KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:45 2014 Check: 00 .. Name: ENSP00000370542/1-310 Len: 328 Check: 8184 Weight: 1.00 Name: ENSBTAP00000014810/1-311 Len: 328 Check: 7865 Weight: 1.00 Name: ENSTTRP00000004592/1-295 Len: 328 Check: 1777 Weight: 1.00 Name: bmy_15716T0/1-297 Len: 328 Check: 3295 Weight: 1.00 Name: BACU010254/1-307 Len: 328 Check: 35 Weight: 1.00 // 1 50 ENSP00000370542/1-310 MRRAALWLWL CALALSLQPA LPQIVATNLP PEDQDGSGDD SDNFSGSGAG ENSBTAP00000014810/1-311 MRRAALWLWL CALALRLQPA LLHSVAVNMP PEDQDGSGDD SDNFSGSGAG ENSTTRP00000004592/1-295 MRRPALWLWL CALALRLQ-- ---------- PALPEIFVNA LPDFD---VS bmy_15716T0/1-297 ---------- -MDVLSFLP- -QQTVAINVP PEDQDGSGDD SDNFSGSGAG BACU010254/1-307 ---------- -------MHV LRQTVAINVP PEDQDGSGDD SDNFSGSGAG 51 100 ENSP00000370542/1-310 ALQDITLSQQ TPSTWKDTQL LTAIPTSPEP TGLEATA--- ---------- ENSBTAP00000014810/1-311 ALPDIT-SSH TPSTWKDLGP VTTTATAPEP TSPDAIA--- ---------- ENSTTRP00000004592/1-295 ALPDITVSQQ TPSTWKDKGL LTATPTAPEP SRPDTTV--- ---------- bmy_15716T0/1-297 ALPDITMSQQ TPSTWKDKGL LTAMPTAPEP SRPDTTA--- ---------- BACU010254/1-307 ALPDITLSQQ TPSTWKDKGL LTAMPTAPEP SRPDTTATSI STSSTSTSAT 101 150 ENSP00000370542/1-310 -ASTSTLPAG EGPKEGEAVV LPEVEPGLTA REQEATPRPR ETTQLPTTHL ENSBTAP00000014810/1-311 -ASTTILPTG EQPEGGRAVL LAEVEPGLTA Q-KEATHPPS ETTLHPTTHS ENSTTRP00000004592/1-295 -TSTSILPTG EQPEGGGLVL LGELEPGLTA QEKEATHPPS GTTLHPTTHR bmy_15716T0/1-297 -TSTSILPTG EQPEEGGVVL LAEVEPGLTA QEKEATHPPS ETTLHPTTHR BACU010254/1-307 STSTSILPTG EQPEEGGVVL LAEVEPGLTA QEKEATHPPS ETTLHPTTHR 151 200 ENSP00000370542/1-310 ASTTTATTAQ EP-ATSHPHR DMQPGHHETS TPAGPSQADL HTPHTEDGGP ENSBTAP00000014810/1-311 VSTARATMAP GP-ATSHPHR DVQPDHHETS APTGRGRMEP HRPHVEEGGP ENSTTRP00000004592/1-295 ASTARATTAQ GPAATSHPHR DVQPDHHETS APTGHSQLEP QAPSVEDGAS bmy_15716T0/1-297 ASTARATTAQ GP-ATSHPHR DVQPDHHETA APTGHGQPEP QAPSVEDRGS BACU010254/1-307 ASTARATTAQ GP-ATSHPHR DVQPDHHETS APTGHSQPEP QAPSVEDGGS 201 250 ENSP00000370542/1-310 SATERAAEDG ASSQLPAAEG SGEQDFTFET SGENTAVVAV EPDRRNQSPV ENSBTAP00000014810/1-311 PATEKAAEED PSTQIPVGEG SGEQDFTFDL SGENAAGAAG EPGSRNGAPE ENSTTRP00000004592/1-295 ATTEKAAEGE APTQLPEGEG SGEQDFTFDV SAENSAGATV EPGQRNVPPG bmy_15716T0/1-297 SATEKAAEDE ASTQLPEGED SGEQDFTFDV SAENSAGVTV EPGQRNGPPG BACU010254/1-307 SATEKAAEDE ASTQLPGGED SGEQDFTFDV SAENSAGATV EPGQRNGPPG 251 300 ENSP00000370542/1-310 DQ---GATGA SQGLLDRKEV LGGVIAGGLV GLIFAVCLVG FMLYRMKKKD ENSBTAP00000014810/1-311 DPEATGATGA SQGLLDRKEV LGGVIAGGLV GLIFAVCLVG FMLYRMKKKD ENSTTRP00000004592/1-295 DP---GA-GA SQGFLDRKEV LGGVIAGGLV GLIFAVCLVG FMLYRMKKKD bmy_15716T0/1-297 DP---GDTGA SQGLLDRKEV LGGVIAGGLV GLIFAVCLVG FMLYRMKKKD BACU010254/1-307 DP---GATGA SQGLLDRKEV LGGVIAGGLV GLIFAVCLVG FMLYRMKKKD 301 350 ENSP00000370542/1-310 EGSYSLEEPK QANGGAYQKP TKQEEFYA ENSBTAP00000014810/1-311 EGSYSLEEPK QANGGAYQKP TKQEEFYA ENSTTRP00000004592/1-295 EGSYSLEEPK QANGGAYQKP SKQEEFYA bmy_15716T0/1-297 EGSYSLEEPK QANGGAYQKP SKQEEFYA BACU010254/1-307 EGSYSLEEPK QANGGAYQKP SKQEEFYA