KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:37:48 2014  Check: 00 ..

 Name: ENSTTRP00000014452/1-173  Len:    239  Check:  9373  Weight:  1.00
 Name: ENSP00000006275/1-173     Len:    239  Check:  8213  Weight:  1.00
 Name: bmy_15588T0/1-225         Len:    239  Check:  9578  Weight:  1.00
 Name: ENSBTAP00000009288/1-159  Len:    239  Check:  6484  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000014452/1-173  ---------- ---------- ---------- ---------- ---------- 
ENSP00000006275/1-173     ---------- ---------- ---------- ---------- ---------- 
bmy_15588T0/1-225         QAGPPPSLPG SGAHHESPEK EGGASPKHQW KREWAGSRSG AGGGACPAGP 
ENSBTAP00000009288/1-159  ---------- ---------- ---------- ---------- ---------- 


                          51                                                 100
ENSTTRP00000014452/1-173  ---------- ------MADA VLFEFLHTEM VAELWAQDPD PGPGVSAGPR 
ENSP00000006275/1-173     ---------- ------MADT VLFEFLHTEM VAELWAHDPD PGPGVSAGLR 
bmy_15588T0/1-225         MRTRGAGRLL GTGGRRMADA VLFEFLHTEM VAELWAQDPD PGPG------ 
ENSBTAP00000009288/1-159  ---------- ------MADP ALFEFLHTEM VAELWAQDPD PGPG------ 


                          101                                                150
ENSTTRP00000014452/1-173  GEEARAAGXX XXXXXXXXXX XXXXXXXXXX XLPRETLAFR EELDALKFLC 
ENSP00000006275/1-173     GEEAGATKGQ KMSLSVLEGM GFRVGQALGE RLPRETLAFR EELDVLKFLC 
bmy_15588T0/1-225         --------GQ KVSLSVLEGM GFRVGQALGE RLPREMLAFR EELDVLKFLC 
ENSBTAP00000009288/1-159  --------GQ KTSLLVLEGM GFRVGQALGE RLPRETLTFR EELDILKFLC 


                          151                                                200
ENSTTRP00000014452/1-173  KDVWAAVFQK QMDSLRTNHQ GTYVLQDHSF PLLIRMASGL QYLEEAPKXX 
ENSP00000006275/1-173     KDLWVAVFQK QMDSLRTNHQ GTYVLQDNSF PLLLPMASGL QYLEEAPKFL 
bmy_15588T0/1-225         KDVWAAVFQK QMDSLRTNHQ GTYVLQDNSF PLLIRMASGL QYLEEAPKFL 
ENSBTAP00000009288/1-159  KDLWVAVFHK QMDSLRTNHQ GTYVLQDNSF PLLVRMASGL QYLEEAPKFL 


                          201                                                250
ENSTTRP00000014452/1-173  XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX KFQVVIQRS 
ENSP00000006275/1-173     AFTCGLLRGA LYTLGIESVV TASVAALPVC KFQVVIPKS 
bmy_15588T0/1-225         AFTCGLLRGT LSTLGIKSLV TASVAALPAC KFQVVIQRS 
ENSBTAP00000009288/1-159  AFTCGLLRGT LSTLGVKSLV TASVAALPAC KFQVVIQKL