KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:46:14 2014 Check: 00 .. Name: ENSP00000352976/1-360 Len: 409 Check: 695 Weight: 1.00 Name: ENSBTAP00000012301/1-332 Len: 409 Check: 488 Weight: 1.00 Name: bmy_13530T0/1-248 Len: 409 Check: 7552 Weight: 1.00 Name: BACU011454/1-360 Len: 409 Check: 1501 Weight: 1.00 // 1 50 ENSP00000352976/1-360 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000012301/1-332 ---------- ---------- ---------- ---------- ---------M bmy_13530T0/1-248 MTGRQGAGHN GACVXRWGVA XREGEGHDVG RRARRRAGGV DARRDDDDEM BACU011454/1-360 ---------- ---------- ---------- ---------- ---------M 51 100 ENSP00000352976/1-360 QIIRHSEQTL KTALISKNPV LVSQYEKLNA GEQRLMNEAF QPASDLFGPI ENSBTAP00000012301/1-332 QTVGHSEHTL KTALISKNPE LVKQYEQLDP GEQRLLNEAF RPRSDLFGPI bmy_13530T0/1-248 KTVRHSEHTL KTALISKNPA LVSQYEKLDX GEKRLMDEAF RPDSDLFGPI BACU011454/1-360 QTVRHSEHTL KTALISKNPA LVSQYEKLDA GEKRLMEEAF RPDSDLFGPI 101 150 ENSP00000352976/1-360 TLHSPSDWIT SHPEAPQDFE QFFSDPYRKT PSPNKRSIYI QSIGSLGNTR ENSBTAP00000012301/1-332 TLHSPSDWII SHPEAPQDFE QFFSNLHRKS PSPGKQTIYI QCIGLLGNTR bmy_13530T0/1-248 TLHSQSDWIT SHPEAPQDFE EFFNDPYRKT PSPQKHSIYI QCIGLLGNTR BACU011454/1-360 TLHSQSDWIT SHPEAPQDFE EFFNDPYRKT PSPQKHSIYI QCIGLLGNTR 151 200 ENSP00000352976/1-360 IISEEYIKWL TGYCKAYFYG LRVKLLEPVP VSVTRCSFRV NENTHNLQIH ENSBTAP00000012301/1-332 SISEEYLKWL KGYCEAFFYG LTVKLLEPIP VSATRCSFRI NDSTLNLQIH bmy_13530T0/1-248 SISEEYVKWL KGYCEAFFYG LTVKLLEPVP VSATRCSFRI NDNTQNLQIH BACU011454/1-360 SISEEYVKWL KGYCEAFFYG LTVKLLEPVP VSATRCSFRI NDNTQNLQIH 201 250 ENSP00000352976/1-360 AGDILKFLKK KKPEDAFCVV GITMIDLYPR DSWNFVFGQA SLTDGVGIFS ENSBTAP00000012301/1-332 AGQILTFLKK KKPEDAFCVV GVTMIDLYPR ESWNFVFGQA SLTEGVGIFS bmy_13530T0/1-248 AGQILKFLKK KKPEDAFCVV GITMIDLYPR DSWNFVFGQA SLTDGIPF-- BACU011454/1-360 AGQILKFLKK KKPEDAFCVV GITMIDLYPR DSWNFVFGQA SLTDGVGIFS 251 300 ENSP00000352976/1-360 FARYGSDFYS MHYKGKVKKL KKTSSSDYSI FDNYYIPEIT SVLLLRSCKT ENSBTAP00000012301/1-332 FARYGTDFYS SHYKGKLKKL ERKSSSDYSV FNDYYLPEAT SVLLLRSCKT bmy_13530T0/1-248 ---------- ---------- ---------- ---------- ---------- BACU011454/1-360 FARYGSDFYS SHYEGKLKKL QKKSSSDYSV FDNYYVPEVT SVLLLRSCKT 301 350 ENSP00000352976/1-360 LTHEIGHIFG LRHCQWLACL MQGSNHLEEA DRRPLNLCPI CLHKLQCAVG ENSBTAP00000012301/1-332 LTHEIGHIFG LRHCQWLACL MQGSNHLEEA DRRPLDLCPI CLRKLQSAVG bmy_13530T0/1-248 ---------- ---------- ---------- ---------- ---------- BACU011454/1-360 LTHEIGHIFG LRHCQWLACL MQGSNHLEEA DQRPLDLCPI CLRKLQSAIG 351 400 ENSP00000352976/1-360 FSIVERYKAL VRWIDDESSD TPGATPEHSH EDNGNLPKPV EAFKEWKEWI ENSBTAP00000012301/1-332 FRLRDRYKAL VRWIDAESTD TPRVTPKHSR E--------- ---------- bmy_13530T0/1-248 ---------- ---------- ---------- ---------- ---------- BACU011454/1-360 FHLKDRYKAL VRWVDAESTD TPTVTPERSR EDPLSLPKPV EAFKEWREWI 401 450 ENSP00000352976/1-360 IKCLAVLQK ENSBTAP00000012301/1-332 --------- bmy_13530T0/1-248 --------- BACU011454/1-360 TKCLAVLQK