KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:29 2014 Check: 00 .. Name: ENSP00000225538/1-399 Len: 440 Check: 3023 Weight: 1.00 Name: ENSBTAP00000009437/1-372 Len: 440 Check: 8088 Weight: 1.00 Name: ENSTTRP00000005539/1-399 Len: 440 Check: 4530 Weight: 1.00 Name: bmy_00210T0/1-387 Len: 440 Check: 2869 Weight: 1.00 Name: BACU006950/1-440 Len: 440 Check: 374 Weight: 1.00 // 1 50 ENSP00000225538/1-399 MARRFQEELA AFLFEYDTPR MVLVRNKKVG VIFRLIQLVV LVYVIGWVFL ENSBTAP00000009437/1-372 MAQRIQDELA SFFFEYDTPR MVLVRNKKVG IVFRLIQLVV LVYVVGWVFV ENSTTRP00000005539/1-399 MARRLQDELA AFFFEYDTPR MVLVRNKKVG VIFRLIQLVV LVYVIGWVFV bmy_00210T0/1-387 MARRLQDELA AFFFEYDTPR MVLVRNKKVG VVFRLIQLVV LVYVIGWVFV BACU006950/1-440 MARRLQDELA AFFFEYDTPR MVLVRNKKVG VVFRLIQLVV LVYVIGWVFV 51 100 ENSP00000225538/1-399 YEKGYQTSSG LISSVSVKLK GLAVTQLPGL GPQVWDVADY VFPAQGDNSF ENSBTAP00000009437/1-372 YEKGYQTSGS LISSVSVKLK GLAVTQLPSL GPQVWDVADY VFPVQGDSSF ENSTTRP00000005539/1-399 YEKGYQTSSG LISSVSVKLK GLAVTKLPSL GPQVWDVADY VFPAQGDNSF bmy_00210T0/1-387 YEKGYQTSSG LISSVSVKLK GLAVTKLPSL GP-------- ----QGDSSF BACU006950/1-440 YEKGYQTSSG LISSVSVKLK GLAVTKLPSL GPQVWDVADY VFPAQGDSSF 101 150 ENSP00000225538/1-399 VVMTNFIVTP KQTQGYCAEH PEGGICKEDS GCTPGKAKRK AQGIRTGKCV ENSBTAP00000009437/1-372 VVMTNFIATP RQAQGHCAEN PEGGTCTNNS GCTPGKAERK AQGIRTGKCV ENSTTRP00000005539/1-399 VVMTNFIATP RQAQGHCAEN PEGGTCTDNS GCTPGKAERK AQGIRTGKCV bmy_00210T0/1-387 VVMTNFIATP RQAKGHCAEN PEGGTCTNNS GCTPGKAERK AQGIRTGKCV BACU006950/1-440 VVMTNFIATP RQAKGHCAEN PEGGTCTNNS GCTPGKAERK AQGIRTGKCV 151 200 ENSP00000225538/1-399 AFNDTVKTCE IFGWCPVEVD DDIP------ ---------- ---------- ENSBTAP00000009437/1-372 AFNDTVQTCE IFGWCPVEVD DNIPW----- ---------- ---------- ENSTTRP00000005539/1-399 AFNDIVHTCE IFGWCPVEVD DNIP------ ---------- ---------- bmy_00210T0/1-387 AFNDIVHTCE IFGWCPVEVD DNIP------ ---------- ---------- BACU006950/1-440 AFNDIVHTCE IFGWCPVEVD DNIPWPKMPQ PLLKGPESPH YSMPTPPMTQ 201 250 ENSP00000225538/1-399 ---------- -----RPALL REAENFTLFI KNSISFPRFK VNRRNLVEEV ENSBTAP00000009437/1-372 ---------- ---------- ---------- ---------- ---RNLVEEV ENSTTRP00000005539/1-399 ---------- -----CPALL REAENFTLFI KNSISFPRFK VTRRNLVEEV bmy_00210T0/1-387 ---------- -----CPALL REAENFTLFI KNSISFPRFK VTRRNLVEEV BACU006950/1-440 EDPIGSHSPI HQAQLCPALL REAENFTLFI KNSISFPRFK VTRRNLVEEV 251 300 ENSP00000225538/1-399 NAAHMKTCLF HKTLHPLCPV FQLGYVVQES GQNFSTLAEK GGVVGITIDW ENSBTAP00000009437/1-372 DARYMKTCLF HKTLHPLCPV FKLGYVVQES GQNFSTLAEK GGVVGITIDW ENSTTRP00000005539/1-399 DAAYMKTCLY HKTLHPLCPV FKLGYMVQES GQNFSTLAEK GGVVGITIDW bmy_00210T0/1-387 DAAYMKTCLY HKTLHPLCPV FKLGYVVQES GQNFSTLAEK GGVVGITIDW BACU006950/1-440 DAAYMKTCLY HKTLHPLCPV FKLGYVVQES GQNFSTLAEK GGVVGITIDW 301 350 ENSP00000225538/1-399 HCDLDWHVRH CRPIYEFHGL YEEKNLSPGF NFRFARHFVE NGTNYRHLFK ENSBTAP00000009437/1-372 HCDLDWHVRH CKPIYEFHGL YEEKKLSQGF NFRFARHFVE NGTNYRHLFK ENSTTRP00000005539/1-399 HCDLDWHVRH CKPVYEFHGL YEEKKLSQGF NFRFARHFVE NGTNYRHLFK bmy_00210T0/1-387 HCDLDWHVRH CKPVYEFHGL YEEKNLSQGF NFRFARHFVE NGTNYRHLFK BACU006950/1-440 HCDLDWHVRH CKPVYEFHGL YEEKNLSQGF NFRFARHFVE NGTNYRHLFK 351 400 ENSP00000225538/1-399 VFGIRFDILV DGKAGKFDII PTMTTIGSGI GIFGVATVLC DLLLLHILPK ENSBTAP00000009437/1-372 VFGIRFDILV DGKAGKFDII PTMTTIGSGI GIFGVATVLC DLLLLHILPK ENSTTRP00000005539/1-399 VFGIRFDILV DGKAGKFDII PTMTTIGSGI GIFGVATVLC DLLLLHILPR bmy_00210T0/1-387 VFGIRFDILV DGKAGKFDII PTMTTIGSGI GIFGVATVLC DLLLLHILPR BACU006950/1-440 VFGIRFDILV DGKAGKFDII PTMTTIGSGI GIFGVATVLC DLLLLHILPR 401 450 ENSP00000225538/1-399 RHYYKQKKFK YAEDMGPGAA ERDLAATSST LGLQENMRTS ENSBTAP00000009437/1-372 RHYYKQKKFK YAEDMGPGAG QHDPAATGST LVLQENMKTS ENSTTRP00000005539/1-399 RHYYKQKKFK YAEDMGPGPV AHDPAAPYLT LVLQDNVKTS bmy_00210T0/1-387 RHYYKQKKFK YAEDMGPGTG EHDPAAASST LGLQENMKTS BACU006950/1-440 RHYYKQKKFK YAEDMGPGTG KHDPAATSST LVLQENMKTS