KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:22 2014 Check: 00 .. Name: ENSTTRP00000010863/1-1211 Len: 1310 Check: 4734 Weight: 1.00 Name: ENSP00000378402/1-1273 Len: 1310 Check: 3089 Weight: 1.00 Name: ENSBTAP00000013167/1-1274 Len: 1310 Check: 3979 Weight: 1.00 Name: bmy_01510T0/1-1252 Len: 1310 Check: 6282 Weight: 1.00 Name: BACU017889/1-1310 Len: 1310 Check: 9718 Weight: 1.00 // 1 50 ENSTTRP00000010863/1-1211 ---------- ---------- ---------- ---------- ---------- ENSP00000378402/1-1273 ---------- ---------- ---------- -----MKRRL DDQESPVYAA ENSBTAP00000013167/1-1274 ---------- ---------- ---------- -----MKRRL DDQESPVYAA bmy_01510T0/1-1252 ---------- ---------- ---------- -----MKRRL DDQESPVYAA BACU017889/1-1310 MTDASTGEPM ARGGRSPPFS TPRLARKCIP EHECRMKRRL DDQESPVYAA 51 100 ENSTTRP00000010863/1-1211 ---------- ---------- ---------- ---------- --------VS ENSP00000378402/1-1273 QQRRIPGSTE AFPHQHRVLA PAPPVYEAVS ETMQSATGIQ YSVTPSYQVS ENSBTAP00000013167/1-1274 QQRRIPGSAE AFPHQHRVLA PAPPVYEAVS ETMQSATGIQ YSVTPSYQVS bmy_01510T0/1-1252 QQRRIPGSTE AFPHQHRVLA PAPPVYEAVS ETMQSATGIQ YSVTPSYQVS BACU017889/1-1310 QQRRIPGSTE AFPHQHRVLA PAPPVYEAVS ETMQSATGIQ YSVTPSYQVS 101 150 ENSTTRP00000010863/1-1211 AVPQSSGSHG PTIAAVHSSH HHPTAVQPHG GQVVQSHAHP APPVAPVQGQ ENSP00000378402/1-1273 AMPQSSGSHG PAIAAVHSSH HHPTAVQPHG GQVVQSHAHP APPVAPVQGQ ENSBTAP00000013167/1-1274 AVPQSSSSHG PTIAAVHSSH HHPTAVQPHG GQVVQSHAHP APPVAPVQGQ bmy_01510T0/1-1252 AVPQSSGSHG PTIAAVHSSH HHPTAVQPHG GQVVQSHAHP APPVAPVQGQ BACU017889/1-1310 AVPQSSGSHG PTIAAVHSSH HHPTAVQPHG GQVVQSHAHP APPVAPVQGQ 151 200 ENSTTRP00000010863/1-1211 QQFQRLK-VE DALSYLDQVK LQFGSQPQVY NDFLDIMKEF KSQSIDTPGV ENSP00000378402/1-1273 QQFQRLK-VE DALSYLDQVK LQFGSQPQVY NDFLDIMKEF KSQSIDTPGV ENSBTAP00000013167/1-1274 QQFQRLK-VE DALSYLDQVK LQFGSQPQVY NDFLDIMKEF KSQSIDTPGV bmy_01510T0/1-1252 QQFQRLKVVE DALSYLDQVK LQFGSQPQVY NDFLDIMKEF KSQSIDTPGV BACU017889/1-1310 QQFQRLKVVE DALSYLDQVK LQFGSQPQVY NDFLDIMKEF KSQSIDTPGV 201 250 ENSTTRP00000010863/1-1211 ISRVSQLFKG HPDLIMGFNT FLPPGYKIEV QTNDMVNVTT PGQVHQIPTH ENSP00000378402/1-1273 ISRVSQLFKG HPDLIMGFNT FLPPGYKIEV QTNDMVNVTT PGQVHQIPTH ENSBTAP00000013167/1-1274 ISRVSQLFKG HPDLIMGFNT FLPPGYKIEV QTNDMVNVTT PGQVHQIPTH bmy_01510T0/1-1252 ISRVSQLFKG HPDLIMGFNT FLPPGYKIEV QTNDMVNVTT PGQVHQIPTH BACU017889/1-1310 ISRVSQLFKG HPDLIMGFNT FLPPGYKIEV QTNDMVNVTT PGQVHQIPTH 251 300 ENSTTRP00000010863/1-1211 GIQPQPQPPP QHPSQPSAQS APAPAQPAPQ PPPAKVSKPS QLQAHTPASQ ENSP00000378402/1-1273 GIQPQPQPPP QHPSQPSAQS APAPAQPAPQ PPPAKVSKPS QLQAHTPASQ ENSBTAP00000013167/1-1274 GIQPQPQPPP QHPSQPSAQS APAPAQPAPQ PPPAKVSKPS QLQAHTPASQ bmy_01510T0/1-1252 GIQPQPQPPP QHPSQPSAXS APAPAQPAPQ PPPAKVSKPS QLQAHTPASQ BACU017889/1-1310 GIQPQPQPPP QHPSQPSAQS APAPAQPAPQ PPPAKVSKPS QLQAHTPASQ 301 350 ENSTTRP00000010863/1-1211 QTPPLPPYAS PRSPPVQPHT PVTISLGTAP PLQNNQPVEF NHAINYVNKI ENSP00000378402/1-1273 QTPPLPPYAS PRSPPVQPHT PVTISLGTAP SLQNNQPVEF NHAINYVNKI ENSBTAP00000013167/1-1274 QTPPLPPYAS PRSPPVQPHT PVTISLGTAP PLQNNQPVEF NHAINYVNKI bmy_01510T0/1-1252 QTPPLPPYAS PRSPPVQPHT PVTISLGTAP PLQNNQPVEF NHAINYVNKI BACU017889/1-1310 QTPPLPPYAS PRSPPVQPHT PVTISLGTAP PLQNNQPVEF NHAINYVNKI 351 400 ENSTTRP00000010863/1-1211 KNRFQGQPDI YKAFLEILHT YQKEQRNAKE AGGNYTPALT EQEVYAQVAR ENSP00000378402/1-1273 KNRFQGQPDI YKAFLEILHT YQKEQRNAKE AGGNYTPALT EQEVYAQVAR ENSBTAP00000013167/1-1274 KNRFQGQPDI YKAFLEILHT YQKEQRNAKE AGGNYTPALT EQEVYAQVAR bmy_01510T0/1-1252 KNRFQGQPDI YKAFLEILHT YQKEQRNAKE AGGNYTPALT EQEVYAQVAR BACU017889/1-1310 KNRFQGQPDI YKAFLEILHT YQKEQRNAKE AGGNYTPALT EQEVYAQVAR 401 450 ENSTTRP00000010863/1-1211 LFKNQEDLLS EFGQFLPDAN SSVLLSKTTA EKVDSVRNDH GGTVKKPQLN ENSP00000378402/1-1273 LFKNQEDLLS EFGQFLPDAN SSVLLSKTTA EKVDSVRNDH GGTVKKPQLN ENSBTAP00000013167/1-1274 LFKNQEDLLS EFGQFLPDAN SSVLLSKTTA EKVDSVRNDH GGTVKKPQLN bmy_01510T0/1-1252 LFKNQEDLLS EFGQFLPDAN SSVLLSKTTA EKVDSVRNDH GGTVKKPQLN BACU017889/1-1310 LFKNQEDLLS EFGQFLPDAN SSVLLSKTTA EKVDSVRNDH GGTVKKPQLN 451 500 ENSTTRP00000010863/1-1211 NKPQRPSQNG CQIRRHSGTG ATPPVKKKPK LLSLKDSSMA DASKHGVGTE ENSP00000378402/1-1273 NKPQRPSQNG CQIRRHP-TG TTPPVKKKPK LLNLKDSSMA DASKHGGGTE ENSBTAP00000013167/1-1274 NKPQRPSQNG CQIRRHSGTG ATPPVKKKPK LLSLKDSSMA DASKHGVGTE bmy_01510T0/1-1252 NKPQRPSQNG CQIRRHSGTG ATPPVKKKPK LLSLKDSSMA DASKHGVGTE BACU017889/1-1310 NKPQRPSQNG CQIRRHSGTG ATPPVKKKPK LLSLKDSSMA DASKHGVGTE 501 550 ENSTTRP00000010863/1-1211 SLFFDKVRKA LRSAEAYENF LRCLVIFNQE VISRAELVQL VSPFLGKFPE ENSP00000378402/1-1273 SLFFDKVRKA LRSAEAYENF LRCLVIFNQE VISRAELVQL VSPFLGKFPE ENSBTAP00000013167/1-1274 SLFFDKVRKA LRSAEAYENF LRCLVIFNQE VISRAELVQL VSPFLGKFPE bmy_01510T0/1-1252 SLFFDK---- ---------- ---------E VISRAELVQL VSPFLGKFPE BACU017889/1-1310 SLFFDKVRKA LRSAEAYENF LRCLVIFNQE VISRAELVQL VSPFLGKFPE 551 600 ENSTTRP00000010863/1-1211 LFNWFKNFLG YKESVHLETF PKERATEGIA MEIDYASCKR LGSSYRALPK ENSP00000378402/1-1273 LFNWFKNFLG YKESVHLETY PKERATEGIA MEIDYASCKR LGSSYRALPK ENSBTAP00000013167/1-1274 LFNWFKNFLG YKESVHLETF PKERATEGIA MEIDYASCKR LGSSYRALPK bmy_01510T0/1-1252 LFNWFKNFLG YKESVHMETF PKERATEGIA MEIDYASCKR LGSSYRALPK BACU017889/1-1310 LFNWFKNFLG YKESVHLETF PKERATEGIA MEIDYASCKR LGSSYRALPK 601 650 ENSTTRP00000010863/1-1211 SYQQPKCTGR TPLCKEVLND TWVSFPSWSE DSTFVSSKKT QYEEHIYRCE ENSP00000378402/1-1273 SYQQPKCTGR TPLCKEVLND TWVSFPSWSE DSTFVSSKKT QYEEHIYRCE ENSBTAP00000013167/1-1274 SYQQPKCTGR TPLCKEVLND TWVSFPSWSE DSTFVSSKKT QYEEHIYRCE bmy_01510T0/1-1252 SYQQPKCTGR TPLCKEVLND TWVSFPSWSE DSTFVSSKKT QYEEHIYRCE BACU017889/1-1310 SYQQPKCTGR TPLCKEVLND TWVSFPSWSE DSTFVSSKKT QYEEHIYRCE 651 700 ENSTTRP00000010863/1-1211 DERFELDVVL ETNLATIRVL EAIQKKLSRL SAEEQAKFRL DNTLGGTSEV ENSP00000378402/1-1273 DERFELDVVL ETNLATIRVL EAIQKKLSRL SAEEQAKFRL DNTLGGTSEV ENSBTAP00000013167/1-1274 DERFELDVVL ETNLATIRVL EAIQKKLSRL SAEEQAKFRL DNTLGGTSEV bmy_01510T0/1-1252 DERFELDVVL ETNLATIRVL EAIQKKLSRL SAEEQAKFRL DNTLGGTSEV BACU017889/1-1310 DERFELDVVL ETNLATIRVL EAIQKKLSRL SAEEQAKFRL DNTLGGTSEV 701 750 ENSTTRP00000010863/1-1211 IHRKALQRIY ADKAADIIDG LRKNPSIAVP IVLKXXXXXX XXXXXXXXXX ENSP00000378402/1-1273 IHRKALQRIY ADKAADIIDG LRKNPSIAVP IVLKRLKMKE EEWREAQRGF ENSBTAP00000013167/1-1274 IHRKALQRIY ADKAADIIDG LRKNPSIAVP IVLKRLKMKE EEWREAQRGF bmy_01510T0/1-1252 IHRKALQRIY ADKAADIIDG LRKNPSIAVP IVLKRLKMKE EEWREAQRGF BACU017889/1-1310 IHRKALQRIY ADKAADIIDG LRKNPSIAVP IVLKRLKMKE EEWREAQRGF 751 800 ENSTTRP00000010863/1-1211 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXRQEQ ENSP00000378402/1-1273 NKVWREQNEK YYLKSLDHQG INFKQNDTKV LRSKSLLNEI ESIYDERQEQ ENSBTAP00000013167/1-1274 NKVWREQNEK YYLKSLDHQG INFKQNDTKV LRSKSLLNEI ESIYDERQEQ bmy_01510T0/1-1252 NKVWREQNEK YYLKSLDHQG INFKQNDTKV LRSKSLLNEI ESIYDERQEQ BACU017889/1-1310 NKVWREQNEK YYLKSLDHQG INFKQNDTKV LRSKSLLNEI ESIYDERQEQ 801 850 ENSTTRP00000010863/1-1211 ATEENAGVPV GPHLSLAYED KQILEDAAAL IIHHVKRQTG IQKEDKYKIK ENSP00000378402/1-1273 ATEENAGVPV GPHLSLAYED KQILEDAAAL IIHHVKRQTG IQKEDKYKIK ENSBTAP00000013167/1-1274 ATEENAGVPV GPHLSLAYED KQILEDAAAL IIHHVKRQTG IQKEDKYKIK bmy_01510T0/1-1252 ATEENAGVPV GPHLSLAYED KQILEDAAAL IIHHVKRQTG IQKEDKYKIK BACU017889/1-1310 ATEENAGVPV GPHLSLAYED KQILEDAAAL IIHHVKRQTG IQKEDKYKIK 851 900 ENSTTRP00000010863/1-1211 QIMHHFIPDL LFAQRGDLSD VEEEEEEEMD VDEATGAAKK HNGVGGSPPK ENSP00000378402/1-1273 QIMHHFIPDL LFAQRGDLSD VEEEEEEEMD VDEATGAVKK HNGVGGSPPK ENSBTAP00000013167/1-1274 QIMHHFIPDL LFAQRGDLSD VEEEEEEEMD VDEATGAAKK HNGVGGSPPK bmy_01510T0/1-1252 QIMHHFIPDL LFAQRGDLSD VEEEEEEEMD VDEATGAAKK HNGVGGSPPK BACU017889/1-1310 QIMHHFIPDL LFAQRGDLSD VEEEEEEEMD VDEATGAAKK HNGVGGSPPK 901 950 ENSTTRP00000010863/1-1211 SKLLFSNTAA QKLRGMDEVY NLFYVNNNWY IFMRLHQILC LRLLRICSQA ENSP00000378402/1-1273 SKLLFSNTAA QKLRGMDEVY NLFYVNNNWY IFMRLHQILC LRLLRICSQA ENSBTAP00000013167/1-1274 SKLLFSNTAA QKLRGMDEVY NLFYVNNNWY IFMRLHQILC LRLLRICSQA bmy_01510T0/1-1252 SKLLFSNTAA QKLRGMDEVY NLFYVNNNWY IFMRLHQILC LRLLRICSQA BACU017889/1-1310 SKLLFSNTAA QKLRGMDEVY NLFYVNNNWY IFMRLHQILC LRLLRICSQA 951 1000 ENSTTRP00000010863/1-1211 ERQIEEENRE REWEREVLGI KRDKSDSPAI QLRLKEPMDV DVEDYYPAFL ENSP00000378402/1-1273 ERQIEEENRE REWEREVLGI KRDKSDSPAI QLRLKEPMDV DVEDYYPAFL ENSBTAP00000013167/1-1274 ERQIEEENRE REWEREVLGI KRDKSDSPAI QLRLKEPMDV DVEDYYPAFL bmy_01510T0/1-1252 ERQIEEENRE REWEREVLGI KRDKSDSPAI QLRLKEPMDV DVEDYYPAFL BACU017889/1-1310 ERQIEEENRE REWEREVLGI KRDKSDSPAI QLRLKEPMDV DVEDYYPAFL 1001 1050 ENSTTRP00000010863/1-1211 DMVRSLLDGN IDSSQYEDSL REMFTIHAYI AFTMDKLIQS IVRQLQHIVS ENSP00000378402/1-1273 DMVRSLLDGN IDSSQYEDSL REMFTIHAYI AFTMDKLIQS IVRQLQHIVS ENSBTAP00000013167/1-1274 DMVRSLLDGN IDSSQYEDSL REMFTIHAYI AFTMDKLIQS IVRQLQHIVS bmy_01510T0/1-1252 DMVRSLLDGN IDSSQYEDSL REMFTIHAYI AFTMDKLIQS IVRQLQHIVS BACU017889/1-1310 DMVRSLLDGN IDSSQYEDSL REMFTIHAYI AFTMDKLIQS IVRQLQHIVS 1051 1100 ENSTTRP00000010863/1-1211 DEICVQVTDL YLAENNNGAT GGQLNTQTSR SLLESTYQRK AEQLMSDENC ENSP00000378402/1-1273 DEICVQVTDL YLAENNNGAT GGQLNTQNSR SLLESTYQRK AEQLMSDENC ENSBTAP00000013167/1-1274 DEICVQVTDL YLAENNNGAT GGQLNTQTSR SLLESTYQRK AEQLMSDENC bmy_01510T0/1-1252 DEICVQVTDL YLAENNNGAT GGQLNTQTSR SLLESTYQRK AEQLMSDENC BACU017889/1-1310 DEICVQVTDL YLAENNNGAT GGQLNTQTSR SLLESTYQRK AEQLMSDENC 1101 1150 ENSTTRP00000010863/1-1211 FKLMFIQSQG QVQLTIELLD TEEENSDDPV EAERWSDYVE RYMNSDTTSP ENSP00000378402/1-1273 FKLMFIQSQG QVQLTIELLD TEEENSDDPV EAERWSDYVE RYMNSDTTSP ENSBTAP00000013167/1-1274 FKLMFIQSQG QVQLTIELLD TEEENSDDPV EAERWSDYVE RYMNSDTTSP bmy_01510T0/1-1252 FKLMFIQSQG QVQLTIELLD TEEENSDDPV EAERWSDYVE RYMNSDTTSP BACU017889/1-1310 FKLMFIQSQG QVQLTIELLD TEEENSDDPV EAERWSDYVE RYMNSDTTSP 1151 1200 ENSTTRP00000010863/1-1211 ELREHLARKP VFLPRNLRRI RKCQRGREQQ EKEGKEGNSK KTMENADSLD ENSP00000378402/1-1273 ELREHLAQKP VFLPRNLRRI RKCQRGREQQ EKEGKEGNSK KTMENVDSLD ENSBTAP00000013167/1-1274 ELREHLARKP VFLPRNLRRI RKCQRGREQQ EKEGKEGNSK KTMENADSLD bmy_01510T0/1-1252 ELREHLARKP VFLPRNLRRI RKCQRGREQQ EKEGKEGNSK KTMENADSLD BACU017889/1-1310 ELREHLARKP VFLPRNLRRI RKCQRGREQQ EKEGKEGNSK KTMENADSLD 1201 1250 ENSTTRP00000010863/1-1211 KLECRFKLNS YKMVYVIKSE DYMYRRTALL RAHQSHERVS KRLHQRFQAW ENSP00000378402/1-1273 KLECRFKLNS YKMVYVIKSE DYMYRRTALL RAHQSHERVS KRLHQRFQAW ENSBTAP00000013167/1-1274 KLECRFKLNS YKMVYVIKSE DYMYRRTALL RAHQSHERVS KRLHQRFQAW bmy_01510T0/1-1252 KLECRFKLNS YKMVYVIKSE DYMYRRTALL RAHQSHERVS KRLHQRFQAW BACU017889/1-1310 KLECRFKLNS YKMVYVIKSE DYMYRRTALL RAHQSHERVS KRLHQRFQAW 1251 1300 ENSTTRP00000010863/1-1211 VDKWTKEHVP REMAAETSKW LMGEGLEGLV PCTTTCDTET LHFVSINKYR ENSP00000378402/1-1273 VDKWTKEHVP REMAAETSKW LMGEGLEGLV PCTTTCDTET LHFVSINKYR ENSBTAP00000013167/1-1274 VDKWTKEHVP REMAAETSKW LMGEGLEGLV PCTTTCDTET LHFVSINKYR bmy_01510T0/1-1252 VDKWTKEHVP REMAAETSKW LMGEGLEGLV PCTTTCDTET LHFVSINKYR BACU017889/1-1310 VDKWTKEHVP REMAAETSKW LMGEGLEGLV PCTTTCDTET LHFVSINKYR 1301 1350 ENSTTRP00000010863/1-1211 VKYGTVFKAP ENSP00000378402/1-1273 VKYGTVFKAP ENSBTAP00000013167/1-1274 VKYGTVFKTP bmy_01510T0/1-1252 VKYGTVFKAP BACU017889/1-1310 VKYGTVFKAP