KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:16 2014 Check: 00 .. Name: bmy_10829T0/1-400 Len: 562 Check: 3799 Weight: 1.00 Name: ENSP00000240335/1-545 Len: 562 Check: 4641 Weight: 1.00 Name: ENSBTAP00000013147/1-556 Len: 562 Check: 725 Weight: 1.00 Name: BACU013994/1-459 Len: 562 Check: 7583 Weight: 1.00 Name: ENSTTRP00000004285/1-489 Len: 562 Check: 7761 Weight: 1.00 // 1 50 bmy_10829T0/1-400 ---------- ---------- ---------- ---------- ---------- ENSP00000240335/1-545 MLQDKGLSES EEAFRAPGPA LGEAS----- -AANAPEPAL AAPGLSGAAL ENSBTAP00000013147/1-556 MLQDKGLSES EEAFRAPGAA LGEASAASAA NAANAPEPAL AAPGLSGAAL BACU013994/1-459 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004285/1-489 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_10829T0/1-400 ---------- ---------- ---------- ---------- ---------- ENSP00000240335/1-545 GSPPGPGAD- -VVAAAAAEQ TIENIKVGLH EKELWKKFHE AGTEMIITKA ENSBTAP00000013147/1-556 ASPPGPGADV AVATAAAAEQ TIENIKVGLH EKELWKKFHE AGTEMIITKA BACU013994/1-459 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004285/1-489 ---------- ---------- TIENIKVGLH EKELWKKFHE AGTEMIITK- 101 150 bmy_10829T0/1-400 ---------- ---------- ---------- ---------- ------QGKP ENSP00000240335/1-545 GRRMFPSYKV KVTGMNPKTK YILLIDIVPA DDHRYKFCDN KWMVAGKAEP ENSBTAP00000013147/1-556 GRRMFPSYKV KVTGMNPKTK YILLIDIVPA DDHRYKFCDN KWMVAGKAEP BACU013994/1-459 ---MFPSYKV KVTGMNPKTK YILLIDIVPA DDHRYKFCDN KWMVAGKAEP ENSTTRP00000004285/1-489 GRRMFPSYKV KVTGMNPKTK YILLIDIVPA DDHRYKFCDN KWMVAGKAEP 151 200 bmy_10829T0/1-400 A-PGQLN-EA EDKRVGTQSS EETLLFQ--- ---------- -IILNSMHKY ENSP00000240335/1-545 AMPGRLYVHP DSPATGAHWM RQLVSFQKLK LTNNHLDPFG HIILNSMHKY ENSBTAP00000013147/1-556 AMPGRLYVHP DSPATGAHWM RQLVSFQKLK LTNNHLDPFG HIILNSMHKY BACU013994/1-459 AMPGRLYVHP DSPATGAHWM RQLVSFQKLK LTNNHLDPFG HIILNSMHKY ENSTTRP00000004285/1-489 AMPGRLYVHP DSPATGAHWM RQLVSFQKLK LTNNHLDPFG HIILNSMHKY 201 250 bmy_10829T0/1-400 QPRLHIVKAD ENNAFGSKNT AFCTHVFPET SFISVTSYQN HKITQLKIEN ENSP00000240335/1-545 QPRLHIVKAD ENNAFGSKNT AFCTHVFPET SFISVTSYQN HKITQLKIEN ENSBTAP00000013147/1-556 QPRLHIVKAD ENNAFGSKNT AFCTHVFPET SFISVTSYQN HKITQLKIEN BACU013994/1-459 QPRLHIVKAD ENNAFGSKNT AFCTHVFPET SFISVTSYQN HKITQLKIEN ENSTTRP00000004285/1-489 QPRLHIVKAD ENNAFGSKNT AFCTHVFPET SFISVTSYQN HKITQLKIEN 251 300 bmy_10829T0/1-400 NPFAKGFRGS DDSDLRVARL QSKEYPVISK SIMRQRLVST QLSSKPDVSP ENSP00000240335/1-545 NPFAKGFRGS DDSDLRVARL QSKEYPVISK SIMRQRLISP QLSATPDVGP ENSBTAP00000013147/1-556 NPFAKGFRGS DDSDLRVARL QSKEYPVISK SIVRQRLVST QLSSKPDVSP BACU013994/1-459 NPFAKGFRGS DDSDLRVARL QGKEYPVISK SIMRQRLVST QLSSKPDVSP ENSTTRP00000004285/1-489 NPFAKGFRGS DDSDLRVARL QSKEYPVISK SIMRQRLVST QLASKPDVSP 301 350 bmy_10829T0/1-400 LHGAHQALQH YQYENGAHMQ FAAAEPQDLP LNTFPAQRDS SLFYHCLKRR ENSP00000240335/1-545 LLGTHQALQH YQHENGAHSQ L--AEPQDLP LSTFPTQRDS SLFYHCLKRR ENSBTAP00000013147/1-556 LHGAHQALQH YQYENGAHMQ FAAAEPQDLP LNTFPAQRDS SLFYHCLKRR BACU013994/1-459 LHGAHQALQH YQYENGAHMQ FAAAEPQDLP LNTFPAQRDS SLFYHCLKRR ENSTTRP00000004285/1-489 LHGAHQALQH YQYENGAHMQ FAAAEPQDLP LNTFPAQRDS SLFYHCLKRR 351 400 bmy_10829T0/1-400 DSARHLDLPC KRSYLEAPTA VGEDHYFRSP PPYDQQMLSP SYCSEVTPRE ENSP00000240335/1-545 DGTRHLDLPC KRSYLEAPSS VGEDHYFRSP PPYDQQMLSP SYCSEVTPRE ENSBTAP00000013147/1-556 DSARHLDLPC KRSYLEAPSA VGEDHYFRSP PPYDQQMLSP SYCSEVTPRE BACU013994/1-459 DSARHLDLPC KRSYLEAPTA VGEDHYFRSP PPYDQQMLSP SYCSEVTPRE ENSTTRP00000004285/1-489 DSARHLDLPC KRSYLEAPTA VGEDHYFRSP PPYDQQMLSP SYCSEVTPRE 401 450 bmy_10829T0/1-400 ACMYSGSGTE IAGVSGVDDL PPPPLSCNMW TSVSPYTSYS VQTVETVPYQ ENSP00000240335/1-545 ACMYSGSGPE IAGVSGVDDL PPPPLSCNMW TSVSPYTSYS VQTMETVPYQ ENSBTAP00000013147/1-556 ACMYSGSGPE IAGVSGVDDL PPPPLSCNMW TSVSPYTSYS VQTMETVPYQ BACU013994/1-459 ACMYSGSGTE IAGVSGVDDL PPPPLSCNMW TSVSPYTSYS VQTVETVPYQ ENSTTRP00000004285/1-489 ACMYSGSGTE IAGVSGVDDL PPPPLSCNMW TSVSPYTSYS VQTVETVPYQ 451 500 bmy_10829T0/1-400 SFPTHFTATT MMPRLPPISA PSSQPPGSAH FSVYNQLSQS QVRERERGPS ENSP00000240335/1-545 PFPTHFTATT MMPRLPTLSA QSSQPPGNAH FSVYNQLSQS QV--RERGPS ENSBTAP00000013147/1-556 SFPTHFTATT MMPRLPTISA QGSQPPGNAH FSVYNQLSQS QV--RERGPS BACU013994/1-459 SFPTHFTATT MMPRLPPISA PSSQPPGSAH FSVYNQLSQS QVRERERGPS ENSTTRP00000004285/1-489 SFPTHFTATT MMPRLPPISA PSSQPPGSAH FSVYNQLSQS QVRERERGPG 501 550 bmy_10829T0/1-400 ASFPRERGLP GTGTGTACER KPPSPHLNAA NEFLYSQSFS LSREASLQYH ENSP00000240335/1-545 ASFPRERGLP -----QGCER KPPSPHLNAA NEFLYSQTFS LSRESSLQYH ENSBTAP00000013147/1-556 ASFPRDRALP ----GAVCER KPPSPHLNAA NEFLYSQSFS LSREASLQYH BACU013994/1-459 ASFPRERGLP GTGTGTACER KPPSPHLNAA NEFLYSQSFS LSREASLQYH ENSTTRP00000004285/1-489 ASFPRERGFP --GTGTACER KPPSPHLNAA NEFLYSQSFS LSREASLQYH 551 600 bmy_10829T0/1-400 SGMGTVENWT DG ENSP00000240335/1-545 SGMGTVENWT DG ENSBTAP00000013147/1-556 SGMGTVENWT DG BACU013994/1-459 SGMGTVENWT DG ENSTTRP00000004285/1-489 SGMGTVENWT DG