KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:21 2014 Check: 00 .. Name: ENSTTRP00000006065/1-466 Len: 663 Check: 3275 Weight: 1.00 Name: ENSP00000464034/1-581 Len: 663 Check: 5016 Weight: 1.00 Name: ENSBTAP00000011251/1-578 Len: 663 Check: 3963 Weight: 1.00 Name: BACU006989/1-510 Len: 663 Check: 609 Weight: 1.00 Name: bmy_14041T0/1-641 Len: 663 Check: 2297 Weight: 1.00 // 1 50 ENSTTRP00000006065/1-466 ---------- ---------- ---------- ---------- ---------- ENSP00000464034/1-581 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011251/1-578 ---------- ---------- ---------- ---------- ---------- BACU006989/1-510 ---------- ---------- ---------- ---------- ---------- bmy_14041T0/1-641 MQGAELRDGE AAAAAASYRV LSRLLGYGEA APEPGPPPPP PGHGPAPPPF 51 100 ENSTTRP00000006065/1-466 ---------- ---------- ---------- ---------- ---------- ENSP00000464034/1-581 ---------- ----MVFRNV GRPPEEEDVE AAPEPGPSEL LCPRHRCALD ENSBTAP00000011251/1-578 ---------- ----MVFRNV GRPPEEEDAE AAQEPGPSEL LCPRHRCALD BACU006989/1-510 ---------- ---------- ---------- ---------- ---------- bmy_14041T0/1-641 LARPGPRGSR PPQLMVFRNV GRPPEEEDAE AAREPGPSEL LCPRHRCALD 101 150 ENSTTRP00000006065/1-466 ---------- ---------- ---------- ---------- ---------- ENSP00000464034/1-581 PKALPPGLAL ERTWGPAAGL EAQLAALGLG QPAGPGVKTV GGGCCPCPCP ENSBTAP00000011251/1-578 PKALPPGLAL ERTWGPAAGL EAQLAALGLG QPAGPGVKTV GGGCCPCPCP BACU006989/1-510 ---------- ---------- ---------- ---------- --------MH bmy_14041T0/1-641 PKALPPGLAL ERTWGPAAGL EAQLAALGLG QPAGPGVKTV GGGCCPCPCP 151 200 ENSTTRP00000006065/1-466 ---------- ---------- -----DALQI LEGLESEAES VETNSCSEEE ENSP00000464034/1-581 PQPPPPQPQP PAAAPQAGED PTETSDALLV LEGLESEAES LETNSCSEEE ENSBTAP00000011251/1-578 PQPPPPQPQP PAAAPQAGED PTETSDALLV LEGLESEAES LETNSCSEEE BACU006989/1-510 LQPPPPQPQP PAAAPQAGED PTETSDALLV LEGLESEAES LETNSCSEEE bmy_14041T0/1-641 PQPPPPQPQP PAAAPQAGED PTETSDALLV LEGLESEAES LETNSCSEEE 201 250 ENSTTRP00000006065/1-466 LSSPGRGGGG GGRLLLQPPG PELPPVPFLV QDLVPPGRLS RGE-----QQ ENSP00000464034/1-581 LSSPGRGGGG GGRLLLQPPG PELPPVPFPL QDLVPLGRLS RGEQQQQQQQ ENSBTAP00000011251/1-578 LSSPGRGGGG GGRLLLQTPG PELPPVPFPM QDLVPPGRLS RGE----QPQ BACU006989/1-510 LSSPGRGGGG GGRLLLQPPG PELPPVPFPV QDLVPPGRLS RGE-----QQ bmy_14041T0/1-641 LSSPGRGGGG GGRLLLQPPG PELPPVPFPV QDLVPPGRLS RGE-----QQ 251 300 ENSTTRP00000006065/1-466 QPPPPPPPPG PLRPLA---- GPSRKSSLKV RLSRLFRTKS CNGGSGGGDG ENSP00000464034/1-581 QPPPPPPPPG PLRPLA---- GPSRKGSFKI RLSRLFRTKS CNGGSGGGDG ENSBTAP00000011251/1-578 QPPPPPPPPG PLRPLA---- GLSRKGSLKI RLSRLFRTKS CNGGSGGGDG BACU006989/1-510 QAPPPPPPPG PLRPLAXXXX XXXXXSSLRI RLSRLFRTKS CNGGSGGGYG bmy_14041T0/1-641 QAPPPPPPPG PLRPLA---- GPSRKSSLKI RLSRLFRTKS CNGGSGGGDG 301 350 ENSTTRP00000006065/1-466 AGKRPSGELG ASAASLTDVG GFVGRELDAG RKPRLTRTQS AFSPVSFSPL ENSP00000464034/1-581 TGKRPSGELA ASAASLTDMG GSAGRELDAG RKPKLTRTQS AFSPVSFSPL ENSBTAP00000011251/1-578 AGKRPSGELV ASAASLTDMG GSAGRELDAG RKPRLTRTQS AFSPVSFSPL BACU006989/1-510 AGKRPSGELA ASAASLTDVG GFAGRELDAG RKPRLTRTQS AFSPVSFSPL bmy_14041T0/1-641 AGKRPSGELA ASAASLTDVG GFAGRELDAG RKPRLTRTQS AFSPVSFSPL 351 400 ENSTTRP00000006065/1-466 FTGETVSLVD VDISQRGLTS PHPPTPPPPP RRSLSLLDDI SGTLPTSVLV ENSP00000464034/1-581 FTGETVSLVD VDISQRGLTS PHPPTPPPPP RRSLSLLDDI SGTLPTSVLV ENSBTAP00000011251/1-578 FTGETVSLVD VDISQRGLTS PHPPTPPPPP RRSLSLLDDI SGTLPTSVLV BACU006989/1-510 FTGETVSLVD VDISQRGLTS PHPPTPPPPP RRSLSLLDDI SGTLPTSVLV bmy_14041T0/1-641 FTGETVSLVD VDISQRGLTS PHPPTPPPPP RRSLSLLDDI SGTLPTSVLV 401 450 ENSTTRP00000006065/1-466 APMGSSLQSF PLPPPPPPHA PDAFPRIAPL RAAESLHSQP PPPLQCPLYR ENSP00000464034/1-581 APMGSSLQSF PLPPPPPPHA PDAFPRIAPI RAAESLHSQP PQHLQCPLYR ENSBTAP00000011251/1-578 APMGSSLQSF PLPPPPPPHA PDAFPRIAPI RAAESLHSQP PQHLQCPLYR BACU006989/1-510 APMGSSLQSF PLPPPPPPHA PDAFPRIAPL RAAESLHSQP PPPLQCPLYR bmy_14041T0/1-641 APMGSSLQSF PLPPPPPPHA PDAFPRIAPL RAAESLHSQP PPPLQCPLYR 451 500 ENSTTRP00000006065/1-466 PDSSSFAASL RELEKXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000464034/1-581 PDSSSFAASL RELEKCGWYW GPMNWEDAEM KLKGKPDGSF LVRDSSDPRY ENSBTAP00000011251/1-578 PDSSSFAASL RELEKCGWYW GPMNWEDAEM KLKGKPDGSF LVRDSSDPRY BACU006989/1-510 PDSSSFAASL RELEKCGWYW GPMNWEDAEM KLKGKPDGSF LVRDSSDPRY bmy_14041T0/1-641 PDSSSFAASL RELEKCGWYW GPMNWEDAEM KLKGKPDGSF LVRDSSDPRY 501 550 ENSTTRP00000006065/1-466 XXXXXXXXXX XXXXXXXEHY RGTFSLWCHP KFEDRCQSVV EFIKRAIMHS ENSP00000464034/1-581 ILSLSFRSQG ITHHTRMEHY RGTFSLWCHP KFEDRCQSVV EFIKRAIMHS ENSBTAP00000011251/1-578 ILSLSFRSQG ITHHTRMEHY RGTFSLWCHP KFEDRCQSVV EFIKRAIMHS BACU006989/1-510 ILSLSFRSQG ITHHTRMEHY RGTFSLWCHP KFEDRCQSVV EFIKRAIMHS bmy_14041T0/1-641 ILSLSFRSQG ITHHTRMEHY RGTFSLWCHP KFEDRCQSVV EFIKRAIMHS 551 600 ENSTTRP00000006065/1-466 KNGKFLYFLR SRVPGLPPTP VQLLYPVSRF SNVKSLQHLC RFRIRQLVRI ENSP00000464034/1-581 KNGKFLYFLR SRVPGLPPTP VQLLYPVSRF SNVKSLQHLC RFRIRQLVRI ENSBTAP00000011251/1-578 KNGKFLYFLR SRVPGLPPTP VQLLYPVSRF SNVKSLQHLC RFRIRQLVRI BACU006989/1-510 KNGKFLYFLR SRVPGLPPTP VQLLYPVSRF SNVKSLQHLC RFRIRQLVRI bmy_14041T0/1-641 KNGKFLYFLR SRVPGLPPTP VQLLYPVSRF SNVKSLQHLC RFRIRQLVRI 601 650 ENSTTRP00000006065/1-466 DHIPDLPLPK ---------- ---PLISYIR KFYYYDPQEE VYLSLKEAQL ENSP00000464034/1-581 DHIPDLPLPK ---------- ---PLISYIR KFYYYDPQEE VYLSLKEAQL ENSBTAP00000011251/1-578 DHIPDLPLPK ---------- ---PLISYIR KFYYYDPQEE VYLSLKEAQL BACU006989/1-510 DHIPDLPLPK YNGVFRGGAG VEGPLISYIR KFYYYDPQEE VYLSLKEAQL bmy_14041T0/1-641 DHIPDLPLPK ---------- ---PLISYIR KFYYYDPQEE VYLSLKEAQL 651 700 ENSTTRP00000006065/1-466 ISKQKQEVLE PST ENSP00000464034/1-581 ISKQKQEV-E PST ENSBTAP00000011251/1-578 ISKQKQEVLE PST BACU006989/1-510 ISKQKQEVLE PST bmy_14041T0/1-641 ISKQKQEVLE PST