KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:36:13 2014 Check: 00 .. Name: ENSBTAP00000008782/1-386 Len: 392 Check: 2898 Weight: 1.00 Name: bmy_00587T0/1-353 Len: 392 Check: 9361 Weight: 1.00 Name: BACU015530/1-383 Len: 392 Check: 2962 Weight: 1.00 Name: ENSTTRP00000016142/1-388 Len: 392 Check: 7794 Weight: 1.00 // 1 50 ENSBTAP00000008782/1-386 MEALGKLKQF DAYPKTLEDF RVKTCGGATV SLHNKTFLKA LIFSHLRDCF bmy_00587T0/1-353 MEALGKLKQF DAYPKTLEDF RVKTCGGATV TIVSGLLMLL LFLSELQYYL BACU015530/1-383 MEALGKLKQF DAYPKTLEDF RVKTCGGATV TIVSGLLMLL LFLSELQYYL ENSTTRP00000016142/1-388 MEALGKLKQF DAYPKTLEDF RVKTCGGATV TIVSGLLMLL LFLSELQYYL 51 100 ENSBTAP00000008782/1-386 VGQLY-HLFI RKLRHPRIHI HNIYWFGQKL CSGFSVRCSE YIIFQYIPIY bmy_00587T0/1-353 TTEVHPELYV DKSRGDKLKI NINVLFPHMP CAYLSIDAMD VAGEQQLDV- BACU015530/1-383 TTEVHPELYV DKSRGDKLKI NINVLFPHMP CAYLSIDAMD VAGEQQLDV- ENSTTRP00000016142/1-388 TTEVHPELYV DKSRGDKLKI NINVLFPHMP CAYLSIDAMD VAGEQQLDV- 101 150 ENSBTAP00000008782/1-386 ILEHYIYIPY IYIETASYSE VVKGGEQLGK VEVKVFDPDS LDPDRCESCY bmy_00587T0/1-353 --EHNLFKKR LDKDGFPVSS EAERHE-LGK VEMKVFDPDS LDPNRCESCY BACU015530/1-383 --EHNLFKKR LDKDGFPVSS EAERHE-LGK VEMKVFDPDS LDPNRCESCY ENSTTRP00000016142/1-388 --EHNLFKKR LDKDGFPVSS EAERHE-LGK VEMKVFDPDS LDPNRCESCY 151 200 ENSBTAP00000008782/1-386 GAEMEDIKCC NSCEDVREAY RRRGWAFKNP DTIEQCRREG FSQKMQEQKN bmy_00587T0/1-353 GAETEDIKCC NSCEDVREAY RRRGWAFKNP DTIEQCRREG FSQKMQEQKN BACU015530/1-383 GAETEDIKCC NSCEDVREAY RRRGWAFKNP DTIEQCRREG FSQKMQEQKN ENSTTRP00000016142/1-388 GAETEDIKCC NSCEDVREAY RRRGWAFKNP DTIEQCRREG FSQKMQEQKN 201 250 ENSBTAP00000008782/1-386 EGCQVYGFLE VNKVAGNFHF APGKSFQQSH VHV-----HD LQSFGLDNIN bmy_00587T0/1-353 EGCQVYGFLE VNK------- ---------- ---------- --------IN BACU015530/1-383 EGCQVYGFLE VNKVAGNFHF APGKSFQQSH VHV-----HD LQSFGLDNIN ENSTTRP00000016142/1-388 EGCQVYGFLE VNKVAGNFHF APGKSFQQSH VHVHAVEIHD LQSFGLDNIN 251 300 ENSBTAP00000008782/1-386 MTHYIRHLSF GEDYPGIVNP LDHTNVTAPQ ASMMFQYFVK VVPTVYMKVD bmy_00587T0/1-353 MTHYIQHLSF GEDYPGIVNP LDHTNVTAPQ ASMMFQYFVK VVPTVYMKVD BACU015530/1-383 MTHYIQHLSF GEDYPGIVNP LDHTNVTAPQ ASMMFQYFVK VVPTVYMKVD ENSTTRP00000016142/1-388 MTHYIQHLSF GEDYPGIVNP LDHTNVTAPQ ASMMFQYFVK VVPTVYMKVD 301 350 ENSBTAP00000008782/1-386 GEVLRTNQFS VTRHEKVANG LMGDQGLPGV FVLYELSPMM VKLTEKHRSF bmy_00587T0/1-353 GEVLRTNQFS VTRHEKVANG LMGDQGLPGV FVLYELSPMM VKLTEKHRSF BACU015530/1-383 GEVLRTNQFS VTRHEKVANG LMGDQGLPGV FVLYELSPMM VKLTEKHRSF ENSTTRP00000016142/1-388 GEVLRTNQFS VTRHEKVANG LMGDQGLPGV FVLYELSPMM VKLTEKHRSF 351 400 ENSBTAP00000008782/1-386 THFLTGVCAI IGGMFTVAGL IDSLIYHSAR AIQKKIDLGK TT bmy_00587T0/1-353 THFLTGVCAI IGGMFTVAGL IDSLIYHSAR AIQKKIDLGK TT BACU015530/1-383 THFLTGVCAI IGGMFTVAGL IDSLIYHSAR AIQKKIDLGK TT ENSTTRP00000016142/1-388 THFLTGVCAI IGGMFTVAGL IDSLIYHSAR AIQKKIDLGK TT