KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:17 2014 Check: 00 .. Name: ENSP00000252486/1-317 Len: 317 Check: 9493 Weight: 1.00 Name: ENSBTAP00000013354/1-316 Len: 317 Check: 6773 Weight: 1.00 Name: ENSTTRP00000008256/1-316 Len: 317 Check: 8994 Weight: 1.00 Name: bmy_15580T0/1-236 Len: 317 Check: 5847 Weight: 1.00 Name: BACU002095/1-313 Len: 317 Check: 684 Weight: 1.00 // 1 50 ENSP00000252486/1-317 MKVLWAALLV TFLAGCQAKV EQAVETEPEP ELRQQTEWQS GQRWELALGR ENSBTAP00000013354/1-316 MKVLWVAVVV ALLAGCQADM EGELGPE-EP LTTQQPRGKD SQPWEQALGR ENSTTRP00000008256/1-316 MKVLWVALVI TLLAGCQAEV EPEPEPE-VQ LGREWPRWQG SQPWEQALGR bmy_15580T0/1-236 ---------- ---------- ---------- ---------- ---------- BACU002095/1-313 MKVLWVALVI TLLAGCQAEV EPEPEPE-VQ LGREWPGWQG SQPWEQALGR 51 100 ENSP00000252486/1-317 FWDYLRWVQT LSEQVQEELL SSQVTQELRA LMDETMKELK AYKSELEEQL ENSBTAP00000013354/1-316 FWDYLRWVQT LSDQVQEELL NTQVIQELTA LMEETMKEVK AYKEELEGQL ENSTTRP00000008256/1-316 FWDYLRWVQT LSDQVQEELL STQVIQELTV LMDETMKEVK AYREELEGQL bmy_15580T0/1-236 ---------- ---------- ---------- -MDETMKEVK AYREELEEQL BACU002095/1-313 FWDYLRWVQT LSDQVQEELL STQVIQELTV LMDETMKEVK AYREELEEQL 101 150 ENSP00000252486/1-317 TPVAEETRAR LSKELQAAQA RLGADMEDVC GRLVQYRGEV QAMLGQSTEE ENSBTAP00000013354/1-316 GPMAQETQAR VSKELQAAQA RLGSDMEDLR NRLAQYRSEV QAMLGQSTEE ENSTTRP00000008256/1-316 GPIAQETQAR VSKELQAAQA RLASDMEDVR SRVAQYRSEV QALMGQTTDE bmy_15580T0/1-236 GPIAQETQAR VSKELQAAQA RLASDMEDVR SRLAQYRSEV QAMMGQTTDE BACU002095/1-313 GPIAQETQAR VSKELQAAQA RLASDMEDVR SRLAQYRSEV QAVMGQTTDE 151 200 ENSP00000252486/1-317 LRVRLASHLR KLRKRLLRDA DDLQKRLAVY QAGAREGAER GLSAIRERLG ENSBTAP00000013354/1-316 LRARMASHLR KLRKRLLRDA DDLKKRLAVY QAGASEGAER SLSAIRERFG ENSTTRP00000008256/1-316 LRGRLASHLR KLRKRLLRDA EDLQKRLVVY RAGALEGSER SVSAIRERLG bmy_15580T0/1-236 LRGRLASHLR KLRKRLLRDA EDLQKRLAVY RAGALEGSER SVSAIRERLG BACU002095/1-313 LRGRLASHLR KLRKRLLRDA EDLQKRLAVY RAGAVEGSER SVSAIRERLG 201 250 ENSP00000252486/1-317 PLVEQGRVRA ATVGSLAGQP LQERAQAWGE RLRARMEEMG SRTRDRLDEV ENSBTAP00000013354/1-316 PLVEQGQSRA ATLSTLAGQP LLERAEAWRQ KLHGRLEEVG VRAQDRLDKI ENSTTRP00000008256/1-316 PLVEQGRVRA ATVGTLASQT LRERAEAWHQ KLRGRMEEMG TQARDHLEEM bmy_15580T0/1-236 PLMEQGRARA ATVGTLASQT LRERAEAWHQ KLRGRVEEVG TQARDHLEEM BACU002095/1-313 PLMEKGRGRA ---GTLASQT LRERAEAWHQ KLRGRVEEMG TQARDHLEEI 251 300 ENSP00000252486/1-317 KEQVAEVRAK LEEQAQQIRL QAEAFQARLK SWFEPLVEDM QRQWAGLVEK ENSBTAP00000013354/1-316 RQQLEEVHAK VEEQGNQMRL QAEAFQARLR SWFEPLVEDM QRQWAGLVEK ENSTTRP00000008256/1-316 REQLEEVRAK VEEQGSQMRL QAEAFQARLK SWFEPLVEDM QRQWAGLVEK bmy_15580T0/1-236 REQLEEVRAK VEEQGSQIRL QAEAFQARLK SWFEPLVEDM QRQWAGLVEK BACU002095/1-313 REQLEEVRAK VEEQGSQIRL QAEAFQARLK SWFEPLVEDM QRQWAGLVEK 301 350 ENSP00000252486/1-317 VQAAVGTSAA PVPSDNH ENSBTAP00000013354/1-316 VQLALRPSPT SPPSENH ENSTTRP00000008256/1-316 VQLAMATGPT SAPIENN bmy_15580T0/1-236 VQLAMATSST SAPSENH BACU002095/1-313 VQLAMATSST SAPSENH