KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:53:10 2014 Check: 00 .. Name: ENSP00000368920/1-347 Len: 420 Check: 4649 Weight: 1.00 Name: ENSBTAP00000014541/1-351 Len: 420 Check: 5885 Weight: 1.00 Name: ENSTTRP00000014737/1-222 Len: 420 Check: 4908 Weight: 1.00 Name: bmy_14065T0/1-418 Len: 420 Check: 3115 Weight: 1.00 Name: BACU020340/1-222 Len: 420 Check: 5610 Weight: 1.00 // 1 50 ENSP00000368920/1-347 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000014541/1-351 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014737/1-222 ---------- ---------- ---------- ---------- ---------- bmy_14065T0/1-418 EEAGGGNALG IRNPSSDFLS PWSLLPSGSL LGALELGAQC SDEPRGPEAV BACU020340/1-222 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000368920/1-347 ---------- ---------M ARFWVCVAGA GFFLAFLVLH SRFCGS--PV ENSBTAP00000014541/1-351 ---------- ---------M TRFWVCIAGA GFFLALLVLH SRFCASRLPP ENSTTRP00000014737/1-222 ---------- ---------M TRFWVCVAGA GFFLAFLIFH SRFCASR--- bmy_14065T0/1-418 RAAPSRLPIF LLCQDSCLVM ARFWVCVAGA GFFLAFLVFH SRFCASRLPL BACU020340/1-222 ---------- ---------M ARFWVCVAGA GFFLAFLVFH SRFCASR--- 101 150 ENSP00000368920/1-347 LRNFTFAVSW RTEKILYRLD VGWPKHPEYF TGTTFCVAVD SLNGLVYIGQ ENSBTAP00000014541/1-351 HLHLAFKISW RAEEILYRLD VDWPKYSEYF TGATFCVAVD SLNGLVYVGQ ENSTTRP00000014737/1-222 ---FAFKISW RPEEALYRLD VDWPKYSEYF TGATFCVAVD SLNGLVYVAQ bmy_14065T0/1-418 HLHLAFKFSW RAEEALYRLD VDWPKYSEYF TGATFCVAVD SLNGLVYVAQ BACU020340/1-222 ---VTFKISW RAEEALYRLD VDWPKYSEYF TGATFCVAVD SLNGLVYVAQ 151 200 ENSP00000368920/1-347 RGDNIPKILV FTEDGYFLRA WNYTVDTPHG IFAASTLYEQ SVWITDVGSG ENSBTAP00000014541/1-351 RGDNIPKVLV FTEDGYFLRS WNYTVDTPHG IFAASTPQEK SVWITDVGSG ENSTTRP00000014737/1-222 RGDNIPKVLV FTEDGYFLRA WNYTVDTPHG IFAASTPHEQ SVWITDVGSG bmy_14065T0/1-418 RGDNIPKVLV FTEDGYFLRA WNYTVDTPHG IFAASTPHEQ SVWITDVGSG BACU020340/1-222 RGDNIPKVLV FTEDGYFLRA WNYTVDTPHG IFAASTPHEQ SVWITDVGSG 201 250 ENSP00000368920/1-347 FFGHTVKKYS SFGDLVQVLG TPGKKGTSLN PLQFDNPAEL YVEDTGDIYI ENSBTAP00000014541/1-351 FYGHTIKKYN SFGDLVQVLG TPGKKGTGLN PLQFDNPAEL HVDDTGDIYI ENSTTRP00000014737/1-222 LYGHTIKKYN SFGDLVQVLG TPGKKGTGLN PLQFDNPAEL YVEDTGDIYI bmy_14065T0/1-418 LYGHTIKKYN SFGDLVQVLG TPGKKGTGLN PLQFDNPAEL YVEDTGDIYI BACU020340/1-222 LYGHTIKKYN SFGDLVQVLG TPGKKGTGLN PLQFDNPAEL YVEDTGDIYI 251 300 ENSP00000368920/1-347 VDGDGGLNNR LIKLSQDFMI LWLHGENGTG PAKFNIPHSV TLDSAGRVWV ENSBTAP00000014541/1-351 VDGDGGLNNR LIKLSQDFMI LWLRGENGTG PAKFNIPHSV TVDSTGRVWV ENSTTRP00000014737/1-222 VDGDGGLNNR LIKLSQDFMI LWLHGENGTG PAKFSIPHSV TVDSDGR--- bmy_14065T0/1-418 VDGDGGLNNR LIKLSQDFMI LWLHGENGTG PAKFSIPHSV TVDSDGRVWV BACU020340/1-222 VDGDGGLNNR LIKLSQDFMI LWLHGENGTG PAKFSIPHSV TVDSDGR--- 301 350 ENSP00000368920/1-347 ADRGNKRIQV FDKDTGEWLG AWNNCFTEEG PSSVRFTPDG KYLIVAQLNL ENSBTAP00000014541/1-351 ADRGNKRLQV FDKDTGDWLG EWKNCFSEEG PSAVRFTPDG KYVVVAQLNL ENSTTRP00000014737/1-222 ---------- ---------- ---------- ---------- ---------- bmy_14065T0/1-418 ADRGNKRIQV FDKDTGEWLG AWNNCFSEEG PSAVRFTPDG KRLIVAQLHL BACU020340/1-222 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000368920/1-347 SRLSVVAAPP VGSIGECSVI STIQLADQVL PHLLEVDRKT GAVYVAEIGA ENSBTAP00000014541/1-351 SRLLILAAPP VGNIGDCFVV STIQLADQVS PHLLEVSRET GAVYVAEIGA ENSTTRP00000014737/1-222 ---------- ---------- ---------- ---------- ---------- bmy_14065T0/1-418 SRLLLVAAPP VGSIGDCSVT STIQLADQVS PHLLDVSGKT GAIYVAEIGA BACU020340/1-222 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000368920/1-347 KQVQKYVPLN SYVPSFGS-- ENSBTAP00000014541/1-351 KQVQKYIPVN SKLLERWDLD ENSTTRP00000014737/1-222 ---------- ---------- bmy_14065T0/1-418 KQVQKYVPVN SYFSSFGS-- BACU020340/1-222 ---------- ----------