KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:45:02 2014 Check: 00 .. Name: BACU014602/1-402 Len: 444 Check: 6741 Weight: 1.00 Name: bmy_17000T0/1-233 Len: 444 Check: 9967 Weight: 1.00 Name: ENSP00000368547/1-380 Len: 444 Check: 2062 Weight: 1.00 Name: ENSTTRP00000004906/1-376 Len: 444 Check: 2541 Weight: 1.00 Name: ENSBTAP00000011880/1-376 Len: 444 Check: 2474 Weight: 1.00 // 1 50 BACU014602/1-402 MAVCCYQVDG DRIVESSSLS FRSVDGFCGC LTVVPFCLGG EVESSYKGVG bmy_17000T0/1-233 ---------- ---------- ---------- ---------- ---------- ENSP00000368547/1-380 ---------- -MAADGDWQD FYEFQEPARS LLDQENCNAS PEPGAEAGAE ENSTTRP00000004906/1-376 ---------- -MAADGDWQD FYEFQEPALS LQDQENCNAS PE----AEAG ENSBTAP00000011880/1-376 ---------- -MAADGDWQD FYEFQEPARS LQDQENCNAS PE----AGAG 51 100 BACU014602/1-402 SGSNRKIKDQ EDQSPLKKIL ISDLHNAFKD LPP------- --------PR bmy_17000T0/1-233 ---------- ---------- ---------- ---------- ---------- ENSP00000368547/1-380 AGGGADGFPA PACSLEEKLS LCFRPSDPGA EPPRTAVRPI TERSLLQGDE ENSTTRP00000004906/1-376 PGGGGDGFPA LACSLEEKLS LCFRPSGPGA EPPRAAVRPI TECSLLQGDE ENSBTAP00000011880/1-376 PGGGGDGFPA LACHLEEKLS LCFRPSGPAA EPPRAAVRPI TECSLLQGDE 101 150 BACU014602/1-402 IWNALTDNYG NVMPVDWKSS HTRTLHLLTL NLSEKRTSDS LLFDTSDDEE bmy_17000T0/1-233 ---------- --MPVDWKSS HTRTLHLLTL NLSEKRTSDS LLFDTSDDEE ENSP00000368547/1-380 IWNALTDNYG NVMPVDWKSS HTRTLHLLTL NLSEKGVSDS LLFDTSDDEE ENSTTRP00000004906/1-376 IWNALTDNYG NVMPVDWKSS HTRTLHLLTL NLSEKRTSDS LLFDTSDDEE ENSBTAP00000011880/1-376 IWNALTDNYG NVMPVDWKSS HTRTLHLLTL NLSEKGMSDG LLFDTSDDEE 151 200 BACU014602/1-402 LREQLDMHSI IVSCVNDEPL FTADQVIEEI EEMMQESPDP EDDETPTQSD bmy_17000T0/1-233 LREQLDMHSI IVSCVNDEPL FTADQVIEEI EEMMQESPDP EDDETPTQSD ENSP00000368547/1-380 LREQLDMHSI IVSCVNDEPL FTADQVIEEI EEMMQESPDP EDDETPTQSD ENSTTRP00000004906/1-376 LREQLDMHSI IVSCVNDEPL FTADQVIEEI EEMMQESPDP EDDETPTQSD ENSBTAP00000011880/1-376 LREQLDMHSI IVSCVNDEPL FTADQVIEEI EEMMQESPDP EDDETPTQSD 201 250 BACU014602/1-402 RLSMLSQEIQ TLKRSSTSSY EERVKRLSVS ELNELLEEIE TAIKEYSEEL bmy_17000T0/1-233 RLSMLSQEIQ TLKRSSTSSY EERVKRLSVS ELNELLEEIE TAIKEYSEEL ENSP00000368547/1-380 RLSMLSQEIQ TLKRSSTGSY EERVKRLSVS ELNEILEEIE TAIKEYSEEL ENSTTRP00000004906/1-376 RLSMLSQEIQ TLKRSSTSSY EERVKRLSVS ELNELLEEIE TAIKEYSEEL ENSBTAP00000011880/1-376 RLSMLSQEIQ TLKRSSTSSY EERVKRLSVS ELNELLEEIE TAIKEYSEEL 251 300 BACU014602/1-402 VQQLALRDEL EFEKEVKNSF ISVLIEVQNK QKEHKETAKK KKKLKNSSSQ bmy_17000T0/1-233 VQQLALRDEL EFEKEVKNSF ISVLIEVQNK QKEHKETAKK KKKLKNSSSQ ENSP00000368547/1-380 VQQLALRDEL EFEKEVKNSF ISVLIEVQNK QKEHKETAKK KKKLKNGSSQ ENSTTRP00000004906/1-376 VQQLALRDEL EFEKEVKNSF ISVLIEVQNK QKEHKETAKK KKKLKNSSSQ ENSBTAP00000011880/1-376 VQQLALRDEL EFEKEVKNSF ISVLIEVQNK QKEHKETAKK KKKLKNGSSQ 301 350 BACU014602/1-402 NGKNERSHLP GT-------- ---------- ---------Y LTTVIPYEKK bmy_17000T0/1-233 NGKNERSHLP GT------VS DVLQVASHTG NGFSGH---- -SSAPGQQRR ENSP00000368547/1-380 NGKNERSHMP GTRFSMEGIS NVIQNGLRHT FGNSGGEKQY LTTVIPYEKK ENSTTRP00000004906/1-376 NGKNERSHLP GTRFSMEGIS NVIQNGLRHT FGNSGGEKQY LTTVIPYEKK ENSBTAP00000011880/1-376 NGKNERSHMP GTRFSMEGIS NVIQNGLRHT FGNSGGEKQY LTTVIPYEKK 351 400 BACU014602/1-402 NGPPSIEDLQ ILTKILRAMK EDSEKVPSLL TDYILKGVDT EDLRKVASVI bmy_17000T0/1-233 AGPVSY---- ---------- ---------- ---------- ---------- ENSP00000368547/1-380 NGPPSVEDLQ ILTKILRAMK EDSEKVPSLL TDYILKVLCP T--------- ENSTTRP00000004906/1-376 NGPPSIEDLQ ILTKILRAMK EDSEKVPSLL TDYILKGLLP I--------- ENSBTAP00000011880/1-376 NGPPSVEDLQ ILTKILRAMK EDSEKVPSLL TDYILKVLCP T--------- 401 450 BACU014602/1-402 LGTLEEGRMK EGTVRSVNSP KGNMNGDGVR DRERREKEKK NGLS bmy_17000T0/1-233 ---------- ---------- ---------- ---------- ---- ENSP00000368547/1-380 ---------- ---------- ---------- ---------- ---- ENSTTRP00000004906/1-376 ---------- ---------- ---------- ---------- ---- ENSBTAP00000011880/1-376 ---------- ---------- ---------- ---------- ----