KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:39 2014 Check: 00 .. Name: ENSP00000354483/1-1158 Len: 1162 Check: 7310 Weight: 1.00 Name: ENSBTAP00000011408/1-1075 Len: 1162 Check: 406 Weight: 1.00 Name: ENSTTRP00000008067/1-1157 Len: 1162 Check: 9572 Weight: 1.00 Name: bmy_14254T0/1-1108 Len: 1162 Check: 2138 Weight: 1.00 Name: BACU004240/1-1010 Len: 1162 Check: 3336 Weight: 1.00 // 1 50 ENSP00000354483/1-1158 MATRKDTEEE QVVPSEEDEA NVRAVQAHYL RSPSPSQYSM VSDAETESIF ENSBTAP00000011408/1-1075 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008067/1-1157 MATSGDPEEE QVVPSEEDEA NMRAVQARYL RSPSPSQYSM VSDAETESIF bmy_14254T0/1-1108 ---------- ---------- ---------- ---------- ---------- BACU004240/1-1010 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000354483/1-1158 MEPIHLSSAI AAKQIINEEL KPPGVRADAE CPGMLESAEQ LLVEDLYNRV ENSBTAP00000011408/1-1075 ---------- ---------- ---------- ---MLESAEQ LLVEDLYNRV ENSTTRP00000008067/1-1157 MEPIHLSSAV AAKQIINEEL KPRGVKAETK GPGMLESAEQ LLVEDLYNRV bmy_14254T0/1-1108 MEPIHLSSAV AAKQIINEEL KPQGVKAEAE CPGMLESAEQ LLVEDLYNRV BACU004240/1-1010 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000354483/1-1158 REKMDDTSLY NTPCVLDLQR ALVQDRQEAP WNEVDEVWPN VFIAEKSVAV ENSBTAP00000011408/1-1075 REKMDDTSLY NTPCILDLQR ALVQDRQEAP WNEVDEVWPN VFIAEKSVAV ENSTTRP00000008067/1-1157 REKMDDTSLY NTPCILDLQR ALAQDRQEAP WNEVDEVWPN VFIAEKSVAV bmy_14254T0/1-1108 REKTDDTSLY NTPCILDLQR ALAQDRQEAP WNEVDEVWPN VFIAEKSVAV BACU004240/1-1010 ---------- ---------- ---------- ---------- -------VAV 151 200 ENSP00000354483/1-1158 NKGRLKRLGI THILNAAHGT GVYTGPEFYT GLEIQYLGVE VDDFPEVDIS ENSBTAP00000011408/1-1075 NKGRLKRLGI THILNAAHGT GVYTGPEFYT GLEIQYLGVE VDDFPEVDIS ENSTTRP00000008067/1-1157 NKGRLKRLGI THILNAAHGT GVYTGPEFYT GLEIQYLGVE VDDFPEVNIS bmy_14254T0/1-1108 NKGRLKRLGI THILNAAHGT GVYTGPEFYT GLEIQYLGVE VDDFPEVNIS BACU004240/1-1010 NKGRLKRLGI THILNAAHGT GVYTGPEFYT GLEIQYLGVE VDDFPEVNIS 201 250 ENSP00000354483/1-1158 QHFRKASEFL DEALLTYRGK VLVSSEMGIS RSAVLVVAYL MIFHNMAILE ENSBTAP00000011408/1-1075 QHFRKAAEFL DEALLTYRGK VLVSSEMGVS RSAVLVVAYL MIFHNMAVLE ENSTTRP00000008067/1-1157 QHFRKAAEFL DEALLTYRGK VLVSSEMGIS RSAVLVVAYL MIFHNMTILE bmy_14254T0/1-1108 QHFRKAAEFL DEALLTYRGK VLVSSEMGIS RSAVLVVAYL MIFHNMAILE BACU004240/1-1010 QHFRKAAEFL DEALLTYRGK VLVSSEMGIS RSAVLVVAYL MIFHNMAILE 251 300 ENSP00000354483/1-1158 ALMTVRKKRA IYPNEGFLKQ LRELNEKLME EREEDYGREG GSAEAEEGEG ENSBTAP00000011408/1-1075 ALMTVRKKRA IYPNDGFLKQ LRELNEKLME EREEDFSREC GEEAVEEGED ENSTTRP00000008067/1-1157 ALMTVRKKRA IYPNDGFLKQ LRELNEKLME EREEDFGREG GEEEAEEGED bmy_14254T0/1-1108 ALMTLRKKRA IYPNDGFLKQ LRELNEKLME EREEDFGREG GEEEAEEGED BACU004240/1-1010 ALMTLRKKRA IYPNDGFLKQ LRELNEKLME EREEDFGREG GEEEAEEGED 301 350 ENSP00000354483/1-1158 TGSMLGARVH ALTVEEEDDS ASHLSGSSLG KATQASKPLT LIDEEEEEKL ENSBTAP00000011408/1-1075 AGSTVAARVH TLTVEEEDDA ASHLSTSSLG RASQASKPLT LIDEEEEERL ENSTTRP00000008067/1-1157 ARSTVGARVH ALTVEEEDDA TSHLSSSSLG EASRASKPLT LIDEEEEEKL bmy_14254T0/1-1108 AGSTVGARVH ALTVEEEDDA TSHLSSSSLG KASRASKPLT LIDEEEEEKL BACU004240/1-1010 AGSTVGARVH ALTVEEEDDA TSHLSSSSLG KASRASKPLT LIDEEEEEKL 351 400 ENSP00000354483/1-1158 YEQWKKGQGL LSDKVPQDGG GWRSASSGQG GEELEDEDVE RIIQEWQSRN ENSBTAP00000011408/1-1075 YEAWKKGQSL PTGKVLQGED DRFSASSRQG -EEPEDEDVE RIIREWQSRN ENSTTRP00000008067/1-1157 YEAWKKGQGL PTGKVPQGGD DRRSASSGQS EQEPENEDVE RIVREWQSRN bmy_14254T0/1-1108 YEAWKKGQGL PTGKVPQGGD DRRSASSSQG EEEPEDEDVE RIIREWQSRN BACU004240/1-1010 YEAWKKGQGV PTGKVPQGGD DRRSASSGQG -EEPEDEDVE RIIREWQSRN 401 450 ENSP00000354483/1-1158 ERYQAEGYRR WGREEEKEEE SDAGSSVGRR RR-TLSESSA WESVSSHDIW ENSBTAP00000011408/1-1075 ERYQAEGHRR WNREEEEEEE SNGSSFVRRR RRHTLSESST SESVSSHDIR ENSTTRP00000008067/1-1157 ERYQAEGHRK WSREEEEEEE GDDGSFVSRR RRHVTSESST SDSVSSHDIR bmy_14254T0/1-1108 ERYQGEGHRK WDREEEEEEE GDDGSFVRRR RRHTMSESST SESVSSDDIR BACU004240/1-1010 ERYQAEGHRK WDREEEEEEE GDDGSFVRRR RRHTMSESST SESVSSQDIR 451 500 ENSP00000354483/1-1158 VLKQQLELNR PDHGRRRRAD SMSSESTWDA WNERLLEIEK EASRRYHAKS ENSBTAP00000011408/1-1075 VLKQQLQMSS QNRGGRRRSD SMSTESTWDM WDQRLQEIEK EASRKYHSRN ENSTTRP00000008067/1-1157 VLKQQLEMS- LNRGGRRRSD SVSTESTWDT WNQRLLEIEK EASRRYHSRS bmy_14254T0/1-1108 VLKQQLEMSS QNRGGRRRSD SVSTESTWDV WNQRLLEIEK EASRKYHSRS BACU004240/1-1010 ILKQQLEMSS QNRGGRRRSD SVSTESTWDM WNQRLLEIEK EASRKYHSRS 501 550 ENSP00000354483/1-1158 KREEAADRSS EAGSRVREDD EDSVGSEASS FYNFCSRNKD KLTALERWKI ENSBTAP00000011408/1-1075 KREE-VDASS EVGSRAREDD EESVASEASS FYNFCSRNKD KLTALERWKI ENSTTRP00000008067/1-1157 KREE-GDASP EVGSGAREDD EESVSSEASS FYNFCHRNKD KLTALERWKI bmy_14254T0/1-1108 KREE-VDASS EVGNGAREDD EESVYSEASS FYNFCNRNKD KLTALERWKI BACU004240/1-1010 KREE-VDGSS EVGNRAREDD EESVYSEASS FYNFCNRNKD KLTALERWKI 551 600 ENSP00000354483/1-1158 KRIQFGFHKK DLGAGDSSGE PGAEEAVGE- KNPSDVSLTA YQAWKLKHQK ENSBTAP00000011408/1-1075 KRIQFGFHKK DSEAGDGSSE QGAEEVEGEK KNLSDVNLSA YQAWKLKHQK ENSTTRP00000008067/1-1157 KRIQFGFHKK DSEAGDGSSE QRAEEAEREK KNLSDVNLSA YQAWKLKHQ- bmy_14254T0/1-1108 KRIQFGFHKK DLEAGDGSSE QRAEEAKGEK KNLSDVNLSA YQAWKLKHQ- BACU004240/1-1010 KRIQFGFHKK DSEAGDGSSE QRAEEAKGEK KNLSDVSLSA YQAWKLKHQ- 601 650 ENSP00000354483/1-1158 KVGSENKEEV VELSKGEDSA LAKKRQRRLE LLERSRQTLE ESQSMASWEA ENSBTAP00000011408/1-1075 KVGSENKEEV VELSKGDDLA LVKKRQRRLE LLERSRQTLE ESQSMGSWEA ENSTTRP00000008067/1-1157 KVGSENKEEV LELSKGEDSA LAKKRQRRLE LLERSRQTLE ESQSMGSWEA bmy_14254T0/1-1108 KVGSDNKEEV VELSKGEDSA LAKKRQRRLE LLERSRQTLE ESQSMGSWEA BACU004240/1-1010 KVGSENKEEV VELSKGEDSA LAKKRQRRLE LLERSRQTLE ESQSMGSWEA 651 700 ENSP00000354483/1-1158 DSSTASGSIP LSAFWSADPS VSADGDTTSV LSTQSHRSHL SQAASNIAGC ENSBTAP00000011408/1-1075 DSSAASGSIP LSAFWSAAPS VSADGDTASV LSAQSHSSHP SQALSKVGGC ENSTTRP00000008067/1-1157 DSSAASGSIP LSAFWSAAPS VSAGGDTGSV LSAQSHSSHP CQALSNAGGC bmy_14254T0/1-1108 DSSAASGSIP LSAFWSAAPS VSAGGDTMSV LSAQSHSSHP SQALSNVGGC BACU004240/1-1010 DSSAASGSIP LSAFWSAAPS VSAGGDTMSV LSAQSHSSHP SQALSNVGGC 701 750 ENSP00000354483/1-1158 STSNPTTPLP NLPVGPGDTI SIASIQNWIA NVVSETLAQK QNEMLLLSRS ENSBTAP00000011408/1-1075 LASTPTTPLP NLHVGPGDTI SIASIQNWIA NVVSETLAQK QNEMLLSPRP ENSTTRP00000008067/1-1157 SASASTTPLP NLPVGPGDTI SIASIQNWIV NVVSETLTQK QNEGLLLSRS bmy_14254T0/1-1108 LASAPTTPLP NLPVGPGDTI SIASIQNWIV NVVSETLTQK QNEGLLLSRS BACU004240/1-1010 LASAPTTPLP NLPVGPGDTI SIASIQNWIV NVVSETLTQK QNEGLLLSRS 751 800 ENSP00000354483/1-1158 PSVASMKAVP AASCLGDDQV SMLSGHSSSS LGGCLLPQSQ ARPSSDMQSV ENSBTAP00000011408/1-1075 LSVVSMKAAP AGSCLGDDQV SMLSGQSSSA LGGCLLPQSQ ARPSSETQSV ENSTTRP00000008067/1-1157 PSVASMKVAP AASCLGDDQV SMLSGQSNSS LGGCLLPQSQ ARPSSDTQSM bmy_14254T0/1-1108 PSVASMKVAP AASCLGDDQV SMLSGQSDSS LGGCLLPQSQ ARPSSDTLSM BACU004240/1-1010 PSVASMKVAP AASCLGDDQV SMLSGQSDSS LGGCLLPQSQ ARPSSNTQSM 801 850 ENSP00000354483/1-1158 LSCNTTLSSP AESCRSKVRG TSKPIFSLFA DNVDLKELGR KEKEMQMELR ENSBTAP00000011408/1-1075 LSSH-TMSAR AEGTGSKVKG TSKPIYSLFA DNIDLKELGR KEKEMQTELR ENSTTRP00000008067/1-1157 LSTHITRSSR AEGTGSKVRG TSKPICSLFA DSVDLKELGR KEKEMQTELR bmy_14254T0/1-1108 LSTHITRSSR AEGTGSKVRG TSKPICSLFA DSVDLKELGR KEKEMQTELR BACU004240/1-1010 LSTHITRSSR AEGTGSKVRG TSKPICSLFA DSVDLKELGR KEKEMQTELR 851 900 ENSP00000354483/1-1158 EKMSEYKMEK LASDNKRSSL FKKKKVK--E DEDDGVGDGD EDTDSAIGSF ENSBTAP00000011408/1-1075 EKMSEYKMEK LASDNKRSSL FKKKKVKEDE DEDDDVGDRD EDTDSAIGSF ENSTTRP00000008067/1-1157 EKMSEYKMEK LASDNKRSSL FKKKKVK--E DEDDDVGDRD EDTDSAIGSF bmy_14254T0/1-1108 EKMSEYKMEK LASDNKRSSL FKKKKVR--E DEDDDVGDRD EDADSAIGSF BACU004240/1-1010 EKMSEYKMEK LASDNKRSSL FKKKKVR--E DEDDDVGDRD EDADSAIGSF 901 950 ENSP00000354483/1-1158 RYSSRSNSQK PETDTCSSLA VCDHYASGSR VGKEMDSSIN KWLSGLRTEE ENSBTAP00000011408/1-1075 RYSSRSNSQK PETDTFSSLA VSDGYGSGSR AGREKDNSIN KWLSGLRTEE ENSTTRP00000008067/1-1157 RYSSRSDSQK PETDTSSSLA VSDSYGSGSR AGKEMESSIN KWLSGLRTEE bmy_14254T0/1-1108 RYSSRSNSQK PETDTSSSLA VSDSYGSGSR AGKEMDSSVN KWLSGLRTEE BACU004240/1-1010 RYSSRSNSQK PETDTSSSLA VSDSYGSGSR AGKEMDSSIN KWLSGLRTEE 951 1000 ENSP00000354483/1-1158 KPPFQSDWSG SSRGKYTRSS LLRETESKSS SYKFSKSQSE EQDTSSYHEA ENSBTAP00000011408/1-1075 KSP-QSDWSG SSREKCTRSS LIRETESKSS SYKFSKSRSE EQDTSSYDET ENSTTRP00000008067/1-1157 KSPPQSDWSG TSRGKCTRSS LLRETESKSS SYKFSKSRSE EQDTSSYHEA bmy_14254T0/1-1108 KSPPQSDWSG SSRGKYTRSS LLWETESKSS SYKFSKSRSE EQDTSSYHEA BACU004240/1-1010 KSPPQSDWSG SSRGKYTRSS LLWETESKSS SYKFSKSRSE EQDTSSYHEA 1001 1050 ENSP00000354483/1-1158 NGNSVRSTSR FSSSSTREGR EMHKFSRSTY NETSSSREES PEPYFFRRTP ENSBTAP00000011408/1-1075 NSNSVKSTSR FSASSTREGR EMHTFSRSMF SETSSSREES PEPYFFRRTP ENSTTRP00000008067/1-1157 NGNSVRSTSR FSASSTREGR EMHTFSRSMF SETSSSREES PEPYFFRRTP bmy_14254T0/1-1108 NGNSVRSTSR FSASSTREGR EMHTFSRSMF SETSSSREGS PEPYFFRRTP BACU004240/1-1010 NGNSVRSTSR FSASSTREGR EMHTFSRSMF SETSSSREGS PEPYFFRRTP 1051 1100 ENSP00000354483/1-1158 ESSEREESPE PQRPNWARSR DWEDVEESSK SDFSEFGAKR KFTQSFMRSE ENSBTAP00000011408/1-1075 EPSEGEESPE PRRPNGTRSR DWEDVEESSK SDFSEFGAKR KFTQSFMRSE ENSTTRP00000008067/1-1157 EPSEGDESPE PRRPNWARPR DWEDVEESSK SDFSEFGAKR KFTQSFMRSE bmy_14254T0/1-1108 EPSEGEESPE PQHPNWARPR DWEDVEESSK SDFSEFGAKR KFTQSFMRSE BACU004240/1-1010 EPSEGEESPE PQRPNWARPR DWEDVEESSK SDFSEFGAKR KFTQSFMRSE 1101 1150 ENSP00000354483/1-1158 EEGEKERTEN REEGRFASGR RSQYRRSTDR EEEEEMDDEA IIAAWRRRQE ENSBTAP00000011408/1-1075 EEGEKARMEK KEEGRFASGR QSRYWRSTDR EEEEEMDDEA IIAAWRRRQE ENSTTRP00000008067/1-1157 EEGEKERTEK REEGRFASGR RSQYRRSTDR EEEEEMDDEA IIAAWRRRQE bmy_14254T0/1-1108 EEGEKESMEK REEGRFASGR RSQYRRSTDR EEEEEMDDEA IIAAWRRRQE BACU004240/1-1010 EEGEKERMEK GEEGRFASGR RSQYRRSTDR EEEEEMDDEA IIAAWRRRQE 1151 1200 ENSP00000354483/1-1158 ETRTKLQKRR ED ENSBTAP00000011408/1-1075 ETRTKLQRRR ED ENSTTRP00000008067/1-1157 ETRTKLQRRR ED bmy_14254T0/1-1108 ETRTKLQRRR ED BACU004240/1-1010 ETRTKLQRRR ED