KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:55:04 2014 Check: 00 .. Name: ENSP00000263071/1-830 Len: 923 Check: 6506 Weight: 1.00 Name: ENSBTAP00000015261/1-841 Len: 923 Check: 1802 Weight: 1.00 Name: BACU010460/1-884 Len: 923 Check: 7371 Weight: 1.00 Name: bmy_00173T0/1-870 Len: 923 Check: 8152 Weight: 1.00 Name: ENSTTRP00000006493/1-639 Len: 923 Check: 9528 Weight: 1.00 // 1 50 ENSP00000263071/1-830 ---------- ---------- ---------- ---------M GLGLLLPLLL ENSBTAP00000015261/1-841 ---------- ---------- --------TD PSPPAALAAM GPGLLFPLLL BACU010460/1-884 ---------- ---------- ---------- ---------M GLGLLFPLLL bmy_00173T0/1-870 MAARPSGLVS SGKALGGSRE GVGSCGGQTN PSPPTALAAM GLGLLCPLLL ENSTTRP00000006493/1-639 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000263071/1-830 LWTRGTQGSE LDPKGQHVCV ASSPSAELQC CAGWRQKDQE CTIPICEGPD ENSBTAP00000015261/1-841 LEALGAPGSE LDAGGRHVCK ASSPSAELQC CPGWRRKDRE CTIPICEGLD BACU010460/1-884 LWTRGTQGSE LDPNGRHVCM ASSPSAELQC CPGWRQKDRE CTTPICEGLD bmy_00173T0/1-870 LWTRGTQGSE LDPNGQHVCM ASSPSAELQC CPGWRQKDRE CTTPICEGLD ENSTTRP00000006493/1-639 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000263071/1-830 ACQKDEVCVK PGLCRCKPGF FGAHCSSRCP GQYWGPDCRE SCPCHPHGQC ENSBTAP00000015261/1-841 ACREDEVCVK PGLCRCKPGF FGAQCNSRCP GQYWGPDCRE VCACHPHGQC BACU010460/1-884 VCREDEVCVK PGLCRCKPGF FGARCNSRCP GQYWGPDCRE NCACHPHGQC bmy_00173T0/1-870 VCREDEVCVK PGLCRCKPGF FGARCNSRCP GQYWGPDCRE NCACHPHGQC ENSTTRP00000006493/1-639 -----EVCV- PGLCRCKPGF FGARCNSRCP GQYWGPDCRE SCACHPHGQC 151 200 ENSP00000263071/1-830 EPATGACQCQ ADRWGARCEF PCACGPHGRC DPATGVCHCE PGWWSSTCRR ENSBTAP00000015261/1-841 EPATGVCHCQ PDRWGDRCEF PCACGPHGRC NPETGACRCE PGWWSPTCRR BACU010460/1-884 EPATGVCHCQ SDRWGDRCEF PCACGPHGRC NPETGACRCE PGWWSPTCRR bmy_00173T0/1-870 EPATGVCHCQ SDRWGDRCEF PCACGPHGRC NPETGACRCE PGWWSPTCRR ENSTTRP00000006493/1-639 EPATGVCHCQ SDRWGDRCEF PCACGPHGRC NPETGACRCE PGWWSPTCRR 201 250 ENSP00000263071/1-830 PCQCNTAAAR CEQATGA--- ---------- ---------- ---------- ENSBTAP00000015261/1-841 PCQCNPAAAR CDQATGS--- ---------- ---------- ---------- BACU010460/1-884 PCQCNPXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_00173T0/1-870 PCQCNPAAAR CDQATGS--- ---------- ---------- ---------- ENSTTRP00000006493/1-639 PCQCNPVAAR CDQATGS--- ---------- ---------- ---------- 251 300 ENSP00000263071/1-830 ---------- ---------- CVCKPGWWGR RCSFRCNCHG SPCEQDSGRC ENSBTAP00000015261/1-841 ---------- ---------- CLCEPGWWGR RCSFRCACHG SPCAQESGRC BACU010460/1-884 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_00173T0/1-870 ---------- ---------- CLCEPGWWGR RCSFRCACHG SPCAQESGRC ENSTTRP00000006493/1-639 ---------- ---------- CLCEPGWWGR RCSFRCACHG SPCAQESGRC 301 350 ENSP00000263071/1-830 ACRPGWWGPE CQQQCECVRG RCSAASGECT CPPGFRGARC ELPCPAGSHG ENSBTAP00000015261/1-841 ACRPGWWGPE CRQPCECVRG RCSAVSGQCS CPPGFQGVRC ELPCPAGQYG BACU010460/1-884 XXXXGWWGSE CRQPCECVRG RCSAASGLCT CPPGFRGARC GLPCPAGRYG bmy_00173T0/1-870 ACRPGWWGSE CRQPCECVRG RCSAASGLCT CPPGFRGARC ELPCPAGRFG ENSTTRP00000006493/1-639 ACRPGWWGSE CRQPCECVRG RCSAASGLCT CPPGFRGARC ELPCPAGRYG 351 400 ENSP00000263071/1-830 VQCAHSCGRC KHNEPCSPDT GSCESCEPGW NGTQCQQPCL PGTFGESCEQ ENSBTAP00000015261/1-841 LRCRDSCGHC KQNKPCSADT GSCEACKPGW NGTQCHQPCP PGTFGENCSQ BACU010460/1-884 LQCRDSCGHC KQHEPCSADT GSCKSCEPGW NGTQCHEPCP PGTFGESCRQ bmy_00173T0/1-870 LQCRDSCGHC KQHEPCSADT GSCESCEPGW NGTQCHEPCP PGTFGESCRQ ENSTTRP00000006493/1-639 LQCRDSCGHC KQNEPCSADT GSCESCKPGW NGTQCHEPCP PGTFGESCRQ 401 450 ENSP00000263071/1-830 QCPHCRHGEA CEPDTGHCQR CDPGWLGPRC EDPCPTGTFG EDCGSTCPTC ENSBTAP00000015261/1-841 QCPHCRLGEA CQPDTGHCQR CEPGWRGPRC EDPCLIGTFG EGCGSTCPTC BACU010460/1-884 QCPHCRLGEA CQPDTGHCRH CDPGWLGPRC EDPCPIGTFG EGCGSTCPTC bmy_00173T0/1-870 QCPHCRLGEA CQPDTGHCRH CDPGWLGPRC EDPCPIGTFG EGCGSTCPTC ENSTTRP00000006493/1-639 QCPHCRLGEA CQPDTGHCRH CDPGWLGPRC EDPCPIGTFG EGCGSTCPTC 451 500 ENSP00000263071/1-830 VQGSCDTVTG DCVCSAGYWG PSCNASCPAG FHGNNCSVPC ECPEGLCHPV ENSBTAP00000015261/1-841 VQGACDAVTG ECVCNAGYWG PSCNTSCPSG FHGNNCSVPC ECPEGNCDPV BACU010460/1-884 VQGACDAVTG ECVCDAGYWG PSCNTSCPSG FHGNNCSVPC ECPEGNCHPV bmy_00173T0/1-870 VQGACDAVTG ECVCNAGYWG PSCNTSCPSG FHGNNCSVPC ECPEGNCHPV ENSTTRP00000006493/1-639 VRGACDAVTG ECACNAGYWG PSCNTSCPSG FHGNNCSVPC ECPEGNCHPV 501 550 ENSP00000263071/1-830 SGSCQPGSGS RDTALIAGSL VPLLLLFLGL ACCACCCWAP RSDLKDRPAR ENSBTAP00000015261/1-841 SGACQLGSHS QDAALIAGIL VPLLLLLLAI ACCACCCWAA RLDPKDRPVR BACU010460/1-884 SGACQLGSHS QDAALIAGIL VPLLLLLLAI ACCACCCWAA RLDPKDRPAR bmy_00173T0/1-870 SGACQLGSHS QDAALIVGIL VPLLLLLLAI ACCACCCWAA RLDPKDRPAR ENSTTRP00000006493/1-639 SGACQLGSHG QDAALLAGIL VPLLLLLLAI ACCACCCWAA RLDPKDRPAR 551 600 ENSP00000263071/1-830 DGATVSRMKL QVWGTLT-SL GSTLPCRSLS SHKLPWVTVS HHDPEVPFNH ENSBTAP00000015261/1-841 DGTAMSRMKL RVWGALTSSL GSALPCGPLS SHKLPWVTVS HHDPEIPFNH BACU010460/1-884 DGTAMSRMKL QVWGALTSSL GSALPCGSLS SHKLPWVTVS HHDPEIPFNH bmy_00173T0/1-870 DGTAMSRMKL QVWGALTSSL GSALPCGSLS SHKLPWVTVS HHDPEIPFNH ENSTTRP00000006493/1-639 DGTAMSRMKL QVWGALTSSL GSALPCGSLS SHKLPWVTVS HHDPEIPFNH 601 650 ENSP00000263071/1-830 SFIEPPSAGW ATDDSFSSDP ESGEADEVPA YCVPPQEGMV PVAQAGSSEA ENSBTAP00000015261/1-841 SFIEPPSAGW ASDDSFSSDS ESGEEDEGPA YCVPPQEGMV PAVPAESSEA BACU010460/1-884 SFIEPPSAGW ASDDSFSTDP ESGEEDEGPA YCVPPQEGTV PVAQAESQEA bmy_00173T0/1-870 SFIEPPSAGW ASDDSFSTDP ESGEEDEGPA YCVPPQEGMV PVAQAESPEA ENSTTRP00000006493/1-639 SFIEAPSAGW ASDDSFSTDP ESGEEDEGPA YCVPPQEGMV PVAQAESPEA 651 700 ENSP00000263071/1-830 SLAAGAFPPP EDASTPFAIP RTSSLARAKR PSVSFAEGTK FAPQSRRSSG ENSBTAP00000015261/1-841 SLAGGPFPPP EDASTPFAIP RTSSLARAKR PSVSFAEGTK FAPQSRRGSG BACU010460/1-884 SLAGGPFPPP EDASTPFAIP RTSSLARAKR PSVSFAEGTK FAPQSCRGSG bmy_00173T0/1-870 SLAGGPFPPP EDASTPFAIP RTSSLARAKR PSVSFAEGTK FAPQSCRGSG ENSTTRP00000006493/1-639 SLTGGPFPPA EDASTPFAIP RTSSLARAKR PSVSFAEGTK FAPQSCRGSG 701 750 ENSP00000263071/1-830 ELSSPLRKPK RLSRGAQSGP EGREAEESTG PEEAEAPESF PAAASPGDSA ENSBTAP00000015261/1-841 ELSSPLRKPK RLSRGTQPGP ESQETEESTG P-QVETDGAP PGTASPRDSA BACU010460/1-884 ELSSPLRKPK RLSRGGQPGP ESQEAEESTG PEQAEMNGAP PGAASPRDSA bmy_00173T0/1-870 ELSSPLRKPK RLSRGGQPGP ESQEAEESTG PEQAEMNGAP PGAASPRDSA ENSTTRP00000006493/1-639 ELSSPLRKPK RLSRGGQPGP ESQEAEESTG PEQAEMNGAP PGAASP-DSA 751 800 ENSP00000263071/1-830 TGHRRPPLGG RTVAEHVEAI EGSVQESSGP VTTIYMLAGK PRGSEGPVRS ENSBTAP00000015261/1-841 VGRRRLPLGG RTVAERVEAI EGSVQESSGS VTTIYMLAGT PRGPEGPVRS BACU010460/1-884 IGRRRLPLSG RTVAERVEAI EGSVQESAGS VTTIYMLAGT PRGSEGPVRS bmy_00173T0/1-870 IGRRRLPLSG RTVAERVEAI EGSVQESAGS VTTIYMLAGT PRGSEGPVRS ENSTTRP00000006493/1-639 TGRRRLPLSG RTVAER-EAI EGSVQESAGS V-TIYMLA-T PRGSEDV--G 801 850 ENSP00000263071/1-830 VFRHFGSFQK GQAEAKVKRA IPKPPRQALN RKKGSPGLAS GSVGQSPNSA ENSBTAP00000015261/1-841 VLRRFGSFQK GQAEPKVKSA IPKPPRRALS RNKDSPRLDS GSANQSPSSA BACU010460/1-884 VLRRFGSFQK GQAEPKVKSA IPKPPRRALS RNQGSPGLAC GSANQSSSSA bmy_00173T0/1-870 VLRRFGSFQK GQAEPKVKSA IPKPPRRALS RNKGSPGLAS GSANQSSSSA ENSTTRP00000006493/1-639 VLRR------ ---------- ---------- ---------- ---------- 851 900 ENSP00000263071/1-830 PKAGLPGATG PMAVRPEEAV RGLGAGTESS RRAQEPVSGC GSPEQDPQKQ ENSBTAP00000015261/1-841 MKEELTGALE SSGTGSEEGA RSLGGSIKSS EGGQELAPED GSLVQDPQKV BACU010460/1-884 PSEELTGALE SAGTGPEEVA SGLGDGIKSS GRGQELVPEG GPLEQDPQKL bmy_00173T0/1-870 PSEELTGALE SAGTGPEEVA RGLGDGIKSS GRGQELVPEG GPLEQDPQKL ENSTTRP00000006493/1-639 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000263071/1-830 AEEERQEEPE YENVVPISRP PEP ENSBTAP00000015261/1-841 ADKEGQEEPQ YENVVPISGP LEP BACU010460/1-884 ADEEGQEEPQ YENVVLISGP PEP bmy_00173T0/1-870 ADEEGQEEPQ YENVVLISGP PEP ENSTTRP00000006493/1-639 ---------- ---------- ---