KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:37:51 2014 Check: 00 .. Name: ENSBTAP00000009302/1-528 Len: 614 Check: 5552 Weight: 1.00 Name: ENSP00000320378/1-535 Len: 614 Check: 5866 Weight: 1.00 Name: ENSTTRP00000006926/1-479 Len: 614 Check: 4309 Weight: 1.00 Name: bmy_13925T0/1-312 Len: 614 Check: 7271 Weight: 1.00 Name: BACU008647/1-611 Len: 614 Check: 3392 Weight: 1.00 // 1 50 ENSBTAP00000009302/1-528 ---------- ---------- ---------- ---------- ---------- ENSP00000320378/1-535 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006926/1-479 ---------- ---------- ---------- ---------- ---------- bmy_13925T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU008647/1-611 MDSPNKCELN CIPKGESFYY KHREAVIDGT PCEPGKRDIC VDGSCRKERY 51 100 ENSBTAP00000009302/1-528 ---------- MEKGTRHRNN TEKNHPGGSE SQ---EADSG GGGVALKKEI ENSP00000320378/1-535 ---------- MEEGARHRNN TEKKHPGGGE SDASPEAGSG GGGVALKKEI ENSTTRP00000006926/1-479 ---------- MEKGARHRNN TGKNHPGGSE SEASPES-SA GGGVALKKEI bmy_13925T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU008647/1-611 LSEVEILLRN MEKGARHRNN TEKNHPGGSE PEASPETGSG GGGVALKKEI 101 150 ENSBTAP00000009302/1-528 GLVSGCAIIV GNIIGSGIFV SPKGVLENAG SVGLALIIWI VTGLITVVGA ENSP00000320378/1-535 GLVSACGIIV GNIIGSGIFV SPKGVLENAG SVGLALIVWI VTGFITVVGA ENSTTRP00000006926/1-479 GLVSACGIIV GNIIGSGIFV SPKGVLENAG SVGLALIVWI ITGLITAVGA bmy_13925T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU008647/1-611 GLVSACGIIV GNIIGSGIFV SPKGVLENAG SVGLALIVWI LTGLITAVGA 151 200 ENSBTAP00000009302/1-528 LCYAELGVTI PKSGGDYSYV KDIFGGLAGF LRLWIAVLVI YPTNQAVIAL ENSP00000320378/1-535 LCYAELGVTI PKSGGDYSYV KDIFGGLAGF LRLWIAVLVI YPTNQAVIAL ENSTTRP00000006926/1-479 LCYAELGVTI PKSGGDYSYV KDIFGGLAGF LRLWIAVLVI YPTNQAVIAL bmy_13925T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU008647/1-611 LCYAELGVTI PKSGGDYSYV KDIFGGLAGF LRLWIAVLVI YPTNQAVIAL 201 250 ENSBTAP00000009302/1-528 TFSNYVLQPL FPTCFPP--- ------ESGL RL-------- --LAALCLLL ENSP00000320378/1-535 TFSNYVLQPL FPTCFPP--- ------ESGL RL-------- --LAAICLLL ENSTTRP00000006926/1-479 TFSNYVLQPL FPTCFPP--- ------ESGL RL-------- --LAAICLLL bmy_13925T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU008647/1-611 TFSNYVLQPL XXXXXXPASY FLPPRKQSGQ HLQMTDSEPL VALSAVTIVL 251 300 ENSBTAP00000009302/1-528 LTWINCSSVR WATRVQDVFT AGKLLALGLI IIMGVVQICK GQYFWLEPKN ENSP00000320378/1-535 LTWVNCSSVR WATRVQDIFT AGKLLALALI IIMGIVQICK GEYFWLEPKN ENSTTRP00000006926/1-479 LTWVNCASVR WATRVQDVFT AGKLLALGLI IVMGVVQICK GQYFWLEPKN bmy_13925T0/1-312 ---------- ---------- ---------- --MGVVQICK GQYFWLEPKN BACU008647/1-611 LTWVNCSSVR WATRVQDVFT AGKLLALGLI IVMGVVQICK GQYFWLEPKN 301 350 ENSBTAP00000009302/1-528 AFDNFQEPNI GLIALAFLQG SFAYGGWNFL NYVTEELVDP HKNLPRAIFI ENSP00000320378/1-535 AFENFQEPDI GLVALAFLQG SFAYGGWNFL NYVTEELVDP YKNLPRAIFI ENSTTRP00000006926/1-479 AFENFQEPDI GLIALAFLQG SFAYGGWNFL NYVTEELVDP YKNLPRAIFI bmy_13925T0/1-312 AFENFQEPDI GLIALAFLQG SFAYGGWNFL NYVTEELVDP YKNLPRAIFI BACU008647/1-611 AFENFQEPDI GLIALAFLQG SFAYGGWNFL NYVTEELVDP YKNLPRAIFI 351 400 ENSBTAP00000009302/1-528 SIPLVTFVYV FANVAYVTAM SPQELLASNA VAVTFGEKLL GVMAWIMPIS ENSP00000320378/1-535 SIPLVTFVYV FANVAYVTAM SPQELLASNA VAVTFGEKLL GVMAWIMPIS ENSTTRP00000006926/1-479 SIPLVTFVYV FANVAYVTAM SPQELLASNA VAVTFGEKLL GVMAWIMPIS bmy_13925T0/1-312 SIPLVTFVYV FANVAY---- ---------- ---TFGEKLL GVMAWIMPIS BACU008647/1-611 SIPLVTFVYV FANVAYVTAM SPQELLASNA VAVTFGEKLL GVMAWIMPIS 401 450 ENSBTAP00000009302/1-528 VALSTFGGVN GSLFTSSRLF FAGAREGHLP SVLAMIHVKR CTPIPALLFT ENSP00000320378/1-535 VALSTFGGVN GSLFTSSRLF FAGAREGHLP SVLAMIHVKR CTPIPALLFT ENSTTRP00000006926/1-479 VALSTFGGVN GSLFTSSRLF FAGAREGHLP SVLAMIHVKR CTPIPALLFT bmy_13925T0/1-312 VALSTFGGVN GSLFTSSRLF FAGAREGHLP SVLAMIHVKR CTPIPALLFT BACU008647/1-611 VALSTFGGVN GSLFTSSRLF FAGAREGHLP SVLAMIHVKR CTPIPALLFT 451 500 ENSBTAP00000009302/1-528 CISTLLMLVT GDIYTLINYV GFINYLFYGV TVAGQIVLRW KKPDINRPIK ENSP00000320378/1-535 CISTLLMLVT SDMYTLINYV GFINYLFYGV TVAGQIVLRW KKPDIPRPIK ENSTTRP00000006926/1-479 CISTLLMLVT SDMYTLINYV GFINYFFYGV TIAGQIVLRW KKPDIPRPIK bmy_13925T0/1-312 CISTLLMLVT SDMYTLINYV GFINYFFYGV TIAGQIVLRW KKPDIPRPIK BACU008647/1-611 CISTLLMLVT SDMYTLINYV GFINYFFYGV TIAGQIVLRW KKPDIPRPIK 501 550 ENSBTAP00000009302/1-528 VNLLFPIIYL LFWAFLLVFS LWSEPVVCGI GLAIMVTGVP VYFLGIYWQH ENSP00000320378/1-535 INLLFPIIYL LFWAFLLVFS LWSEPVVCGI GLAIMLTGVP VYFLGVYWQH ENSTTRP00000006926/1-479 VSLLFPVVYL LFWAFLLVFS LWSEPVVCGT GLAIMLTGVP VYFLGVYWQH bmy_13925T0/1-312 VNLLFPIIYL LFWAFLLVFS LWSEPVVCGT GLAIMLTGVP VYFLGVYWQH BACU008647/1-611 VNLLFPIIYL LFWAFLLVFS LWSEPVVCGT GLAIMLTGVP VYFLGVYWQH 551 600 ENSBTAP00000009302/1-528 KPRCFNKFIE LLTLVSQKIC VVVYPKGAED LKMEDRNQDM EQ-QQPICQP ENSP00000320378/1-535 KPKCFSDFIE LLTLVSQKMC VVVYPEVERG SGTEEANEDM EEQQQPMYQP ENSTTRP00000006926/1-479 KPRCFNKFI- ---------- ---------- ---------- ---------- bmy_13925T0/1-312 KPRCFNKFIE LLTLVSQKMC MVVYPKVDED SGTEELNEDV EQRRQPIYQP BACU008647/1-611 KPRCFNKFIE LLTLVSQKMC MVVYPKVEED SGTEELNEDV EQWRQPIYQP 601 650 ENSBTAP00000009302/1-528 PASKDKDAVG ---P ENSP00000320378/1-535 TPTKDKDVAG QPQP ENSTTRP00000006926/1-479 ---------- ---- bmy_13925T0/1-312 AAPKDKAAEE ---P BACU008647/1-611 AAPKDKAAEE ---P