KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:48:04 2014 Check: 00 .. Name: ENSP00000263100/1-495 Len: 586 Check: 8568 Weight: 1.00 Name: ENSBTAP00000012837/1-503 Len: 586 Check: 3668 Weight: 1.00 Name: bmy_13349T0/1-513 Len: 586 Check: 3682 Weight: 1.00 Name: BACU005944/1-420 Len: 586 Check: 7963 Weight: 1.00 Name: ENSTTRP00000001864/1-498 Len: 586 Check: 7768 Weight: 1.00 // 1 50 ENSP00000263100/1-495 ---------- ---------- ---------- ---------- --MSMLVVFL ENSBTAP00000012837/1-503 ---------- ---------- ---------- ---------- --MSAWAALL bmy_13349T0/1-513 ---------- ---------- ---------- ---------- ---LLIVAIA BACU005944/1-420 MSSGWDEGPP MCPRCDQASG PFPHEPGRPV QQLYACVECG KAFTCTSRLL ENSTTRP00000001864/1-498 ---------- ---------- ---------- ---------- ---SARVALL 51 100 ENSP00000263100/1-495 ----LLWGVT WGPV------ -TEAAIFYET QPSLWAESES LLKPLANVTL ENSBTAP00000012837/1-503 ----LLWGLS LSPV------ -TEQATFFDP RPSLWAEAGS PLAPWADVTL bmy_13349T0/1-513 ETPEATSALC PDPLEPCFPG NTNELRVFDT RPTLWAEAES LLEPWANVTL BACU005944/1-420 QPEGIHTGLA LNPV------ -TEEAVFFNT RPTLWAEVES LLEPWANVTL ENSTTRP00000001864/1-498 ----LLWGLA LNPV------ -TEEAKYFDT RPTLWAEAES LLEPWANVTL 101 150 ENSP00000263100/1-495 TCQAHLETPD FQLFKNGVAQ EPVHLDSPAI KHQFLL---T GDTQGRYRCR ENSBTAP00000012837/1-503 TCQSPLPTQE FQLLKDGVGQ EPVHLESPAH EHRFPLGPVT STTRGLYRCS bmy_13349T0/1-513 TCQSPLWTLE FQLLKDGEAQ ELVHLGSPAT EYRFPLGAVT GDTRGLYRCR BACU005944/1-420 TCQSPLWTLE FQLLKDGVAQ ELVHLGSPAT EYRFPLGAVT GDTRGLYRCH ENSTTRP00000001864/1-498 TCQSPLWTLE FQLFRDGVAQ GLVHLDSPAT EYRFPLGAVT GDTRGLYRCH 151 200 ENSP00000263100/1-495 SGLSTGWTQL SKLLELTGPK SLPAPWLSMA PVSWITPGLK TTAVCRGVLR ENSBTAP00000012837/1-503 YKGNNDWISP SNLVEVTGAE PLPAPSISTS PVSWITPGLN TTLLCLSGLR bmy_13349T0/1-513 YSMDSGRTSL SNLVEVTGAE PLPPPLLSTK PVPWITPGLN TTLLCLGGLR BACU005944/1-420 YSMDSGRTSL SNLVEVTGA- ---------- ---------- ---------- ENSTTRP00000001864/1-498 YSMDSGRSSL SNLVEVTGAE PLPPPLLSTK PVPWITPGLN TRLLCLGGLR 201 250 ENSP00000263100/1-495 GVTFLLRREG DHEFLEVPEA QEDVEATFPV HQPGNYSCSY RTDGEGALSE ENSBTAP00000012837/1-503 GVTFLLRLEG EDQFLEVAEA PEATQATFPV HRAGNYSCSY RTHAAGTPSE bmy_13349T0/1-513 GVTFLLRREG DDQFLEVAEA PKDTQATFPV HRAGNYSCSY RTHASGAPSE BACU005944/1-420 ---------- ---------- ---------V HRAGNYSCSY RTHASGAPSE ENSTTRP00000001864/1-498 GVTFLLRREG DDKFLEVAEA PKDRQATFPV HRAGIYSCSY RTHASGAPSE 251 300 ENSP00000263100/1-495 PSATVTIEEL AAPPPPVLMH HGESSQVLHP GNKVTLTCVA PLSGVDFQLR ENSBTAP00000012837/1-503 PSATVTIEEL DPPPAPTLTV DRESAKVLRP GSSASLTCVA PLSGVDFQLR bmy_13349T0/1-513 PSATVTIEEL ATPPPPTLTL NSGFAGLLRP GSRATLACVA PLSGVNFQLR BACU005944/1-420 PSATVTIEEL ATPPPPTLTL NSGFAGLLRP GSRTTLTCVA PLSGVDFQLR ENSTTRP00000001864/1-498 PSATVTIEEL ATPPPPTLTL NGGFAGLLRP GSSATLTCVA PLSGVQFQLR 301 350 ENSP00000263100/1-495 RGEKELLVPR SSTSPDRIFF HLNAVALGDG GHYTCRYRLH DNQNGWSGDS ENSBTAP00000012837/1-503 RGAEEQLVPR ASTSPDRVFF RLSALAAGDG SGYTCRYRLR SELAAWSRDS bmy_13349T0/1-513 RGEEVLQVPM GSTSPDRIFF QLNTLAPGDG GVYTCRYRLR DELAPWSLDS BACU005944/1-420 RGEEVLQVPM ASTSPDRVFF QLNTLAPGDG GVYTCRYRLR DELAPWSLDS ENSTTRP00000001864/1-498 RGEDVLQVPM ASTSPDRLFF QLNTLAPGDG GVYTCRYRLP EELALWSLDS 351 400 ENSP00000263100/1-495 APVELILSDE TLPAPEFSPE PES-----GR ALRLRCLAPL EGARFALVRE ENSBTAP00000012837/1-503 APAELVLSDG TLPAPELSAE PAILSPTPGA LVQLRCRAPR AGVRFALVRK bmy_13349T0/1-513 APAELVLSDG TLPAPELSAE PATLSPEPGT LVQLRCRAPR AGVRFALVRE BACU005944/1-420 APAELVLSDG ---------- ---------- ---------- ---------- ENSTTRP00000001864/1-498 APAELVLSDG TLPAPELSAE PES----RAG DVQLRCRAPR AGVRFSLVRE 401 450 ENSP00000263100/1-495 DRGGRRVHRF QSPAGTEALF ELHNISVADS ANYSCVYVDL KPPFGGSAPS ENSBTAP00000012837/1-503 DAGGRQVQRV LSPAGPEAQF ELRGVSAVDS GNYSCVYVDT SPPFAGSKPS bmy_13349T0/1-513 GAGQRRVHGL LSPAGTEAHF ELRDVSAVDS ANYSCVYTDT ASPLAGSAPS BACU005944/1-420 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001864/1-498 GAGQRRVHGL LSPAGTEAHF ELRDVSAVDS ANYSCVYTDT APPFAGSAPS 451 500 ENSP00000263100/1-495 ERLELHVDGP PPRPQLRATW SGAVLAGRDA VLRCEGPIPD VTFELLREGE ENSBTAP00000012837/1-503 ATLELRVDGP LPRPQLRALW TGALTPGRDA VLRCEAEVPD VSFLLLRAGE bmy_13349T0/1-513 APVELRVDGP LPRPRLRPLW TGAVTPGRDA VLRCEGHVPD VSFLLLRSGE BACU005944/1-420 ---------P LPRPRLRPLW TGAVTPGRDA VLRCEGHVPD VSFLLLRSGE ENSTTRP00000001864/1-498 APVELRVDGP LPKPRLRALW TGAVTPGRDA VLRCEGHVPD VSFLLLRSGE 501 550 ENSP00000263100/1-495 TKAVKTVRTP GAAANLELIF VGPQHAGNYR CRYRSWVPHT FESELSDPVE ENSBTAP00000012837/1-503 EEPLAVAWST HGPADLVLTS VGPQHAGTYS CRYRTGGPRS LLSELSDPVE bmy_13349T0/1-513 EEPSAVVWAT HPSADLVLTY VGPQHAGNYS CSYRSNWAHS LLSQLSDPVE BACU005944/1-420 EEPSAVVWTT HPSADLVLTY VGPQHAGNYS CGYRSNWPHS LLSQLSDPVE ENSTTRP00000001864/1-498 EEPSAVAWTT HPSADLVLTY VGPQHAGNYS CGYRSNWAHS LLSQLSDPVE 551 600 ENSP00000263100/1-495 LLVAES---- ---------- ---------- ------ ENSBTAP00000012837/1-503 LRVAGS---- ---------- ---------- ------ bmy_13349T0/1-513 LQVAGS---- ---------- ---------- ------ BACU005944/1-420 LQVAGGARFR GRVEAPGLCP IVPSSRSALP RTSSQH ENSTTRP00000001864/1-498 LQVAGS---- ---------- ---------- ------