KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:44:14 2014 Check: 00 .. Name: ENSTTRP00000001157/1-1114 Len: 1137 Check: 2575 Weight: 1.00 Name: ENSP00000329117/1-1135 Len: 1137 Check: 3851 Weight: 1.00 Name: bmy_14195T0/1-1129 Len: 1137 Check: 5566 Weight: 1.00 Name: ENSBTAP00000011639/1-1119 Len: 1137 Check: 5498 Weight: 1.00 // 1 50 ENSTTRP00000001157/1-1114 METQKDEAAQ AKGTAVSVDT QDQWAEKGAK SKAAEMTEGP ASEQPSSGPG ENSP00000329117/1-1135 METQKDEAAQ AKGAAASGST REQTAEKGAK NKAAEATEGP TSEPSSSGPG bmy_14195T0/1-1129 METQKDEAAQ AKGTAVSVDT QDQWAEKGAK NKAAEMTEGP ASEQPSSGPG ENSBTAP00000011639/1-1119 METRKDEAAQ AKGTTVSMDT QDQGTEKGAK NKASETTERP TSEPPSSGPG 51 100 ENSTTRP00000001157/1-1114 RLKK-AMKLF R--------- -----GRSKG SGKGSSKKGL SKSKTHDG-S ENSP00000329117/1-1135 RLKKTAMKLF GGKKGICTLP SFFGGGRSKG SGKGSSKKGL SKSKTHDGLS bmy_14195T0/1-1129 RLKKTAMKLF GGKKSICTLP SFFGGGRSKG SRKGSSKKGL SKSKTHDGLS ENSBTAP00000011639/1-1119 RLKKTAMKLF GGKKGICTLP SFFGGGRSKG SGKGSSKKGL SKSKTHDGLS 101 150 ENSTTRP00000001157/1-1114 EAVHG-EDIV SEGDGLS-PL RESSCRLPGS QSAHGSLEAD SRRKTSVAGA ENSP00000329117/1-1135 EAAHGPEDVV SEGTGFSLPL PELPCQFPSS QSAHGALETG SRCKTSVAGA bmy_14195T0/1-1129 EAVHGPEDIV SEGNGLSLPL PESSCRLPSS QSAHGSLETD SRCKTSVAGA ENSBTAP00000011639/1-1119 EAVHDPEDIV SEGTGLSLPL PESSCQLPSS QSVHGSLETD SRCKRSVAGA 151 200 ENSTTRP00000001157/1-1114 TEKARAEKAP FVPKPKKGLK GFFSSIRRHR KSKVSGAEQS DPRAKEPEGA ENSP00000329117/1-1135 TEKAVAEKFP SMPKPKKGLK GFFSSIRRHR KSKVTGAEQS EPGAKGPERV bmy_14195T0/1-1129 TEKARAEKAP FVPKPKKGLK GFFSSIRRHR KSKVSGAEQS DPRAKEPEGA ENSBTAP00000011639/1-1119 TEKAGAEKAH FVPKPKKGLK GFFSSIRRHR KSKVSGAEQS NPGAKESEGA 201 250 ENSTTRP00000001157/1-1114 RDRPHEHVSS A-LLSHT-EN LQAPRKENAK SQDVPGPKVS SVPETSPAAT ENSP00000329117/1-1135 RARPHEHVSS APQVPCFEET FQAPRKENAN PQDAPGPKVS PTPEPSPPAT bmy_14195T0/1-1129 RGRPHEHVSS A-LLSHT-ET LQAPRKENAK SQDVPGPKVS SVPETSPAAT ENSBTAP00000011639/1-1119 RARPHEYVSS A-LLSHADEV LQAPRKENAK FQDVPGPNIP SISETSLAAT 251 300 ENSTTRP00000001157/1-1114 EQTACKDPEK TMEACASALL QPKPAPEASG PEEPHSPETG EKVVSGEVNP ENSP00000329117/1-1135 EKMACKDPEK PMEACASAHV QPKPAPEASS LEEPHSPETG EKVVAGEVNP bmy_14195T0/1-1129 EQTACKDPEK TMEACASALL QPKPAPEASG PEEPHSPETG EKFVAGEVNP ENSBTAP00000011639/1-1119 EKAAFKDAEK TLEAFVSAFL QPKPAPEASG PEEFHSPETG EKLVAGEVNP 301 350 ENSTTRP00000001157/1-1114 PNGPVGDQLS LLFGDVTSLK SFDSLTGCGD IIAEQDMDSM TDSMASGGQR ENSP00000329117/1-1135 PNGPVGDPLS LLFGDVTSLK SFDSLTGCGD IIAEQDMDSM TDSMASGGQR bmy_14195T0/1-1129 PNGPVGDQLS LLFGDVTSLK SFDSLTGCGD IIAEQDMDSM TDSMASGGQR ENSBTAP00000011639/1-1119 PNGPLGDQLS LLFGDVTSLK SFDSLTGCGD IIAEQDMDSM TDSMASGGQR 351 400 ENSTTRP00000001157/1-1114 ANRDGTKRSS CLVTYQGGGE EMALADDDD- EEEEEEEVEL EEEEEEVK-E ENSP00000329117/1-1135 ANRDGTKRSS CLVTYQGGGE EMALPDDDDE EEEEEEEVEL EEEEEEVKEE bmy_14195T0/1-1129 ANRDGTKRSS CLVTYQGGGE EMALPDDDD- EEEEEEEVEL EEEEEEVK-E ENSBTAP00000011639/1-1119 ANRDGTKRSS CLVTYQGGGE EMALPDDDD- EEEEEEEVEL -EEGEEVK-E 401 450 ENSTTRP00000001157/1-1114 EEDDDLEYLW TSSQVYPRPI LNPGYHPTTS SGHLGYMLLD PVRSYPGLGP ENSP00000329117/1-1135 EEDDDLEYLW ETAQMYPRPN MNLGYHPTTS PGHHGYMLLD PVRSYPGLAP bmy_14195T0/1-1129 EEDDDLEYLW ASSQVYPRPI LNPGYHPTTS PGHLGYMLLD PVRSYPGLAP ENSBTAP00000011639/1-1119 EEDDDLEYLW ASSQMYPRPI LNPGYHPTTS PGHLGYMLLD PVRSYPGSAP 451 500 ENSTTRP00000001157/1-1114 GDLLTPQSDQ QESAPNSDEG YYDSTTPGLE DDSGEALGIV HRDCLPRDSY ENSP00000329117/1-1135 GELLTPQSDQ QESAPNSDEG YYDSTTPGFE DDSGEALGLV RRDCLPRDSY bmy_14195T0/1-1129 GDLLTPQSDQ QESAPNSDEG YYDSTTPGLE DDSGEALGLV RRDCLPRDSY ENSBTAP00000011639/1-1119 GELLTPQSDQ QESAPNSDEG YYDSTTPGLE DDSGEALGLV HRDCLPRDSY 501 550 ENSTTRP00000001157/1-1114 SGDALYEFYE PDDSLENSPP GDDCLYDLHG HSSEMFDPFL NFEPFSSSRP ENSP00000329117/1-1135 SGDALYEFYE PDDSLENSPP GDDCLYDLHG RSSEMFDPFL NFEPFLSSRP bmy_14195T0/1-1129 SGDALYEFYE PDDSLENSPP GDDCLYDLHG HSSEMFDPFL NFEPFSSSRP ENSBTAP00000011639/1-1119 SGDALYEFYE PDDSLENSPP GDDCLYDLHC HSSEMFDPFL NFEPFSSPRP 551 600 ENSTTRP00000001157/1-1114 PGAMETEEER LVTIQKQLLY WELRREQREA REACAREAHT REAYTQETHT ENSP00000329117/1-1135 PGAMETEEER LVTIQKQLLY WELRREQLEA QEARAREAHA REAHAREAYT bmy_14195T0/1-1129 PGAMETEEER LVTIQKQLLY WELRREQREA REACAREAHT REAYTQEAHT ENSBTAP00000011639/1-1119 PGAMETEEER LVAIQKQLLY WELQREQREA REACAQEAH- ---------T 601 650 ENSTTRP00000001157/1-1114 REAHAREAHT REAYVREARA REAYAREACG REVRAREAQV REVQVRQEKP ENSP00000329117/1-1135 REAYGREAYA REAHTWEAHG REARTREAQA REVRCRETQV RETQARQEKP bmy_14195T0/1-1129 REAHAREAHT RDAYVREARA REAYARETCG REVRAREAQV REVQVRQEKP ENSBTAP00000011639/1-1119 REAHAREAHT REAYVREARP REAYAREACG QEVCGRELQV REAQVRQEKP 651 700 ENSTTRP00000001157/1-1114 IMEYQMRPLG PSVMGLVEGA SGASQTSHRG TTSAFPATAS SEPDWRDFRP ENSP00000329117/1-1135 VLEYQMRPLG PSVMGLAAGV SGTSQISHRG ITSAFPTTAS SEPDWRDFRP bmy_14195T0/1-1129 IMEYQMRPLG PSVMGLVEGA SGASQTSHRG TTSAFPATAS SEPDWRDFRP ENSBTAP00000011639/1-1119 VIEYQMRPLG PSVMGLVEGA SGASQTSHRG TTSAFPATAS SEPDWRDFRP 701 750 ENSTTRP00000001157/1-1114 LEKRFEGTCS KKDQSTCLMQ LFQSDAMFEP DMQEANFGGS PRRAYPTYSP ENSP00000329117/1-1135 LEKRYEGTCS KKDQSTCLMQ LFQSDAMFEP DMQEANFGGS PRRAYPTYSP bmy_14195T0/1-1129 LEKRFEGTCS KKDQSTCLMQ LFQSDAMFEP DMQEANFGGS PRRAYPTYSP ENSBTAP00000011639/1-1119 LEKRFEGTCS KKDQSTCLMQ LFQSDAMFEP DMQEANFGGS PRRAYPTYSP 751 800 ENSTTRP00000001157/1-1114 PEEPEEEEVE KEGNVTVSFS QALVEFTSNG NLFSSMSCSS DSDSSFTQNL ENSP00000329117/1-1135 PEDPEEEEVE KEGNATVSFS QALVEFTSNG NLFSSMSCSS DSDSSFTQNL bmy_14195T0/1-1129 PEEPEEEEVE KEGNATVSFS QALVEFTSNG NLFSSMSCSS DSDSSFTQNL ENSBTAP00000011639/1-1119 PEEPEEEDVE KEGNATVSFS QALVEFTSNG NLFSSMSCSS DSDSSFTQNL 801 850 ENSTTRP00000001157/1-1114 PELPPMVTFD IADVERDGEG KCEDNPE-HN DXXXXXXXXX XXXXXXXXXX ENSP00000329117/1-1135 PELPPMVTFD IADVERDGEG KCEENPEFHN DEDLAASLEA FELGYYHKHA bmy_14195T0/1-1129 PELPPMVTFD IADVERDGEG KCEENPEFHN DEDLAASLEA FELGYYQKRA ENSBTAP00000011639/1-1119 PELPPMVTFD IADVERDGEG KCEENPEFHN DEDLAASLEA FELGYYQKHA 851 900 ENSTTRP00000001157/1-1114 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000329117/1-1135 FNNYHSRFYQ GLPWGVSSLP RYLGLPGLHP RPPPAAMALN RRSRSLDTAE bmy_14195T0/1-1129 FNNYHSRFYQ GLPWGVSSLP RYLGLPGMHP RPPPAAMALN RRSRSLDTAE ENSBTAP00000011639/1-1119 FNNYRSRFYQ GLPWGVSSLP RYLGLPGMHP RPPPAAMALS RRSRSLDTAE 901 950 ENSTTRP00000001157/1-1114 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000329117/1-1135 TLEMELSNSH LVQGYLESDE LQAQQEDSDE EDEEEEEGEW SRDSPLSLYT bmy_14195T0/1-1129 TLELELSNSH LGQGYMESDE LQAQQEDSDE EEEE----EW GRDSPLSLYT ENSBTAP00000011639/1-1119 TLELELSNSH LTQGYMESDE LQAQQEDSEE EEEEE---EW GRDSPLSLYT 951 1000 ENSTTRP00000001157/1-1114 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXSLYG QAVCCISPVA ENSP00000329117/1-1135 EPPGAYDWPA WAPCPLPVGP GPAWISPNQL DRPSSQSPYR QATCCIPPMT bmy_14195T0/1-1129 EPPGTYDWPA WAPCPLTVGP GPAGISPSQL DGPSSQSLYR QAVCCISPVA ENSBTAP00000011639/1-1119 EPPVTYDWPA WAPCPLPVGP GHAWISPSQL DGPSSH-PFG QAVCCISPFT 1001 1050 ENSTTRP00000001157/1-1114 MSMLLSVSGP EPRAPGEAKS QLARPSHLPL PMGPCYNLQR KASQSPRARP ENSP00000329117/1-1135 MSISLSV--P ESRAPGESGP QLARPSHLHL PMGPCYNLQP QASQSMRARP bmy_14195T0/1-1129 MSMLLSVSGP EPRAPGESKS QLARPSHLPL PTGPCYNLQP KASQSLRARP ENSBTAP00000011639/1-1119 MSMLLSVSGP EPRAPGESKS QLARPSHLPL PMGPCYNLQP KASQSVRARP 1051 1100 ENSTTRP00000001157/1-1114 RDVLLPVDEP SCSSIPGGFS PSPLPQAKPV GITHGIPQLP RVRPEPPEPQ ENSP00000329117/1-1135 RDVLLPVDEP SCSSSSGGFS PSPLPQAKPV GITHGIPQLP RVRPEHPQPQ bmy_14195T0/1-1129 RDVLLPVDEP SCSSISGGFS PSPLPQAKPV GITHGIPQLP RVRPEPTEPQ ENSBTAP00000011639/1-1119 QDVLLPVDEP SCSSISGGFS PSPVPQAKPV GITHGIPQLP RIRPEPPEPQ 1101 1150 ENSTTRP00000001157/1-1114 PIHYGASSLD LSKERAEQGA SLPTSYSSTA MNGNLAE ENSP00000329117/1-1135 PTHYGPSSLD LSKERAEQGA SLATSYSSTA MNGNLAK bmy_14195T0/1-1129 PIHYGASSLD LSKERAEQGA SLPTSYSSTA MNGNLAE ENSBTAP00000011639/1-1119 PIHYGASRLD LSKEKAEQGA SLPTSCSSTA MNGKLAE