KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:45:19 2014 Check: 00 .. Name: bmy_14219T0/1-270 Len: 417 Check: 5586 Weight: 1.00 Name: BACU011053/1-298 Len: 417 Check: 3241 Weight: 1.00 Name: ENSP00000192314/1-398 Len: 417 Check: 3370 Weight: 1.00 Name: ENSBTAP00000011986/1-399 Len: 417 Check: 5601 Weight: 1.00 // 1 50 bmy_14219T0/1-270 -------LP- ---------- --PAHRCFWA I--LLLALTV FLLAGFLHVD BACU011053/1-298 MKGKAVKLGT DLRKAVVKSS QVSGNRCFWA I--LLLALTV FLLAGFFHVD ENSP00000192314/1-398 ---MMSMLG- ---------- --GLQRYFRV ILLLLLALTL LLLAGFLHSD ENSBTAP00000011986/1-399 ---SVLKRS- ---------- --SAHRCFWA V-LLLLALAV LLLGCIMHVD 51 100 bmy_14219T0/1-270 VGLLVLPLGG QDEGPPVTNV MFLKTHKTAS STVLNTLFRF DETHNLAAAL BACU011053/1-298 VGLLVPPLGG QDEGTPVTNV MFLKTHKAAS STVLNTLFRF AETHNLAVAL ENSP00000192314/1-398 LELDTPLFGG QAEGPPVTNI MFLKTHKTAS STVLNILYRF AETHNLSVAL ENSBTAP00000011986/1-399 IGLLMPQLGD QADGPPVTNV MFLKTHKTAS STVLNILYHF AETHNLSAAL 101 150 bmy_14219T0/1-270 PAGGRFYLGY PWLFLARYVE GVEQGSPERR FNIMCDHLRF NRREVQKVMP BACU011053/1-298 PAGGRFYLGY PWLFLARYVE GVEQDSPERR FNIMCDHLRL NQREVQKVMP ENSP00000192314/1-398 PAGSRVHLGY PWLFLARYVE GV---GSQQR FNIMCNHLRF NLPQVQKVMP ENSBTAP00000011986/1-399 PAGGRFHLGY PWLFLARYVE GAEQGGPRQR FNIMCNHLRF NPPEVQKVMH 151 200 bmy_14219T0/1-270 SDT-YFSILR NPVFQLESSF IYYKGYVPAF RGVASPEDFL ASSRTYYNPS BACU011053/1-298 SDT-YFPILR NPVFQLESSF IYYKGYVPAF RGVASLEDFL ASSRTYYNPS ENSP00000192314/1-398 NDTFYFSILR NPVFQLESSF IYYKTYAPAF RGAPSLDAFL ASPRTFYNDS ENSBTAP00000011986/1-399 NDTFYFSILR NPVFQLESSF VYYKSHVPAF RNVSSLDAFL ASPWTYYNQS 201 250 bmy_14219T0/1-270 LGLRHTYARN SMWFDVGFDH DVPPEEGYVR ARLAGVEPRF PPVLIAEHFG BACU011053/1-298 LGLRRAYARN SMWFDVGSDH DVPPEEGYVR ARLADVEPRF RLVLIAEHLD ENSP00000192314/1-398 RHLRNVYAKN NMWFDFGFDP NAQCEEGYVR ARIAEVERRF RLVLIAEHLD ENSBTAP00000011986/1-399 LGLSNAHARN SMWFDLGFDN DAPPEEGYVR ARLLDVEQRF QLLLIAEHFD 251 300 bmy_14219T0/1-270 ESTVLPRRLD DAALAAGRRG RLQAQFAQPA QRRPPDDRGP G-------AR BACU011053/1-298 ESTVLPRRLL RWRLDDVVAC RLSLRSPHSV ASLTTAGQER AKRWRALDWR ENSP00000192314/1-398 ESLVLLRRRL RWALDDVVAF RLNSRSARSV ARLSPETRER ARSWCALDWR ENSBTAP00000011986/1-399 ESMVLLRRLL RWRLDDVVAF RLNSRSQHSV TPLSPAGQER AKHWCALDWR 301 350 bmy_14219T0/1-270 ---------- ---------- ---------- ---------- ---------- BACU011053/1-298 L--------- ---------- ---------- ---------- ---------- ENSP00000192314/1-398 LYEHFNRTLW AQLRAELGPR RLRGEVERLR ARRRELASLC LQDGGALKNH ENSBTAP00000011986/1-399 LYQHFNRTFW ARLRAELSPR RLRSEVARLR ERRRELAAMC LQDSEP-KNQ 351 400 bmy_14219T0/1-270 ---------- ---------- ---------- ---------- ---------- BACU011053/1-298 ---------- ---------- ---------- ---------- ---------- ENSP00000192314/1-398 TQIRDPRLRP YQSGKADILG YNLRPGLDNQ TLGVCQRLVM PELQYMARLY ENSBTAP00000011986/1-399 SQITDFRLRP YQSGRADILG YNLRPGLDNQ TLQMCQRMVM PELQYMAHLY 401 450 bmy_14219T0/1-270 ---------- ------- BACU011053/1-298 ---------- ------- ENSP00000192314/1-398 ALQFPEKPLK NIPFLGA ENSBTAP00000011986/1-399 TLQFPDKPPK NIAFLGA