KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:55 2014 Check: 00 .. Name: ENSTTRP00000011271/1-744 Len: 1612 Check: 4530 Weight: 1.00 Name: BACU012403/1-1595 Len: 1612 Check: 5343 Weight: 1.00 Name: bmy_14128T0/1-738 Len: 1612 Check: 938 Weight: 1.00 Name: ENSP00000359424/1-745 Len: 1612 Check: 8567 Weight: 1.00 Name: ENSBTAP00000009985/1-740 Len: 1612 Check: 3832 Weight: 1.00 // 1 50 ENSTTRP00000011271/1-744 MERPPGLRPG AGGPWEMRER LGTGGFGNVS LYQHRXXXXX XXXXXXXXXX BACU012403/1-1595 ---------- ------MRER LGTGGFGNVC LYQHRELDLK IAIKSCRLEL bmy_14128T0/1-738 MERPPGLRPG AGGPWEMRER LGTGGFGNVC LYQHRELDLK IAIKSCRLEL ENSP00000359424/1-745 MERPPGLRPG AGGPWEMRER LGTGGFGNVC LYQHRELDLK IAIKSCRLEL ENSBTAP00000009985/1-740 MERPPGLRPG AGGPWEMRER LGTGGFGNVC LYQHRELDLK IAIKSCRLEL 51 100 ENSTTRP00000011271/1-744 XXXXXXXXXX XXXXXXXLNH ANVVKACDVP EELNFLINDV PLLAMEYCSG BACU012403/1-1595 STKNRERWCH EIQIMKKLNH ANVVKACDVP EELNFLINDV PLLAMEYCSG bmy_14128T0/1-738 STKNRERWCH EIQIMKKLNH ANVVKACDVP EELNFLINDV PLLAMEYCSG ENSP00000359424/1-745 STKNRERWCH EIQIMKKLNH ANVVKACDVP EELNILIHDV PLLAMEYCSG ENSBTAP00000009985/1-740 STKNRERWCH EIQIMKKLNH ANVVKACDVP EELNFLINDV PLLAMEYCSG 101 150 ENSTTRP00000011271/1-744 GDLRKLLNKP ENCCGLKESQ ILSLLSDIGS GIRYLHENKI IHRDLKPENI BACU012403/1-1595 GDLRKLLNKP ENCCGLKESQ ILSLLSDIGS GIRYLHENKI IHRDLKPENI bmy_14128T0/1-738 GDLRKLLNKP ENCCGLKESQ ILSLLSDIGS GIRYLHENKI IHRDLKPENI ENSP00000359424/1-745 GDLRKLLNKP ENCCGLKESQ ILSLLSDIGS GIRYLHENKI IHRDLKPENI ENSBTAP00000009985/1-740 GDLRKLLNKP ENCCGLKESQ ILSLLSDIGS GIRYLHENKI IHRDLKPENI 151 200 ENSTTRP00000011271/1-744 VLQDVGGKIM HKIIDLGYAK DVDQGSLCTS FVGTLQYLAP ELFENKPYTA BACU012403/1-1595 VLQDVGGKIM HKIIDLGYAK DVDQGSLCTS FVGTLQYLAP ELFENKPYTA bmy_14128T0/1-738 VLQDVGGKIM HKIIDLGYAK DVDQGSLCTS FVGTLQYLAP ELFENKPYTA ENSP00000359424/1-745 VLQDVGGKII HKIIDLGYAK DVDQGSLCTS FVGTLQYLAP ELFENKPYTA ENSBTAP00000009985/1-740 VLQDVGGKIM HKIIDLGYAK DVDQGSLCTS FVGTLQYLAP ELFENKPYTA 201 250 ENSTTRP00000011271/1-744 TVDYWSFGTM VFECIAGYRP FLHHLQPFTX XXXXXXXXXX CIFACEEMTG BACU012403/1-1595 TVDYWSFGTM VFECIAGYRP FLHHLQPFTW HEKIKKKDPK CIFACEEMTG bmy_14128T0/1-738 TVDYWSFGTM VFECIAGYRP FLHHLQPFTW HEKIKKKDPK CIFACEEMTG ENSP00000359424/1-745 TVDYWSFGTM VFECIAGYRP FLHHLQPFTW HEKIKKKDPK CIFACEEMSG ENSBTAP00000009985/1-740 TVDYWSFGTM VFECIAGYRP FLHHLQPFTW HEKIKKKDPK CIFACEEMTG 251 300 ENSTTRP00000011271/1-744 EVRFSSHLPQ PNSLCSLIVE PMENWLQLML NWDPQQRGGP IDLTLKQPRC BACU012403/1-1595 EVRFSSHLPQ PNSLCSLIVE PMENWLQLML NWDPQQRGGP IDLTLKQPRC bmy_14128T0/1-738 EVRFSSHLPQ PNSLCSLIVE PIENWLQLML NWDPQQRGGP IDLTLKQPRC ENSP00000359424/1-745 EVRFSSHLPQ PNSLCSLVVE PMENWLQLML NWDPQQRGGP VDLTLKQPRC ENSBTAP00000009985/1-740 EVRFSSHLPQ PNSLCSLIVE PMENWLQLML NWDPQQRGGP VDLTLKQPRC 301 350 ENSTTRP00000011271/1-744 FVLMDHILNL KIVHILNMTS AKIISFLLPP DESLHSLQSR IERETGINTC BACU012403/1-1595 FVLMDHILNL KIVHILNMTS AKIISFLLPP DESLHSLQSR IERETGINTG bmy_14128T0/1-738 FVLMDHILNL KIVHILNMTS AKIISFLLPP DESLHSLQSR IERETGINTG ENSP00000359424/1-745 FVLMDHILNL KIVHILNMTS AKIISFLLPP DESLHSLQSR IERETGINTG ENSBTAP00000009985/1-740 FVLMDHILNL KIVHILNMTS AKIISFLLPP DESLHSLQSR IERETGINTG 351 400 ENSTTRP00000011271/1-744 SQELLSETGI SLDPRKPASQ CVLDGVRGCD SYMVYLFDKS KTVYEGPFAS BACU012403/1-1595 SQELLSETGI SLDPRKPASQ CVLDGVRGCD SYMIYLFDKS KTVYEGPFAS bmy_14128T0/1-738 SQELLSETGI SLDPRKPASQ CVLDGVRGCD SYMVYLFDKS KTVYEGPFAS ENSP00000359424/1-745 SQELLSETGI SLDPRKPASQ CVLDGVRGCD SYMVYLFDKS KTVYEGPFAS ENSBTAP00000009985/1-740 SQELLSEMGI SLDPRKPASQ CVLDGVRGCD SYMVYLFDKS KTVYEGPFAS 401 450 ENSTTRP00000011271/1-744 RSLSDCVNYI VQDSKIQLPI IQLRKVWAEA VHYVSGLKED YSRLFQGQRA BACU012403/1-1595 RSLSDCVNYI VQDSKIQLPI IQLRKVWAEA VHYVSGLKED YSRLFQGQRA bmy_14128T0/1-738 RSLSDCVNYI VQDSKIQLPI IQLRKVWAEA VHYVSGLKED YSRLFQGQRA ENSP00000359424/1-745 RSLSDCVNYI VQDSKIQLPI IQLRKVWAEA VHYVSGLKED YSRLFQGQRA ENSBTAP00000009985/1-740 RSLSDCVNYI VQDSKIQLPI IQLRKVWAEA VHYVSGLKED YSRLFQGQRA 451 500 ENSTTRP00000011271/1-744 AMLSLLRYNA NLTKMKNTLI SASQQLKAKL EFFHKSIQLD LERYSEQMTY BACU012403/1-1595 AMLSLLRYNA NLTKMKNTLI SASQQLKAKL EFFHKSIQLD LERYSEQMTY bmy_14128T0/1-738 AMLSLLRYNA NLTKMKNTLI SASQQLKAKL EFFHKSIQLD LERYSEQMTY ENSP00000359424/1-745 AMLSLLRYNA NLTKMKNTLI SASQQLKAKL EFFHKSIQLD LERYSEQMTY ENSBTAP00000009985/1-740 AMLSLLRYNT NLTKMKNTLI SASQQLKAKL EFFHKSIQLD LERYSEQMTY 501 550 ENSTTRP00000011271/1-744 GISSEKMLKA WKEMEEKAIH YAEVGVIGYL EDQIMSLHTE IMELQKSPYG BACU012403/1-1595 GISSEKMLKA WKEMEEKAIH YAEVGVIGYL EDQIMSLHTE IMELQKSPYG bmy_14128T0/1-738 GISSEKMLKA WKEMEEKAIH YAEVGVIGYL EDQIMSLHTE IMELQKSPYG ENSP00000359424/1-745 GISSEKMLKA WKEMEEKAIH YAEVGVIGYL EDQIMSLHAE IMELQKSPYG ENSBTAP00000009985/1-740 GISSEKMLKA WKEMEEKAIH YAEVGVIGYL EDQIMSLHTE IMELQKSPYG 551 600 ENSTTRP00000011271/1-744 RRQGDLMESL EQRAIDLYKQ LKHRPSDHSY SDSTEMVKII VHTVQSQDRV BACU012403/1-1595 RRQGDLMESL EQRAIDLYKQ LKHRPSDHSY SDSTEMVKII VHTVQSQDRV bmy_14128T0/1-738 RRQGDLMESL EQRAIDLYKQ LKHRPSDHSY SDSTEMVKII VHTVQSQDRV ENSP00000359424/1-745 RRQGDLMESL EQRAIDLYKQ LKHRPSDHSY SDSTEMVKII VHTVQSQDRV ENSBTAP00000009985/1-740 RRQGDLMESL EQRAIDLYKQ LKHRPSDHSY SDSTEMVKII VHTVQSQDRV 601 650 ENSTTRP00000011271/1-744 LKELFGHLSK LLGCKQKIID LLPKVEMALS NIKEADNTVM FMQGKRQKEI BACU012403/1-1595 LKELFGHLSK LLGCKQKIID LLPKVEMALS NIKEAENTIM FMQGKRQKEI bmy_14128T0/1-738 LKELFGHLSK LLGCKQKIID LLPKVEMALS NIKEADNTVM FMQGKRQKEI ENSP00000359424/1-745 LKELFGHLSK LLGCKQKIID LLPKVEVALS NIKEADNTVM FMQGKRQKEI ENSBTAP00000009985/1-740 LKELFGHLSK LLGCKQKIID LLPKVEMALS NIKEADSTVM FMQGKRQKEI 651 700 ENSTTRP00000011271/1-744 WHLLKIACTQ SSARSLVGSS LEG-VTPQAS AWLPTTSAER EHPLSCVVTP BACU012403/1-1595 WHLLKIACTQ SSARSLVGSS LEG-ITPQAS AWLPTTSAER EHPLSCVVTP bmy_14128T0/1-738 WHLLKIACKR ---------- ---------- LYFCISSPT- -----CVFLK ENSP00000359424/1-745 WHLLKIACTQ SSARSLVGSS LEGAVTPQTS AWLPPTSAEH DHSLSCVVTP ENSBTAP00000009985/1-740 WHLLKIACTQ SSARSLVGSS LEG-VTPQ-- --LPPTSAER EHPLSCVVTP 701 750 ENSTTRP00000011271/1-744 QDG------- ---------- ---------- ---------- ---------- BACU012403/1-1595 QDGLQGSSNA HCLQSSRRTL QHTPTFTCLL VYSVLIAWMA FIKPSLDQHS bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 QDG------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 QDG------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 GTLIGDSAQE HADQCLVSEA LSVPLPPSLL HIADFPSLPE QETSSTQWRA bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 HVPSREIARR EAARILSRPL PVSSRGASAA SVCVSAQPQW PAGGTRMNMT bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 QARVLVAGVV GLVVVLLYAS IHKIEEGHLA VYYRGGALLT SPSGPGYHIM bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 901 950 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 LPFITTFRSV QTTLQTDEVK NVPCGTSGGV MIYIDRIEVV NMLAPCAVFD bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---ETLAQII BACU012403/1-1595 IVRNYTADYD KTLIFNKIHH ELNQFCSAHT LQEVYIELFD QIDENLKQAL bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---ETLAQII ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---ETSAQMI ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---ETLAQMI 1001 1050 ENSTTRP00000011271/1-744 EENLNCLG-- ---------- ---------- ---------- ---------- BACU012403/1-1595 QKDLNVMAPG LTIQAVRVTK PKIPEAIRRN FELMEAEKTK LLIAAQKQKV bmy_14128T0/1-738 EENLNCLG-- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 EENLNCLG-- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 EENLNCLG-- ---------- ---------- ---------- ---------- 1051 1100 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 VEKEAETERK KAVIEAEKIA QVAKIRFQQK VMEKETEKRI SEIEDAAFLA bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 REKAKADAEY YAAHKYATSN KHKLTPEYLE LKRYQAIASN SKIYFGSNIP bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 SMFVDSSCAL KYSEKSHKAG RLPPGPTPLP IIGNLMQLNL KDVPASLSKL bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 1201 1250 ENSTTRP00000011271/1-744 ---------- ----HLSTIM H------EVN EKQGNSMM-- ---------- BACU012403/1-1595 AKEYGPVYTL YLGSQITVVL HGYEAVKEAL IDQGDEFLCR GRIPIIDDTQ bmy_14128T0/1-738 ---------- ----HLSTII H------EAN EKQGNSMM-- ---------- ENSP00000359424/1-745 ---------- ----HLSTII H------EAN EEQGNSMM-- ---------- ENSBTAP00000009985/1-740 ---------- ----HLSTII H------EAN EKQGNNMM-- ---------- 1251 1300 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 RGYGIFFSNG NRWKQMRRFS LMTLRNFGMG KRSLEERVQE EAQFLVEELR bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 1301 1350 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 KTEAQPLDPV FTLSCASCNV ICSVLFNERF HYNNKTLLSL LSLLNKNFNR bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 1351 1400 ENSTTRP00000011271/1-744 -NLDW----- SWLT------ ---------- ---------- ---------- BACU012403/1-1595 INSPWNQIYN LWPKLIKHLP GEHKAFSKRL NDIKYFILEK VKEHQKSLDH bmy_14128T0/1-738 --VSF----- IWIR------ ---------- ---------- ---------- ENSP00000359424/1-745 -NLDW----- SWLT------ ---------- ---------- ---------- ENSBTAP00000009985/1-740 -SLDW----- SWLT------ ---------- ---------- ---------- 1401 1450 ENSTTRP00000011271/1-744 ---------- ---------- -E-------- ---------- ---------- BACU012403/1-1595 NNPRDYIDCF LSKMEQEKQN PESEFHLENL ETSKVHEEID RVIGCNQSPC bmy_14128T0/1-738 ---------- ---------- -MSVLGMLGA KDLTFHARFV WHLGC----- ENSP00000359424/1-745 ---------- ---------- -E-------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- -E-------- ---------- ---------- 1451 1500 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 MKDKIKLPYT EAVLHEIQRY ITLLPSNMPR TVVRDTKFRQ YFIPKGATVL bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 1501 1550 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 PLLSSVLYDC KEFPNPEKFD PGHFLDKNGS VRKTEYFVPF SMGKRACVGE bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 1551 1600 ENSTTRP00000011271/1-744 ---------- ---------- ---------- ---------- ---------- BACU012403/1-1595 GLARVELFLF LTTILQNFVL KPLGEPKNIE TKPIVTGLIN IPQPYKLCFI bmy_14128T0/1-738 ---------- ---------- ---------- ---------- ---------- ENSP00000359424/1-745 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009985/1-740 ---------- ---------- ---------- ---------- ---------- 1601 1650 ENSTTRP00000011271/1-744 ---------- -- BACU012403/1-1595 PRQKKNFSLL TI bmy_14128T0/1-738 ---------- -- ENSP00000359424/1-745 ---------- -- ENSBTAP00000009985/1-740 ---------- --