KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:35 2014 Check: 00 .. Name: ENSBTAP00000009484/1-305 Len: 319 Check: 180 Weight: 1.00 Name: ENSP00000355195/1-318 Len: 319 Check: 270 Weight: 1.00 Name: ENSTTRP00000001158/1-319 Len: 319 Check: 3406 Weight: 1.00 Name: bmy_14196T0/1-319 Len: 319 Check: 2530 Weight: 1.00 Name: BACU014036/1-319 Len: 319 Check: 2645 Weight: 1.00 // 1 50 ENSBTAP00000009484/1-305 ---------- ---MDITKIF SLLQPD-DEE DTNTGEKQAL NQAVYNNDSY ENSP00000355195/1-318 MRIV-LQLAK MNLMDITKIF SLLQPDKEEE DTDTEEKQAL NQAVYDNDSY ENSTTRP00000001158/1-319 MRIVLLQLAK VNLMDITKIF SLLQPDKEEE DTDTGEKQAL NQAVYNNDSY bmy_14196T0/1-319 MRIVLLQSAK VNLMDITKIF SLLQPDKEEE DTDTGEKQAL NQAVYNNDSY BACU014036/1-319 MRIVLLQLAK VNLMDITKIF SLLQPDKEEE DTDTGEKQAL NQAVYNNDSY 51 100 ENSBTAP00000009484/1-305 TLDQLLCQER YKRFINSRSG WGVPGTPLRL AAAYGHLSCL QVLLAHGADV ENSP00000355195/1-318 TLDQLLRQER YKRFINSRSG WGVPGTPLRL AASYGHLSCL QVLLAHGADV ENSTTRP00000001158/1-319 TLDQLLRQER YKRFINSRSG WGIPGTPLRL AASYGHLSCL QVLLAHGADV bmy_14196T0/1-319 TLDQLLRQER YKRFINSRSG WGVPGTPLRL AASYGHLSCL QVLLAHGADV BACU014036/1-319 TLDQLLRQER YKRFINSRSG WGVPGTPLRL AASYGHLSCL QVLLAHGADV 101 150 ENSBTAP00000009484/1-305 DSLDVKAQTP LFTAVSHGHL DCVRVLLEAG ACPGGSIYNN CSPVLTAARD ENSP00000355195/1-318 DSLDVKAQTP LFTAVSHGHL DCVRVLLEAG ASPGGSIYNN CSPVLTAARD ENSTTRP00000001158/1-319 DSLDVKAQTP LFTAVSHGHL DCVRVLLEAG ACPGGSIYNN CSPVLTAARD bmy_14196T0/1-319 DSLDVKAQTP LFTAVSHGHL DCVRVLLEAG ACPGGSIYNN CSPVLTAARD BACU014036/1-319 DSLDVKAQTP LFTAVSHGHL DCVRVLLEAG ACPGGSIYNN CSPVLTAARD 151 200 ENSBTAP00000009484/1-305 GAVTILQELL GHGAEVNVKA KLPVWASNIT SCSGPLYLAA VYGHLDCFRL ENSP00000355195/1-318 GAVAILQELL DHGAEANVKA KLPVWASNIA SCSGPLYLAA VYGHLDCFRL ENSTTRP00000001158/1-319 GAVAILQELL GHGAEANVKA KLPVWASNIA SCSGPLYLAA VYGHLDCFRL bmy_14196T0/1-319 GAVAILQELL GHGAEANVKA KLPVWASNIA SCSGPLYLAA VYGHLDCFRL BACU014036/1-319 GAVAILQELL GHGAEANVKA KLPVWASNIA SCSGPLYLAA VYGHLDCFRL 201 250 ENSBTAP00000009484/1-305 LLLHGADPDY NCTDQRLLAR VSRPRTLLEI CLHHNCEPEY IQLLIDFGAN ENSP00000355195/1-318 LLLHGADPDY NCTDQGLLAR VPRPRTLLEI CLHHNCEPEY IQLLIDFGAN ENSTTRP00000001158/1-319 LLLHGADPDY NCTDQHLLTR VPRSRTLLEI CLHHNCEPEY IRLLIDFGAN bmy_14196T0/1-319 LLLHGADPDY NCTDQHLLTR VPRPCTLLEI CLHHNCEPEY IRLLIDFGAN BACU014036/1-319 LLLHGADPDY NCTDQHLLTR VPRPCTLLEI CLHHNCEPEY IRLLIDFGAN 251 300 ENSBTAP00000009484/1-305 IYLPSLCLDL NSQYDKGTAL LVQARATPRS LLSQARLVIR RSLCHTSQPQ ENSP00000355195/1-318 IYLPSLSLDL TSQDDKGIAL LLQARATPRS LLSQVRLVVR RALCQAGQPQ ENSTTRP00000001158/1-319 IYLPSLSLDL NSQYDKGTAL LLQARATPRS LLSQARLVIR RALRHASQPQ bmy_14196T0/1-319 IYLPSLSLDL NSQYDKGTAL LLQARATPRS LLSQARLVIR RALRHASQPQ BACU014036/1-319 IYLPSLSLDL NSQYDKGTAL LLQARATPRS LLSQARLVIR RALRHASQPQ 301 350 ENSBTAP00000009484/1-305 AIDQLDIPPM LISYLKHQL ENSP00000355195/1-318 AINQLDIPPM LISYLKHQL ENSTTRP00000001158/1-319 AIDQLDIPPV LISYLKHQL bmy_14196T0/1-319 AIDHLDIPPV LISYLKHQL BACU014036/1-319 AIDQLDIPPV LISYLKHQL