KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:17 2014 Check: 00 .. Name: ENSP00000428056/1-724 Len: 732 Check: 8861 Weight: 1.00 Name: ENSTTRP00000015369/1-732 Len: 732 Check: 6334 Weight: 1.00 Name: BACU020419/1-732 Len: 732 Check: 6764 Weight: 1.00 Name: ENSBTAP00000014594/1-724 Len: 732 Check: 8183 Weight: 1.00 Name: bmy_14351T0/1-424 Len: 732 Check: 4260 Weight: 1.00 // 1 50 ENSP00000428056/1-724 MSAEGYQYRA LYDYKKEREE DIDLHLGDIL TVNKGSLVAL GFSDGQEARP ENSTTRP00000015369/1-732 MSAEGYQYRA LYDYKKEREE DIDLHLGDVL TVNKGSLVAL GFSDGQEARP BACU020419/1-732 MSAEGYQYRA LYDYKKEREE DIDLHLGDVL TVNKGSLVAL GFSDGQEARP ENSBTAP00000014594/1-724 MSAEGYQYRA LYDYKKEREE DIDLHLGDIL TVNKGSLVAL GFSDGQEAKP bmy_14351T0/1-424 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000428056/1-724 EEIGWLNGYN ETTGERGDFP GTYVEYIGRK KISPPTPKPR PPRPLPVAPG ENSTTRP00000015369/1-732 EEIGWLNGYN ETTGERGDFP GTYVEYIGRK KISPPTPKPR PPRPLPVAPG BACU020419/1-732 EEIGWLNGYN ETTGERGDFP GTYVEYIGRK KISPPTPKPR PPRPLPVAPG ENSBTAP00000014594/1-724 EEIGWLNGYN ETTGERGDFP GTYVEYIGRK KISPPTPKPR PPRPLPVAPG bmy_14351T0/1-424 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000428056/1-724 SSKTEADVEQ QALTLPDLAE QFAPPDIAPP LLIKLVEAIE KKGLECSTLY ENSTTRP00000015369/1-732 SSKTEADSEQ QASTLPDLAE QFAPPDVAPP LLIKLVEAIE KKGLECSTLY BACU020419/1-732 SSKTEADSEQ QASTLPDLAE QFAPPDVAPL LLIKLVEAIE KKGLECPTLY ENSBTAP00000014594/1-724 PSKTEADSEQ QASTLPDLAE QFAPPDVAPP LLIKLVEAIE KKGLECSTLY bmy_14351T0/1-424 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000428056/1-724 RTQSSSNLAE LRQLLDCDTP SVDLEMIDVH VLADAFKRYL LDLPNPVIPA ENSTTRP00000015369/1-732 RTQSSGNPAE LRQLLDCDAA SVDLEMIDVH VLADAFKRYL LDLPNPVIPV BACU020419/1-732 RTQSSSNPAE LRQLLDCDAA SVDLEMIDVH VLADAFKRYL LDLPNPVIPV ENSBTAP00000014594/1-724 RTQSSSNPAE LRQLLDCDTA SLDLEMFDVH VLADAFKRYL LDLPNPVIPV bmy_14351T0/1-424 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000428056/1-724 AVYSEMISLA PEVQSSEEYI QLLKKLIRSP SIPHQYWLTL QYLLKHFFKL ENSTTRP00000015369/1-732 AIYNEMVSLA PEVQSSEEYI QLLKKLIRSP SIPHQYWLTL QYLLKHFFKL BACU020419/1-732 AIYNEMVSLA PEVQSSEEYI QLLKKLIRSP SIPHQYWLTL QYLLKHFFKL ENSBTAP00000014594/1-724 AVSSELISLA PEVQSSEEYI QLLKKLIRSP SIPHQYWLTL QYLLKHFFKL bmy_14351T0/1-424 ---------- ---------- ---------- ------MHNL Q--------- 251 300 ENSP00000428056/1-724 SQTSSKNLLN ARVLSEIFSP MLFRFSAASS DNTENLIKVI EILISTEWNE ENSTTRP00000015369/1-732 SQTSSKNLLN ARVLSELFSP LLFRFPAASY ENPEHLIKVI EILISTEWNE BACU020419/1-732 SQTSSKNLLN ARVLSELFSP LLFRFPAASS ENTEHLIKVT EILISTEWNE ENSBTAP00000014594/1-724 SQTSSKNLLN ARVLSELFSP LLFRFPAASS ENTEHLIKII EILISTEWNE bmy_14351T0/1-424 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000428056/1-724 RQPAPALPPK PPKPTTVANN GMNNNMSLQD AEWYWGDISR EEVNEKLRDT ENSTTRP00000015369/1-732 RQPAPALPPK PPKPTTVANN GMNNNMSLQD AEWYWGDISR EEVNEKLRDT BACU020419/1-732 RQPAPALPPK PPKPTTVANN GMNNNMSLQD AEWYWGDISR EEVNEKLRDT ENSBTAP00000014594/1-724 RQPAPALPPK PPKPTTVANN GMNNNMSLQD AEWYWGDISR EEVNEKLRDT bmy_14351T0/1-424 -----TLPPK PPKPTTVANN GMNNNMSLQD AEWYWGDISR EEVNEKLRDT 351 400 ENSP00000428056/1-724 ADGTFLVRDA STKMHGDYTL TLRKGGNNKL IKIFHRDGKY GFSDPLTFSS ENSTTRP00000015369/1-732 ADGTFLVRDA STKMHGDYTL TLRKGGNNKL IKIFHRDGKY GFSDPLTFNS BACU020419/1-732 ADGTFLVRDA STKMHGDYTL TLRKGGNNKL IKIFHRDGKY GFSDPLTFNS ENSBTAP00000014594/1-724 ADGTFLVRDA STKMHGDYTL TLRKGGNNKL IKIFHRDGKY GFSDPLTFNS bmy_14351T0/1-424 ADGTFLVRDA STKMHGDYTL TLRKGGNNKL IKIFHRDGKY GFSDPLTFNS 401 450 ENSP00000428056/1-724 VVELINHYRN ESLAQYNPKL DVKLLYPVSK YQQDQVVKED NIEAVGKKLH ENSTTRP00000015369/1-732 VVELINHYRN ESLAQYNPKL DVKLLYPVSK YQQDQVVKED NIEAVGKKLH BACU020419/1-732 VVELINHYRN ESLAQYNPKL DVKLLYPVSK YQQDQVVKED NIEAVGKKLH ENSBTAP00000014594/1-724 VVELINHYRN ESLAQYNPKL DVKLLYPVSK YQQDQVVKED NIEAVGKKLH bmy_14351T0/1-424 VVELINHYRN ESLAQYNPKL DVKLLYPVSK YQQDQVVKED NIEAVGKKLH 451 500 ENSP00000428056/1-724 EYNTQFQEKS REYDRLYEEY TRTSQEIQMK RTAIEAFNET IKIFEEQCQT ENSTTRP00000015369/1-732 EYNTQFQEKS REYDRLYEDY TRTSQEIQMK RTAIEAFNET IKIFEEQCQT BACU020419/1-732 EYNTQFQEKS REYDRLYEDY TRTSQEIQMK RTAIEAFNET IKIFEEQCQT ENSBTAP00000014594/1-724 EYNTQFQEKS REYDRLYEDY TRTSQEIQMK RTAIEAFNET IKIFEEQCQT bmy_14351T0/1-424 EYNTQFQEKS REYDRLYEDY TRTSQEIQMK RTAIEAFNET IKIFEEQCQT 501 550 ENSP00000428056/1-724 QERYSKEYIE KFKREGNEKE IQRIMHNYDK LKSRISEIID SRRRLEEDLK ENSTTRP00000015369/1-732 QERYSKEYIE KFKREGNEKE IQRIMHNYEK LKSRISEIVD SRRRLEEDLK BACU020419/1-732 QERYSKEYIE KFKREGNEKE IQRIMHNYEK LKSRISEIVD SRRRLEEDLK ENSBTAP00000014594/1-724 QERYSKEYIE KFKREGNETE IQRIMHNYEK LKSRISEIVD SRRRLEEDLK bmy_14351T0/1-424 QERYSKEYIE KFKREGNEKE IQRIMHNYEK LKSRISEIVD SRRRLEEDLK 551 600 ENSP00000428056/1-724 KQAAEYREID KRMNSIKPDL IQLRKTRDQY LMWLTQKGVR QKKLNEWLGN ENSTTRP00000015369/1-732 KQAAEYREID KRMNSIKPDL IQLRKTRDQY LMWLTQKGVR QKKLNEWLGN BACU020419/1-732 KQAAEYREID KRMNSIKPDL IQLRKTRDQY LMWLTQKGVR QKKLNEWLGN ENSBTAP00000014594/1-724 KQAAEYREID KRMNSIKPDL IQLRKTRDQY LMWLTQKGVR QKKLNEWLGN bmy_14351T0/1-424 KQAAEYREID KRMNSIKPDL IQLRKTRDQY LMWLTQKGVR QKKLNEWLGN 601 650 ENSP00000428056/1-724 ENTED----- ---QYSLVED DEDLPHHDEK TWNVGSSNRN KAENLLRGKR ENSTTRP00000015369/1-732 ENTEENLLFY LCSQYSLVED DEDLPHHDEK TWNVGSSNRN KAENLLRGKR BACU020419/1-732 ENTEENLLFY LFSQYSLVED DEDLPHHDEK TWNVGSSNRN KAENLLRGKR ENSBTAP00000014594/1-724 ENTED----- ---QYSLVED DEDLPHHDEK TWNVGSSNRN KAENLLRGKR bmy_14351T0/1-424 ENTED----- ---QYSLVED DEDLPHHDEK TWNVGSSNRN KAENLLRGKR 651 700 ENSP00000428056/1-724 DGTFLVRESS KQGCYACSVV VDGEVKHCVI NKTATGYGFA EPYNLYSSLK ENSTTRP00000015369/1-732 DGTFLVRESS KQGCYACSVV VDGEVKHCVI NKTATGYGFA EPYNLYSSLK BACU020419/1-732 DGTFLVRESS KQGCYACSVV VDGEVKHCVI NKTATGYGFA EPYNLYSSLK ENSBTAP00000014594/1-724 DGTFLVRESS KQGCYACSVV VDGEVKHCVI NKTATGYGFA EPYNLYSSLK bmy_14351T0/1-424 DGTFLVRESS KQGCYACSVV VDGEVKHCVI NKTATGYGFA EPYNLYSSLK 701 750 ENSP00000428056/1-724 ELVLHYQHTS LVQHNDSLNV TLAYPVYAQQ RR ENSTTRP00000015369/1-732 ELVLHYQHTS LVQHNDSLNV TLAYPVYAQQ RR BACU020419/1-732 ELVLHYQHTS LVQHNDSLNV TLAYPVYAQQ RR ENSBTAP00000014594/1-724 ELVLHYQHTS LVQHNDSLNV TLAYPVYAQQ RR bmy_14351T0/1-424 ELVLHYQHTS LVQHNDSLNV TLAYPVYAQQ RR