KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:45:33 2014 Check: 00 .. Name: ENSP00000356842/1-319 Len: 326 Check: 649 Weight: 1.00 Name: ENSBTAP00000012054/1-319 Len: 326 Check: 8790 Weight: 1.00 Name: bmy_14256T0/1-191 Len: 326 Check: 557 Weight: 1.00 Name: ENSTTRP00000008054/1-319 Len: 326 Check: 4212 Weight: 1.00 // 1 50 ENSP00000356842/1-319 -----MVGKM WPVLWTLCAV RVTVDAISVE TPQDVLRASQ GKSVTLPCTY ENSBTAP00000012054/1-319 -----MEGKI QPVLWVLCAV WVTVHGIFVE TPKDVLRAAR GKNVTLPCSY bmy_14256T0/1-191 GNEYECPCQL LPTFF---PV WVTVHAISVE TPKDVLRAAR GKSVTLPCTY ENSTTRP00000008054/1-319 -----MEGKM QPVMWVLCAV WVTVHAISVE TPKDVLRAAR GKSVTLPCTY 51 100 ENSP00000356842/1-319 HTSTSSREGL IQWDKLLLTH TERVVIWPFS NKNYIHGELY KNRVSISNNA ENSBTAP00000012054/1-319 QTSSPNREGF IQWDKLLRSH TERVLIWAFL TKEYVYGELY QNRARISNNA bmy_14256T0/1-191 QTSSLNREGF IQWDKLLRSH TERVLIWTFS TKTYIYGDLY QNRANVSSNV ENSTTRP00000008054/1-319 QTSSLNRDGF IQWDKLLRTH TETVLIWTFS TQNYIYGELY QNRVNVSGNV 101 150 ENSP00000356842/1-319 EQSDASITID QLTMADNGTY ECSVSLMSDL EGNTKSRVRL LVLVPPSKPE ENSBTAP00000012054/1-319 EQSDASITID QLTMDDNGTY ECSVLLTSDL GGVSKSRAYL LVLVPPSKPD bmy_14256T0/1-191 EQSDASITID RLTMDDNGTY ECSVSLLLDL DGVSKSRVRL LVLVPPSKPD ENSTTRP00000008054/1-319 QQSDASITID RLTMDDNGTY ECSVSLLRDL GGISKSRVRL LVLVPPSKPD 151 200 ENSP00000356842/1-319 CGIEGETIIG NNIQLTCQSK EGSPTPQYSW KRYNILNQEQ PLAQPASGQP ENSBTAP00000012054/1-319 CGIQGETVIG NDIQLTCQSK EGSPAPQYSW KSYDVLHQER QV-TPVTGQT bmy_14256T0/1-191 CSIEGETVIG NNIQLTCQSK EGSPAPQYSW RSYDVLHQER KVAP------ ENSTTRP00000008054/1-319 CSIEGETVIG SNIQLTCQSK EGSPAPQYSW KSYDILHQER PVVTPVTGQI 201 250 ENSP00000356842/1-319 VSLKNISTDT SGYYICTSSN EEGTQFCNIT VAVRSPSMNV ALYVGIAVGV ENSBTAP00000012054/1-319 FSLKNISTEM SGYYICISRN EVGTESCNIT VAVRSPSMNV ALYAGVAGGV bmy_14256T0/1-191 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008054/1-319 FSLKNISTEM SGYYICTSSN DVGMESCNIT VAVRPPSMNV ALYAGIAGGV 251 300 ENSP00000356842/1-319 VAALIIIGII IYCCCCRGKD DNTEDKEDAR PNREAYEEPP EQLRELSRER ENSBTAP00000012054/1-319 AAALVIIGII LYCCCCR-DT GKAEDAEVAR PNRAAYREPP EQLTELSRRQ bmy_14256T0/1-191 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008054/1-319 AAALIVIGVI VYCCCCR-ET GKAEDADVTR PNRAGY-QPP EQLTELSRRQ 301 350 ENSP00000356842/1-319 EE--EDDYRQ EEQRSTGRES PDHLDQ ENSBTAP00000012054/1-319 EEEGEDDYRH EDQRHAGRET PDQAGR bmy_14256T0/1-191 ---------- ---------- ------ ENSTTRP00000008054/1-319 EEEGEADYRN EDRRGPSRGS LDQAGR