KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:09 2014 Check: 00 .. Name: ENSP00000359049/1-393 Len: 409 Check: 9696 Weight: 1.00 Name: ENSTTRP00000000270/1-386 Len: 409 Check: 5519 Weight: 1.00 Name: ENSBTAP00000011142/1-387 Len: 409 Check: 1126 Weight: 1.00 Name: bmy_15564T0/1-330 Len: 409 Check: 3757 Weight: 1.00 Name: BACU002754/1-400 Len: 409 Check: 4497 Weight: 1.00 // 1 50 ENSP00000359049/1-393 MEEN------ -------NLQ CSSVVDGNFE EVPRETAIQF KPPLYRQRYQ ENSTTRP00000000270/1-386 MAEN------ -------NIE CNSVVDGNVE EVPNKKIIKF NPPLYKQRYQ ENSBTAP00000011142/1-387 ---------- ---LLFINFQ CNSVVDGNVE EVPSKKVIKF NPPLYKQRYQ bmy_15564T0/1-330 MAEN------ -------NIE CNSVVDGNVE EVPNKKIIKF NPPLYKQRYQ BACU002754/1-400 MIRTLPPPPP PPFILFVNFQ CNIVVDGNVE EVPNKKIIKF NPPLYKQRYQ 51 100 ENSP00000359049/1-393 FVKNLVDQHE PKKVADLGCG DTSLLRLLKV NPCIELLVGV DINEDKLRWR ENSTTRP00000000270/1-386 FVKKLVEQHQ PKKVADLGCG DVCLLMILKY QKCIEELVGV DINEGRLKWN ENSBTAP00000011142/1-387 FVKNLVEQHQ PKKVADLGCG DVCLLAILKY QKCVEELVGV DINEGRLKWN bmy_15564T0/1-330 F--------- ---VADLGCG DVCLLVILKY QKCIEELVGV DINEGRLKWN BACU002754/1-400 FVKNLVEQHQ PKKVADLGCG DVCLLVILKY QKCIEELVGV DINEGRLKWN 101 150 ENSP00000359049/1-393 GDSLAPFLGD FLKPRDLNLT ITLYHGSVVE RDSRLLGFDL ITCIELIEHL ENSTTRP00000000270/1-386 GSRLSPCMGD HLDPRELDLV ITLYHGSVLE KDCRLLGFDL VACIELIEHF ENSBTAP00000011142/1-387 GSRLSPCVGD HLDPRELDLA ITLYHGSVLE KDCRLLGFDL AACIELIEHF bmy_15564T0/1-330 G--------- ---------- ---------- ---------- ------IEHF BACU002754/1-400 GSRLSPCMGD HLDPRELDLV ITLYHGSVLE KDCRLLGFDL VACIELIEHF 151 200 ENSP00000359049/1-393 DSGDLARFPE VVFGYLSPSM IVISTPNSEF NPLFPSVTLR DSDHKFEWTR ENSTTRP00000000270/1-386 DSEDLAKFPE VVFGYMSPAM IVISTPNSDF NSLFPSAVFR DSDHKFEWSR ENSBTAP00000011142/1-387 DSEDLAKFPE VVFGYMCPAM IVISTPNSEF NSLFPCAVFR DSDHKFEWSR bmy_15564T0/1-330 DSEDLAKFPE VVFGYMSPAM IVISTPNSDF NSLFPSTVFR DSDHKFEWSR BACU002754/1-400 DSEDLAKFPE VVFGYMSPAM IVISTPNSDF NSLFPSTVFR DSDHKFEWSR 201 250 ENSP00000359049/1-393 MEFQTWALYV ANRYDYSVEF TGVGEPPAGA ENVGY-CTQI GIFRKNGGKA ENSTTRP00000000270/1-386 MQFQTXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXX-XXX ENSBTAP00000011142/1-387 MQFQTWALDV ASRYNYSVEF TGVGEPPTGA EDVGY-CTQI GVFRRK-AEA bmy_15564T0/1-330 MQFQTWALDV ASRYSYSVEF TGVGEPPAGA EDVGW-CTQI GVFRKK-AKA BACU002754/1-400 MQFQTWALDV ANRYSYSVEF TGVGEPPAGA EDVGC-CTQI GVFRKK-AKA 251 300 ENSP00000359049/1-393 TESCLSEQHD QHVYKAVFTT SYPSLQQERF FKLVLVNEVS QQVESL--RV ENSTTRP00000000270/1-386 XXXXXXXXXX XXXXXXIYTT SYPSLQQMDY CRRVVTYLVY REVNRMKRRY ENSBTAP00000011142/1-387 AELAVLEHHG EHVYEVVYTT SYPSLQQINY RRRVVIYLVY REVSRLKQKY bmy_15564T0/1-330 TESAVLEHHG EHVYEVIYTT SYPSLQQMNY CRRVVTYLVY REVNRMKRRC BACU002754/1-400 TESAVLEHHG EHVYEVIYTT SYPSLQQMNY CRRVVTYLVY REVHRMKRRC 301 350 ENSP00000359049/1-393 SHLPRRKEQA GERGDKPKDI GGSKAPVPCF GPVFTEVEKA KIENSPTPFC ENSTTRP00000000270/1-386 QVSLRQHELE PESADTGNPK IHLRPSS--- -PVLTEADKA -MEMIPQPFC ENSBTAP00000011142/1-387 QVSLRQHELE PEFIAPGNQT GKFTSDLPV- -PVLTEDDKA -MEIAPQPFC bmy_15564T0/1-330 QVSLRQHELE PESADPGNPT RKFISDLPV- -PVLTEADKA -MEMTPQPFC BACU002754/1-400 QVSLRQHELE PESADPGNPT RKFISDLPV- -PVLTEADKA -MEMTPQPFC 351 400 ENSP00000359049/1-393 VGDKFFVPLQ RLLAYPKLNR LCANEEMMRS VIADSIPLSS DGSAVVADLR ENSTTRP00000000270/1-386 IGDKFYVPLE RIIAYPRLGH ICGNVEKLRE FLADVVELNC DGSAVKVDLH ENSBTAP00000011142/1-387 IEDKFYVPLQ RIIAYPRLGH LCGNVEKLRE FLGDVIELNC DGSAVKVDLN bmy_15564T0/1-330 IGDKFYVPLE RIIAYPRLRH ICGNVEKLRE FLADVVELNC DGSAVKVDLH BACU002754/1-400 IGDKFYVPLE RIIACPRLRH ICGNVEKLRE FLADVVELNC DGSAVKVDLH 401 450 ENSP00000359049/1-393 NYFDEQFEF ENSTTRP00000000270/1-386 DCGD----Y ENSBTAP00000011142/1-387 DCSD----F bmy_15564T0/1-330 DCGD----Y BACU002754/1-400 DCGD----Y