KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:19 2014 Check: 00 .. Name: ENSTTRP00000009572/1-571 Len: 604 Check: 1313 Weight: 1.00 Name: bmy_00553T0/1-454 Len: 604 Check: 4768 Weight: 1.00 Name: ENSP00000262653/1-604 Len: 604 Check: 2687 Weight: 1.00 Name: BACU015560/1-557 Len: 604 Check: 4513 Weight: 1.00 Name: ENSBTAP00000013366/1-592 Len: 604 Check: 5376 Weight: 1.00 // 1 50 ENSTTRP00000009572/1-571 ---------- ---------- --GADKVPAM PASPVEV--- IQRSSPPMPP bmy_00553T0/1-454 ---------- ---------- ---------- ---------- ---------- ENSP00000262653/1-604 MAKESGISLK EIQVLARQWK VGPEKRVPAM PGSPVEVKIQ SRSSPPTMPP BACU015560/1-557 ---------- ---------- ---------M PGSPVEVKIQ SRSSPPTMPP ENSBTAP00000013366/1-592 ---------- --LPFLLFFT VGADKRVPAM PGSPVEVKIQ SRSSPPTMPP 51 100 ENSTTRP00000009572/1-571 LPP-NPGGPG PVSFTPTALS NGINHSPPTL NGAPSPPQRF SNGPASSTSS bmy_00553T0/1-454 ---------- ---------- -MLEHCPVL- ---------- ---------- ENSP00000262653/1-604 LPPINPGGPR PVSFTPTALS NGINHSPPTL NGAPSPPQRF SNGPASSTSS BACU015560/1-557 LPPINPGGPR PVSFTPTALS NGINHSPPTL NGAPSPPQRF SNGPASSTSS ENSBTAP00000013366/1-592 LPPINPGGPR PVSFTPTALS NGINHSPPTL NGAPSPPQRF SNGPASSTSS 101 150 ENSTTRP00000009572/1-571 ALTNQQLPAT CGARQLSKLK RFLTTLQQFG NDISPEIGEK VRTLVLALVN bmy_00553T0/1-454 ---------- ---------- ---------- ---------E VEQCYLSFQN ENSP00000262653/1-604 ALTNQQLPAT CGARQLSKLK RFLTTLQQFG NDISPEIGEK VRTLVLALVN BACU015560/1-557 ALTNQQLPAT CGARQLSKLK RFLTTLQQFG NDISPEIGEK VRTLVLALVN ENSBTAP00000013366/1-592 ALTNQQLPAT CGARQLSKLK RFLTTLQQFG NDISPEIGEK VRTLVLALVN 151 200 ENSTTRP00000009572/1-571 STVTIEEFHC KLQEATNFPL RPFVIPFLKA NLPLLQRELL HCARAAKQTP bmy_00553T0/1-454 STVTIEEFHC KLQEATNFPL RPFVIPFLKA NLPLLQRELL HCARAAKQTP ENSP00000262653/1-604 STVTIEEFHC KLQEATNFPL RPFVIPFLKA NLPLLQRELL HCARAAKQTP BACU015560/1-557 STVTIEEFHC KLQEATNFPL RPFVIPFLKA NLPLLQRELL HCARAAKQTP ENSBTAP00000013366/1-592 STVTIEEFHC KLQEATNFPL RPFVIPFLKA NLPLLQRELL HCARAAKQTP 201 250 ENSTTRP00000009572/1-571 SQYLAQHEHL LLNTSIASPA DSSELLMEVH GNGKRPSPER REESSFERET bmy_00553T0/1-454 SQYLAQHEHL LLNTSIASPA DSSELLMEVH GNGKRPSPE- ---------- ENSP00000262653/1-604 SQYLAQHEHL LLNTSIASPA DSSELLMEVH GNGKRPSPER REENSFDRDT BACU015560/1-557 SQYLAQHEHL LLNTSIASPA DSSELLMEVH GNGKRPSPER REESSFERDT ENSBTAP00000013366/1-592 SQYLAQHEHL LLNTSIASPA DSSELLMEVH GNGKRPSPER REESSFERDA 251 300 ENSTTRP00000009572/1-571 VPPEPPAKRV CTISPAPRHS PALTVPLMNP GGQFHPTPPP LQHYTLEDIA bmy_00553T0/1-454 --------RV CTISPAPRHS PALTVPLMNP GGQFHPTPPP LQHYTLEDIA ENSP00000262653/1-604 IAPEPPAKRV CTISPAPRHS PALTVPLMNP GGQFHPTPPP LQHYTLEDIA BACU015560/1-557 IPPEPPAKRV CTISPAPRHS PALTVPLMNP GGQFHPTPPP LQHYTLEDIA ENSBTAP00000013366/1-592 IAPEPPAKRV CTISPAPRHS PALTVPLMNP GGQFHPTPPP LQHYTLEDIA 301 350 ENSTTRP00000009572/1-571 TSHLYREPNK MLEHREVRDR HHNLSLNGGY QDELVDHRLT EREWADEWKH bmy_00553T0/1-454 TSHLYREPNK MLEHREVRDR HHNLSLNGGY QDELVDHRLT EREWADEWKH ENSP00000262653/1-604 TSHLYREPNK MLEHREVRDR HHSLGLNGGY QDELVDHRLT EREWADEWKH BACU015560/1-557 TSHLYREPNK MLEHREVRDR HHNLSLNGGY QDELVDHRLT EREWADEWKH ENSBTAP00000013366/1-592 TSHLYREPSK MIEHREVRDR HHNLSLNGGY QDELVDHRLT EREWADEWKH 351 400 ENSTTRP00000009572/1-571 LDHXXXXXXX XXXXXXXXXX XXXRCQESDR EELNYWKRRY NENTEMRKTG bmy_00553T0/1-454 LDHALNCIME MVEKTRRSMA VLRRCQESDR EELNYWKRRY NENTEMRKTG ENSP00000262653/1-604 LDHALNCIME MVEKTRRSMA VLRRCQESDR EELNYWKRRY NENTELRKTG BACU015560/1-557 LDHALNCIME MVEKTRRSMA VLRRCQESDR EELNYWKRRY NENTEMRKTG ENSBTAP00000013366/1-592 LDHALNCIME MVEKTRRSMA VLRRCQESDR EELNYWKRRF NENTEMRKTG 401 450 ENSTTRP00000009572/1-571 SELVSRQHSP GSADSLSNDS QREFSSRPGT GYVPVEFWKK TEEAVNKVKI bmy_00553T0/1-454 SELVSRQHSP GSADSLSNDS QREFNSRPGT GYVPVEFWKK TEEAVNKVKI ENSP00000262653/1-604 TELVSRQHSP GSADSLSNDS QREFNSRPGT GYVPVEFWKK TEEAVNKVKI BACU015560/1-557 ---------- --------NS QREFNSRPGT GYVPVEFWKK TEEAVNKVKI ENSBTAP00000013366/1-592 SELVSRQHSP GSADSLSNDS QREFNSRPGT GYVPVEFWKK TEEAVNKVKI 451 500 ENSTTRP00000009572/1-571 QAMSEVQKAV AEAEQKAFEV IATERARMEQ TIADVKRQAA EDAFLVINEQ bmy_00553T0/1-454 QAMSEVQKAV AEAEQKAFEV IATERARMEQ TIADVKRQAA EDAFLVINEQ ENSP00000262653/1-604 QAMSEVQKAV AEAEQKAFEV IATERARMEQ TIADVKRQAA EDAFLVINEQ BACU015560/1-557 QAMSEVQKAV AEAEQKAFEV IATERARMEQ TIADVKRQAA EDAFLVINEQ ENSBTAP00000013366/1-592 QAMSEVQKAV AEAEQKAFEV IATERARMEQ TIADVKRQAA EDAFLVINEQ 501 550 ENSTTRP00000009572/1-571 EESTENCWNC GRKASETCSG CNIARYCGSF CQHKDWERHH RLCGQNLHGQ bmy_00553T0/1-454 EESTENCWNC GRKASETCSG CNIARYCGSF CQHKDWERHH RLCGQNLHGQ ENSP00000262653/1-604 EESTENCWNC GRKASETCSG CNIARYCGSF CQHKDWERHH RLCGQNLHGQ BACU015560/1-557 EESTENCWNC GRKASETCSG CNIARYCGSF CQHKDWERHH RLCGQNLHGQ ENSBTAP00000013366/1-592 EESTENCWNC GRKASETCSG CNIARYCGSF CQHKDWERHH RLCGQNLHGQ 551 600 ENSTTRP00000009572/1-571 SPHSQSRPLL PVGRGSSARS ADCSVPSPAL DKTSATTSRS STPASVT--- bmy_00553T0/1-454 SPHSQSRPLL PGGRGSAARS ADGSVPSPAL DKTSATTSRS STPASVTAID ENSP00000262653/1-604 SPHGQGRPLL PVGRGSSARS ADCSVPSPAL DKTSATTSRS STPASVTAID BACU015560/1-557 SPHSQSRPLL PGGRGSAARS ADGSVPSPAL DKTSATTSRS STPASVTAID ENSBTAP00000013366/1-592 SPHSQSRPLL PGGRGSSARS ADCSVPSPAL DKTSATTSRS STPASVTAID 601 650 ENSTTRP00000009572/1-571 ---- bmy_00553T0/1-454 TSGL ENSP00000262653/1-604 TNGL BACU015560/1-557 TSGL ENSBTAP00000013366/1-592 TNGL