KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:30 2014 Check: 00 .. Name: ENSP00000378704/1-836 Len: 841 Check: 3673 Weight: 1.00 Name: ENSBTAP00000014704/1-803 Len: 841 Check: 5836 Weight: 1.00 Name: ENSTTRP00000004025/1-803 Len: 841 Check: 6348 Weight: 1.00 Name: bmy_14318T0/1-683 Len: 841 Check: 9298 Weight: 1.00 Name: BACU012232/1-806 Len: 841 Check: 8986 Weight: 1.00 // 1 50 ENSP00000378704/1-836 ---MLQNVTP HNKLPGEGNA GLLGLGPEAA APGKRIRKPS LLYEGFESPT ENSBTAP00000014704/1-803 ---MLQNVTP HNKLPGEGNA GLLGLGPEAA APGKRIRKPS LLYEGFESPT ENSTTRP00000004025/1-803 ---MLQNVTP HNKLPGEGNA GLLGLGPEAA APGKRIRKPS LLYEGFESPT bmy_14318T0/1-683 ---------- ---------- ---------- ---------- ---------- BACU012232/1-806 MDQPLRGEDS EPWLPGEGNA GLLGLGPEAA APGKRIRKPS LLYEGFESPT 51 100 ENSP00000378704/1-836 MASVPALQLT PANPPPPEVS NPKKPGRVTN QLQYLHKVVM KALWKHQFAW ENSBTAP00000014704/1-803 MASVPALQLT PANPPPPEVS NPKKPGRVTN QLQYLHKVVM KALWKHQFAW ENSTTRP00000004025/1-803 MASVPALQLT PANPPPPEVS NPKKPGRVTN QLQYLHKVVM KALWKHQFAW bmy_14318T0/1-683 ---------- ---------- ---------- ---------- ---------- BACU012232/1-806 MASVPALQLT PANPPPPEVS NPKKPGRVTN QLQYLHKVVM KALWKHQFAW 101 150 ENSP00000378704/1-836 PFRQPVDAVK LGLPDYHKII KQPMDMGTIK RRLENNYYWA ASECMQDFNT ENSBTAP00000014704/1-803 PFRQPVDAVK LGLPDYHKII KQPMDMGTIK RRLENNYYWA ASECMQDFNT ENSTTRP00000004025/1-803 PFRQPVDAVK LGLPDYHKII KQPMDMGTIK RRLENNYYWA ASECMQDFNT bmy_14318T0/1-683 ---------- ---------- ---MDMGTIK RRLENNYYWA ASECMQDFNT BACU012232/1-806 PFRQPVDAVK LGLPDYHKII KQPMDMGTIK RRLENNYYWA ASECMQDFNT 151 200 ENSP00000378704/1-836 MFTNCYIYNK PTDDIVLMAQ TLEKIFLQKV ASMPQEEQEL VVTIPKNSHK ENSBTAP00000014704/1-803 MFTNCYIYNK PTDDIVLMAQ TLEKIFLQKV ASMPQEEQEL VVTIPKNSHK ENSTTRP00000004025/1-803 MFTNCYIYNK PTDDIVLMAQ TLEKIFLQKV ASMPQEEQEL VVTIPKNSHK bmy_14318T0/1-683 MFTNCYIYNK PTDDIVLMAQ TLEKIFLQKV ASMPQEEQEL VVTIPKNSHK BACU012232/1-806 MFTNCYIYNK PTDDIVLMAQ TLEKIFLQKV ASMPQEEQEL VVTIPKNSHK 201 250 ENSP00000378704/1-836 KGAKLAALQG SVTSAHQVPA VSSVSHTALY TPPPEIPTTV LNIPHPSVIS ENSBTAP00000014704/1-803 KGAKLAALQG SITSAHQVPA VSSVSHTALY TPPPEIPTTV LNIPHPSVIS ENSTTRP00000004025/1-803 KGAKLAALQG SITSAHQVPA VSSVSHTALY TPPPEIPTTV LNIPHPSVIS bmy_14318T0/1-683 KGAKLAALQG SITSAHQVPA VSSVSHTALY TPPPEIPTTV LNIPHPSVIS BACU012232/1-806 KGAKLAALQG SITSAHQVPA VSSVSHTALY TPPPEIPTTV LNIPHPSVIS 251 300 ENSP00000378704/1-836 SPLLKSLHSA GPPLLAVTAA PPAQPLAKKK GVKRKADTTT PTPTAILAPG ENSBTAP00000014704/1-803 SPLLKSLHSA GPPLLAVSAA PPAQPLAKKK GVKRKADTTT PTPTAILAPG ENSTTRP00000004025/1-803 SPLLKSLHSA GPPLLAVSAA PPAQPLAKKK GVKRKADTTT PTPTAILAPG bmy_14318T0/1-683 SPLLKSLHSA GPPLLAVSAA PPAQPLAKKK GVKRKADTTT PTPTAILAPG BACU012232/1-806 SPLLKSLHSA GPPLLAVSAA PPAQPLAKKK GVKRKADTTT PTPTAILAPG 301 350 ENSP00000378704/1-836 SPASPPGSLE PKAARLPPMR RESGRPIKPP RKDLPDSQQQ HQSSKKGKLS ENSBTAP00000014704/1-803 SPASPPGGLE PKAARLPPVR RESGRPIKPP RKDLPDSQQQ HQSSKKGKLS ENSTTRP00000004025/1-803 SPASPPGGLE PKAARLPPMR RESGRPIKPP RKDLPDSQQQ HQSSKKGKLS bmy_14318T0/1-683 SPASPPGGLE PKAARLPPMR RESGRPIKPP RKDLPDSQQQ HQSSKKGKLS BACU012232/1-806 SPASPPGGLE PKAARLPPMR RESGRPIKPP RKDLPDSQQQ HQSSKKGKLS 351 400 ENSP00000378704/1-836 EQLKHCNGIL KELLSKKHAA YAWPFYKPVD ASALGLHDYH DIIKHPMDLS ENSBTAP00000014704/1-803 EQLKHCNGIL KELLSKKHAA YAWPFYKPVD ASALGLHDYH DIIKHPMDLS ENSTTRP00000004025/1-803 EQLKHCNGIL KELLSKKHAA YAWPFYKPVD ASALGLHDYH DIIKHPMDLS bmy_14318T0/1-683 EQLKHCNGIL KELLSKKHAA YAWPFYKPVD ASALGLHDYH DIIKHPMDLS BACU012232/1-806 EQLKHCNGIL KELLSKKHAA YAWPFYKPVD ASALGLHDYH DIIKHPMDLS 401 450 ENSP00000378704/1-836 TVKRKMENRD YRDAQEFAAD VRLMFSNCYK YNPPDHDVVA MARKLQDVFE ENSBTAP00000014704/1-803 TVKRKMENRD YRDAQEFAAD VRLMFSNCYK YNPPDHDVVA MARKLQDVFE ENSTTRP00000004025/1-803 TVKRKMENRD YRDAQEFAAD VRLMFSNCYK YNPPDHDVVA MARKLQDVFE bmy_14318T0/1-683 TVKRKMENRD YRDAQEFAAD VRLMFSNCYK YNPPDHDVVA MARKLQDVFE BACU012232/1-806 TVKRKMENRD YRDAQEFAAD VRLMFSNCYK YNPPDHDVVA MARKLQDVFE 451 500 ENSP00000378704/1-836 FRYAKMPDEP LEPGPLPVST AMPPGLAKSS SESSSEESSS ESSSEEEEEE ENSBTAP00000014704/1-803 FRYAKMPDEP LEPGPLPVST ALPPGLAKSS SESSSEESSS ESSSEEEEEE ENSTTRP00000004025/1-803 FRYAKMPDEP LEPGPLPVST ALAPGLAKSS SESSSEESSS ESSSEEEEEE bmy_14318T0/1-683 FRYAKMPDEP LEPGPLPVST ALPPGLAKSS SESSSEESSS ESSSEEEEEE BACU012232/1-806 FRYAKMPDEP LEPGPLPVST ALPPGLAKSS SESSSEESSS ESSSEEEEEE 501 550 ENSP00000378704/1-836 DEED-EEEEE SESSDSEEER AHRLAELQEQ LRAVHEQLAA LSQGPISKPK ENSBTAP00000014704/1-803 DEDEEEEEEE SESSDSEEER AHRLAELQEQ LRAVHEQLAA LSQGPISKPK ENSTTRP00000004025/1-803 DEEDEEEEEE SESSDSEEER AHRLAELQEQ LRAVHEQLAA LSQGPISKPK bmy_14318T0/1-683 DEEDEEEEEE SESSDSEEER AHRLAELQEQ LRAVHEQLAA LSQGPISKPK BACU012232/1-806 DEEDEEEEEE SESSDSEEER AHRLAELQEQ LRAVHEQLAA LSQGPISKPK 551 600 ENSP00000378704/1-836 RKREKKEKKK KRKAEKHRGR AGADEDDKGP RAPRPPQPKK SKKASGSG-G ENSBTAP00000014704/1-803 RKREKKEKKK KRKAEKHRGR AGADEDDKGP RAPRPSQPKK SKKAGGGGSS ENSTTRP00000004025/1-803 RKREKKEKKK KRKAEKHRGR AGVEEDDKGP RAPRPSQPKK SKKASGSGAG bmy_14318T0/1-683 RKREKKEKKK KRKAEKHRGR AGVEEDDKGP RAPRPSQPKK SKKASGSGAG BACU012232/1-806 RKREKKEKKK KRKAEKHRGR AGVEEDDKGP RAPRPSQPKK SKKASGSGAG 601 650 ENSP00000378704/1-836 GSAALGPSGF GPSGGSGTKL QAGVQWRDLG LLQPPLLGFK RFSCLSLPSS ENSBTAP00000014704/1-803 GAATLGPPGF GPSGGGATK- ---------- ---------- ---------- ENSTTRP00000004025/1-803 SAATLGPPGF GPSGGSSTK- ---------- ---------- ---------- bmy_14318T0/1-683 SAATLGPPGF GTSGGSSTK- ---------- ---------- ---------- BACU012232/1-806 SAATLGPPGF GTSGGSSTK- ---------- ---------- ---------- 651 700 ENSP00000378704/1-836 QDYRLPKKAT KTAPPALPTG YDSEEEEESR PMSYDEKRQL SLDINKLPGE ENSBTAP00000014704/1-803 ----LPKKAT KTAPPALPAG YDSEEEEESR PMSYDEKRQL SLDINKLPGE ENSTTRP00000004025/1-803 ----LPKKAT KTAPPALPAG YDSEEEEESR PMSYDEKRQL SLDINKLPGE bmy_14318T0/1-683 ----LPKKAT KTAPPALPAG YDSEEEEESR PMSYDEKRQL SLDINKLPGE BACU012232/1-806 ----LPKKAT KTAPPALPAG YDSEEEEESR PMSYDEKRQL SLDINKLPGE 701 750 ENSP00000378704/1-836 KLGRVVHIIQ AREPSLRDSN PEEIEIDFET LKPSTLRELE RYVLSCLRKK ENSBTAP00000014704/1-803 KLGRVVHIIQ AREPSLRDSN PEEIEIDFET LKPSTLRELE RYVLSCLRKK ENSTTRP00000004025/1-803 KLGRVVHIIQ AREPSLRDSN PEEIEIDFET LKPSTLRELE RYVLSCLRKK bmy_14318T0/1-683 KLGRVVHIIQ AREPSLRDSN PEEIEIDFET LKPSTLRELE RYVLSCLRKK BACU012232/1-806 KLGRVVHIIQ AREPSLRDSN PEEIEIDFET LKPSTLRELE RYVLSCLRKK 751 800 ENSP00000378704/1-836 PRKPYTIKKP VGKTKEELAL EKKRELEKRL QDVSGQLNST KKPPKKANEK ENSBTAP00000014704/1-803 PRKPYTIKKP VGKTKEELAL EKKRELEKRL QDVSGQLNST KKPPKKASEK ENSTTRP00000004025/1-803 PRKPYTIKKP VGKTKEELAL EKKRELEKRL QDVSGQLNST KKPPKKASEK bmy_14318T0/1-683 PRKPYTIKKP VGKTKEELAL EKKRELEKRL QDVSGQLNST KKPPKKASEK BACU012232/1-806 PRKPYTIKKP VGKTKEELAL EKKRELEKRL QDVSGQLNST KKPPKKASEK 801 850 ENSP00000378704/1-836 TESSSAQQVA VSRLSASSSS SDSSSSSSSS SSSDTSDSDS G ENSBTAP00000014704/1-803 TETSSAQQVA VSRLSASSSS SDSSSSSSSS SSSDTSDSDS G ENSTTRP00000004025/1-803 AETSSAQQVA VSRLSASSSS SDSSSSSSSS SSSDTSDSDS G bmy_14318T0/1-683 TETSSAQQVA VSRLSASSSS SDSSSSSSSS SSSDTSDSDS G BACU012232/1-806 TETSSAQQVA VSRLSASSSS SDSSSSSSSS SSSDTSDSDS G