KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:47:49 2014 Check: 00 .. Name: ENSP00000352270/1-156 Len: 199 Check: 6790 Weight: 1.00 Name: ENSBTAP00000012794/1-156 Len: 199 Check: 6785 Weight: 1.00 Name: ENSTTRP00000010061/1-189 Len: 199 Check: 468 Weight: 1.00 Name: bmy_13913T0/1-92 Len: 199 Check: 7126 Weight: 1.00 Name: BACU008654/1-165 Len: 199 Check: 2748 Weight: 1.00 // 1 50 ENSP00000352270/1-156 MLSARDRRDR HPEEGVVAEL QGFAVDKAFL TSHKGILLET ELALTLIIFI ENSBTAP00000012794/1-156 MFNAWSRRDR PPEDGTAAGL DGFAVDKTFL SSLKGILLET ELALTFIIFI ENSTTRP00000010061/1-189 MLSAWNRRDR PPEEGAAAGL QGFTVDKAFL SSLKGILLET ELALTFIIFV bmy_13913T0/1-92 ---------- ---------- ---------- ---------- ---------- BACU008654/1-165 MLSAWNRRDR PPEEGAAAGL QGFTVDKTFL SSLKGILLET ELALTFIIFV 51 100 ENSP00000352270/1-156 CFTASISAYM AAALLEFFIT LAFLFLYATQ YYQRFDRINW PCL------- ENSBTAP00000012794/1-156 CFMASISAYM AAALLEFFIT LAFLFLYATQ YYERFDRMNW PCL------- ENSTTRP00000010061/1-189 CFTASISAYM AAALLEFFIT LAFLFLYATQ YYQRFDRLNW PCLPHPSDLL bmy_13913T0/1-92 ---------M AAALLEFFIT LAFLFLYATQ YYQRFDRLNW PCL------- BACU008654/1-165 CFTASISAYM AAALLEFFIT LAFLFLYATQ YYQRFDRLNW PCL------- 101 150 ENSP00000352270/1-156 ---------- ---------- -------DFL RCVSAIIIFL VVSFAAVTSR ENSBTAP00000012794/1-156 ---------- ---------- -------DFL RCVSAIIIFL VVSFAAVTSR ENSTTRP00000010061/1-189 PCVQPQPRPW LSWSWLLFIF IPPLGSCDFL RCVSASIIFL VVSFAAVTSR bmy_13913T0/1-92 ---------- ---------- -------DFL RCVSASIIFL VVSFAAVTSR BACU008654/1-165 ---------- ---------- -------DFL RCVSASIIFL VVSFAAVTSR 151 200 ENSP00000352270/1-156 DGAAIAAFVF GIILVSIFAY DAFKIYRTEM APGASQGDQQ --------- ENSBTAP00000012794/1-156 DGAAIAAFVF GIILVSVFAY DAFKIYRTEM VPRAAQGDQQ --------- ENSTTRP00000010061/1-189 DGAAIAAFVF GIILVSVFAY DAFKIYRTEL ASRATQGDQ- --------- bmy_13913T0/1-92 DGAAIAAFVF GIILVSVFAY DAFKIYRTEM APRAT----- --------- BACU008654/1-165 DGAAIAAFVF GIILVSVFAY DAFKIYRTEM APRATQVLRT LPMGHSQDW