVQKST QAESSTQKGL ETESEKSAQP LPLKIEEFTL AKGITEE--- 551 600 ENSP00000262710/1-1341 QPSLEQKEGR RASHTLLPSH RLKQSADSSS SRSSSSSSSS SRSRSRSPDS ENSBTAP00000015372/1-1336 --SLEQKEGR RASHALLPSH RLKQSADSSS SRSSSSSSSS SRSRSRSPDS bmy_13929T0/1-764 --SLEQKEGR RASHTLVPGH RLKRSADSSS SRSSSSSSSS SRSRSRSPDS BACU008644/1-1295 --SLEQKEGR RASHTLVPSH RLKRSADSSS SRSSSSSSSS SRSRSRSPDS ENSTTRP00000001424/1-1334 --SLEQKEDR RASHTLVPSH RLKRSADSSS SRSSSSSSSS SRSRSRSPDS 601 650 ENSP00000262710/1-1341 SGSRSHSPLR SKQRDVAQAR THANPRGRPK MGSRSTSE-- SRSRSRSRSR ENSBTAP00000015372/1-1336 SGSQSHSPPR SKQRDGSGVR AHANPHDRSK VGSRSTSE-- SRSRSRSRSR bmy_13929T0/1-764 SGSQSHSPPR SKQRDVSQAG THSNPRGRPK MGSRSTSESR SRSRSRSRSR BACU008644/1-1295 SGSQSHSSPR SKQRDVSQAG THSNPRGRPK MGSRSTSESR SRSRSRSRSR ENSTTRP00000001424/1-1334 SGSQSHSPPR SKQRDVSQAG THSNPRGRPK MGSRSTSE-- SRSRSRSRSR 651 700 ENSP00000262710/1-1341 SASSNSRKSL SPGVSRDSST SYTETKDPSS GQEVATPPVP QLQVCEPKER ENSBTAP00000015372/1-1336 SASSNSRKSL SPGVSRDSST SYTETKDPSS GQEVAAPPLP QLQVLEPKER bmy_13929T0/1-764 SASSNSRKSL SPGVSRDSST SYTETKDPSS GQEVATPPLP QLRVLEPKER BACU008644/1-1295 SASSNSRKSL SPGVCRDSST SYTETKDPSS GQEVATPPLP QLQVLEPKER ENSTTRP00000001424/1-1334 SASSNSRKSL SPGVSRDSST SYTETKDPSS GQEVATPPLP QLQVLEPKER 701 750 ENSP00000262710/1-1341 TSTSSSSVQA RRLSQPESAE KHVTQRLQPE RGSPKKCEAE EAEPPAATQP ENSBTAP00000015372/1-1336 TST-PSSVQV RLVSQPEPAA KHVTQRLQPD RGSPKKCEAE EAEPPAATQP bmy_13929T0/1-764 TST-STSIRV RRMSQPEPAE KHVTQRLQPE RGSPKKCEAE EAEPPAATQP BACU008644/1-1295 TST-STSVRV RRMSQPEPAE KHVTQRLQPE RGSPKKCEAE EAEPPAATQP ENSTTRP00000001424/1-1334 TST-STSILV RRMSQPEPAE KHVTQRLQPE RGSPKKCEAE EAEPPAATQP 751 800 ENSP00000262710/1-1341 QTSETQTSHL PESERIHHTV EEKEEVTMDT SENRPENDVP EPPMPIADQV ENSBTAP00000015372/1-1336 QTSETPTSHL PESERIHHTV EEKEEVTMDT SENRPENEVP EPPMPIADQV bmy_13929T0/1-764 QTSETPTSHL PESERIHHTV ---------- ---------- ---------- BACU008644/1-1295 QTSETSTSHL PESERIHHTV EEEKEVTMDA SENRPENEVP EPPMPIADQV ENSTTRP00000001424/1-1334 QTSETPTPHL PESERIHHTV EEKEEVTMDT SENRPENEVP EPPMPIADQV 801 850 ENSP00000262710/1-1341 SNDDRPEGSV EDEEKKESSL PKSFKRKISV V--SATKGVP AGNSDTEGGQ ENSBTAP00000015372/1-1336 SNDDRPEGNA EDEEKKESLL PKSFKRKISV VWTAATKGVP AGNSDTEGGQ bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ---------- BACU008644/1-1295 SNDDRPEGSA EDEEKKESSL PKSFKRKISV V--SATKGVP AGNSDTEGGQ ENSTTRP00000001424/1-1334 SNDDRPEGSA EDEEKKESSL PKSFKRKISV V--SATKGVP AGNSDTEGGQ 851 900 ENSP00000262710/1-1341 PGRKRRWGAS TATTQKKPSI SITTESLKSL IPDIKPLAGQ EAVVDLHADD ENSBTAP00000015372/1-1336 PSRKRRWGAS TATTQKKPSI SITTESLKSL IPDIKPLAGQ EAVVDLHADD bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ---------- BACU008644/1-1295 PSRKRRWGAS TATTQKKPSI SITTESLKSL IPDIKPLAGQ EAVVDLHADD ENSTTRP00000001424/1-1334 PSRKRRWGAS TATTQKKPSI SITTESLKSL IPDIKPLAGQ EAVVDLHADD 901 950 ENSP00000262710/1-1341 SRISEDETER NGDDGTHDKG LKICRTVTQV VPAEGQENGQ REEEEEEKEP ENSBTAP00000015372/1-1336 SRISEDETER NGDDGTHDKG LKICRTVTQV VPAEGQENGQ REEEEEEKEP bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ---------- BACU008644/1-1295 SRISEDETER NGDDGTHDKG LKICRTVTQV VPSEGQENGQ REEEEEEKEP ENSTTRP00000001424/1-1334 SRISEDETER NGDDGTHDKG LKICRTVTQV VPSEGQENGQ REEEEEEKEP 951 1000 ENSP00000262710/1-1341 EAEPPVPPQV SVEVALPPPA EHEVKKVTLG DTLTRRSISQ QKSGVSITID ENSBTAP00000015372/1-1336 EAEAPVPPQV SVEVALPPPV EHEVKKVTLG DTLTRRSISQ QKSGVSITID bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ---------- BACU008644/1-1295 EAEAPVPPQV SVEVALPPPV EHEVKKVTLG DTLTRRSISQ QKSGVSITID ENSTTRP00000001424/1-1334 EAEAPVPPQV SVEVALPPPV EHEVKKVTLG DTLTRRSISQ QKSGVSITID 1001 1050 ENSP00000262710/1-1341 DPVRTAQVPS PPRGKISNIV HISNLVRPFT LGQLKELLGR TGTLVEEAFW ENSBTAP00000015372/1-1336 DPVRTAQVPS PPRGKISNIV HISNLVRPFT LGQLKELLGR TGTLVEEAFW bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ---------- BACU008644/1-1295 DPVRTAQVPS PPRGKISNIV HISNLVRPFT LGQLKELLGR TGTLVEEAFW ENSTTRP00000001424/1-1334 DPVRTAQVPS PPRGKISNIV HISNLVRPFT LGQLKELLGR TGTLVEEAFW 1051 1100 ENSP00000262710/1-1341 IDKIKSHCFV TYSTVEEAVA TRTALHGVKW PQSNPKFLCA DYAEQDELDY ENSBTAP00000015372/1-1336 IDKIKSHCFV TYSTVEEAVA TRTALHGVKW PQSNPKFLCA DYAEQDELDY bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ---------- BACU008644/1-1295 IDKIKSHCFV TYSTVEEAVA TRTALHGVKW PQSNPKFLCA DYAEQDELDY ENSTTRP00000001424/1-1334 IDKIKSHCFV TYSTVEEAVA TRTALHGVKW PQSNPKFLCA DYAEQDELDY 1101 1150 ENSP00000262710/1-1341 HRGLLVDRPS ETKTEEQGIP RPLHPPPPPP VQPPQHPRAE QREQERAVRE ENSBTAP00000015372/1-1336 HRGLLVDRPS ETKTEEQGMP RPLHPPPPPP AQPPQHPRAE QREQERAVRE bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ---------- BACU008644/1-1295 HRGLLVDRPS ETKTEEQGVP RPLHPPPPPP AQPPQHPRAE QREQERAVRE ENSTTRP00000001424/1-1334 HRGLLVDRPS ETKTEEQGVP RPLHPPPPPP AQPPQHPRAE QREQERAVRE 1151 1200 ENSP00000262710/1-1341 QWAEREREME RRERTRSERE WDRDKVREGP RSRSRSRDRR RKERAKSKEK ENSBTAP00000015372/1-1336 QWAEREREME RRERTRSERE WDRDKVREGP RSRSRSRDRR RKERAKSKEK bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ---------- BACU008644/1-1295 QWAEREREME RRERTRSERE WDRDKVREGP RSRSRSRDRR RKERAKSKEK ENSTTRP00000001424/1-1334 QWAEREREME RRERTRSERE WDRDKVREGP RSRSRSRDRR RKERAKSKEK 1201 1250 ENSP00000262710/1-1341 KSEKKEKAQE EPPAKLLDDL FRKTKAAPCI YWLPLTDSQI VQKEAERAER ENSBTAP00000015372/1-1336 KSEKKEKAQE EPPAKLLDDL FRKTKAAPCI YWLPLTDSQI VQKEAERAER bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ---------- BACU008644/1-1295 KSEKKEKAQE EPPAKLLDDL FRKTKAAPCI YWLPLTDSQI VQKEAERAER ENSTTRP00000001424/1-1334 KSEK--KAQE EPPAKLLDDL FRKTKAAPCI YWLPLTDSQI VQKEAERAER 1251 1300 ENSP00000262710/1-1341 AKEREKRRKE QEEEEQKERE KEAERERNRQ LEREKRREHS RERDRERERE ENSBTAP00000015372/1-1336 AKEREKRRKE QEEEEQKERE KEAERERTRQ LEREKRREHS RERDRERERD bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ---------- BACU008644/1-1295 AKEREKRRKE QEEEEQKERE KEAERERTRQ LEREKRREHS RERDRERERD ENSTTRP00000001424/1-1334 AKEREKRRKE QEEEEQKERE KEAERERTRQ LEREKRREHS RERDRERERD 1301 1350 ENSP00000262710/1-1341 RERDRGDRDR DRERDRERGR ERDRRDTKRH SRSRSRSTPV RDRGGRR ENSBTAP00000015372/1-1336 RERDRGDRDR ERDRERERGR ERDRRDTKRH SRSRSRSTPV RDRGGRR bmy_13929T0/1-764 ---------- ---------- ---------- ---------- ------- BACU008644/1-1295 RERDRGDRDR ERDRDRERGR ERDRRDTKRH SRSRSRSTPV RDRGGRR ENSTTRP00000001424/1-1334 RERDRGDRDR ERDRDRERGR ERDRRDTKRH SRSRSRSTPV RDRGGRR