KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:36:39 2014 Check: 00 .. Name: ENSTTRP00000014805/1-236 Len: 467 Check: 1514 Weight: 1.00 Name: bmy_14006T0/1-406 Len: 467 Check: 635 Weight: 1.00 Name: ENSP00000253719/1-420 Len: 467 Check: 6399 Weight: 1.00 Name: ENSBTAP00000008917/1-425 Len: 467 Check: 8454 Weight: 1.00 // 1 50 ENSTTRP00000014805/1-236 ---------- ---------- ---------- ---------- ---------- bmy_14006T0/1-406 MSPPPLLLLL L---PLLTMQ PTGATLIRIP LRRVYTGLRA LNPLRGWDKP ENSP00000253719/1-420 MSPPPLLQPL LLLLPLLNVE PSGATLIRIP LHRVQPGRRI LNLLRGWREP ENSBTAP00000008917/1-425 MSLPPLLLLL LLPPPFLTLE PARASLIRIP LRRVNIGFKA LNPLRGWEKL 51 100 ENSTTRP00000014805/1-236 ---------- ---------- ---------- ---------- ---------- bmy_14006T0/1-406 AEPPRLGAPS PGDKDFFVPL SNYMNTQYYG EIGLGTPPQN FSVVFDTGSS ENSP00000253719/1-420 AELPKLGAPS PGDKPIFVPL SNYRDVQYFG EIGLGTPPQN FTVAFDTGSS ENSBTAP00000008917/1-425 AEPPRLGAPA PGNKSLFVPL SDYMNVQYYG EIGLGTPPQN FSVVFDTGSS 101 150 ENSTTRP00000014805/1-236 ---------- ---------- ---------- ---------- ---------- bmy_14006T0/1-406 NLWVPSVRCH FFSLPCCELS WGRIRLNGGK GRRGAGPGLP KGFGGPVLFQ ENSP00000253719/1-420 NLWVPSRRCH FFSVPC---- W--------- ---------- ---------- ENSBTAP00000008917/1-425 NLWVPSVRCH FFSLPC---- W--------- ---------- ---------- 151 200 ENSTTRP00000014805/1-236 -----AHH-- ---------- ---------- ---------- ----VEGLTE bmy_14006T0/1-406 RILTGLHHRF NSKASSSFRP NGTKFAIQYG TGRLDGILSE DKLTIGGITG ENSP00000253719/1-420 -----LHHRF DPKASSSFQA NGTKFAIQYG TGRVDGILSE DKLTIGGIKG ENSBTAP00000008917/1-425 -----LHHRF NPKASSSFRS NGTKFAIQYG TGRLAGILSE DKLTIGGITG 201 250 ENSTTRP00000014805/1-236 VGQQFEESVT ETDQFFMNAE SYGILGLG-P CLA-ERVTPV LDTMAQK-LV bmy_14006T0/1-406 ASVIFGEALW EPSLVFTFAH FDGVLGLGFP VLAVGGVRPP LDRLVDEGLL ENSP00000253719/1-420 ASVIFGEALW EPSLVFAFAH FDGILGLGFP ILSVEGVRPP MDVLVEQGLL ENSBTAP00000008917/1-425 ATVTFGEALW EPSLVFTFAH FDGILGLGFP VLAVGGVRPP LDRLVDQGLL 251 300 ENSTTRP00000014805/1-236 DLPVFSVYTS SDTGGGAGSK LIFRG-DHSH LSGNID-VPV TKQVYWQIAV bmy_14006T0/1-406 DKPVFSFYLN RDPEAADGGE LVLGGSDPAH YIPPLTFVTS SSAR----KS ENSP00000253719/1-420 DKPVFSFYLN RDPEEPDGGE LVLGGSDPAH YIPPLTFVPV TVPAYWQIHM ENSBTAP00000008917/1-425 DKPVFSFYLN RNPEAADGGE LVLGGSDPAH YIPPLTFVPV TIPAFWQIHM 301 350 ENSTTRP00000014805/1-236 DTIQVGGTMM FFSEG-QAIV DPGTSLITGP SGGSRQLHTT -GAEPMD-GE bmy_14006T0/1-406 QRSPQSPSSL ---------- -AGSGLTSRP RTTSSRLL-- --------GV ENSP00000253719/1-420 ERVKVGPGLT LCAKGCAAIL DTGTSLITGP TEEIRALHAA IGGIPLLAGE ENSBTAP00000008917/1-425 ERVQVGTGLT LCARGCAAIL DTGTSLITGP TEEIRALQKA IGAVPLLMGK 351 400 ENSTTRP00000014805/1-236 YTLECVNISV LPDVTFTING VPHTHQPTAY TLLKFMDGMK FLISGFQGSD bmy_14006T0/1-406 ASVSACQASR L--------- -WTCLRPQG- --PSGSSAMS SCAATWPSST ENSP00000253719/1-420 YIILCSEIPK LPAVSFLLGG VWFNLTAHDY VIQTTRNGVR LCLSGFQALD ENSBTAP00000008917/1-425 YYIECSKIPT LPPVSFLLGG VWFNLTAQDY VIQITRSGFS VCLSGFMALD 401 450 ENSTTRP00000014805/1-236 IQP-PAWSFW TLSNVIKQFY --AFDHGN-- -N-HVGL-VP AVP------- bmy_14006T0/1-406 VATGKAGREW GLR------- --AFELVEQD SE-GVGLRSR SSP------- ENSP00000253719/1-420 VPP-PAGPFW ILGDVFLGTY VAVFDRGDMK SSARVGL-AR ARTRGADL-- ENSBTAP00000008917/1-425 VPP-PSGPFW ILGDVFLGSY VAVFDRGDRK SGAQVGL-AR ARPRGTRMWA 451 500 ENSTTRP00000014805/1-236 ---------- ------- bmy_14006T0/1-406 ---VEALVTR MRXPRYS ENSP00000253719/1-420 ---GWGETAQ AQFPG-- ENSBTAP00000008917/1-425 EEQGRGLGSQ KQFQG--