KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:53 2014 Check: 00 .. Name: BACU006986/1-1263 Len: 1274 Check: 5613 Weight: 1.00 Name: ENSP00000290158/1-876 Len: 1274 Check: 176 Weight: 1.00 Name: bmy_14045T0/1-781 Len: 1274 Check: 1091 Weight: 1.00 Name: ENSTTRP00000004423/1-843 Len: 1274 Check: 7168 Weight: 1.00 Name: ENSBTAP00000008650/1-876 Len: 1274 Check: 1421 Weight: 1.00 // 1 50 BACU006986/1-1263 ---------- -MARRAGVTA TQSACSLRAA VQQEGERGRE GRVLANPGNS ENSP00000290158/1-876 MELITILEKT VSPDRLELEA AQKFLERAAV ENLPTFLVEL SRVLANPGNS bmy_14045T0/1-781 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004423/1-843 ---------- ---------- ---------- ---PTFLVEL SRVLANPGNS ENSBTAP00000008650/1-876 MELITILEKT VSPDRLELEA AQKFLERAAV ENLPTFLVEL SRVLANPGNS 51 100 BACU006986/1-1263 QVARVAAGLQ IKNSLTSKDP DIKTQYQQRW LAIDANARRE VKNYVLQTLG ENSP00000290158/1-876 QVARVAAGLQ IKNSLTSKDP DIKAQYQQRW LAIDANARRE VKNYVLQTLG bmy_14045T0/1-781 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004423/1-843 QVARVAAGLQ IKNSLTSKDP DIKTQYQQRW LAIDANARRE VKNYVLQTLG ENSBTAP00000008650/1-876 QVARVAAGLQ IKNSLTSKDP DIKAQYQQRW LAIDANARRE VKNYVLQTLG 101 150 BACU006986/1-1263 TETYRPSSAS QCVAGIACAE IPVNQWPELI PQLVANVTNP NSTEHMKEST ENSP00000290158/1-876 TETYRPSSAS QCVAGIACAE IPVNQWPELI PQLVANVTNP NSTEHMKEST bmy_14045T0/1-781 ---------- ---------- ---------- ---------- -----MKEST ENSTTRP00000004423/1-843 TETYRPSSAS QCVAGIACAE IPVNQWPELI PQLVANVTNP NSTEHMKEST ENSBTAP00000008650/1-876 TETYRPSSAS QCVAGIACAE IPVNQWPELI PQLVANVTNP NSTEHMKEST 151 200 BACU006986/1-1263 LEAIGYICQD IDPEQLQDKS NEILTAIIQG MRKEEPSNNV KLAATNALLN ENSP00000290158/1-876 LEAIGYICQD IDPEQLQDKS NEILTAIIQG MRKEEPSNNV KLAATNALLN bmy_14045T0/1-781 LEAIGYICQD IDPEQLQDKS NEILTAIIQG MRKEEPSNNV KLAATNALLN ENSTTRP00000004423/1-843 LEAIGYICQD IDPEQLQDKS NEILTAIIQG MRKEEPSNNV KLAATNALLN ENSBTAP00000008650/1-876 LEAIGYICQD IDPEQLQDKS NEILTAIIQG MRKEEPSNNV KLAATNALLN 201 250 BACU006986/1-1263 SLEFTKANFD KESERHFIMQ VVCEATQCPD TRVRVAALQN LVKIMSLYYQ ENSP00000290158/1-876 SLEFTKANFD KESERHFIMQ VVCEATQCPD TRVRVAALQN LVKIMSLYYQ bmy_14045T0/1-781 SLEFTKANFD KESERHFIMQ VVCEATQCPD TRVRVAALQN LVKIMSLYYQ ENSTTRP00000004423/1-843 SLEFTKANFD KESERHFIMQ VVCEATQCPD TRVRVAALQN LVKIMSLYYQ ENSBTAP00000008650/1-876 SLEFTKANFD KESERHFIMQ VVCEATQCPD TRVRVAALQN LVKIMSLYYQ 251 300 BACU006986/1-1263 YMETYMGPAL FAITIEAMKS DIDEVALQGI EFWSNVCDEE MDLAIEASEA ENSP00000290158/1-876 YMETYMGPAL FAITIEAMKS DIDEVALQGI EFWSNVCDEE MDLAIEASEA bmy_14045T0/1-781 YMETYMGPAL FAITIEAMKS DIDEVALQGI EFWSNVCDEE MDLAIEASEA ENSTTRP00000004423/1-843 YMETYMGPAL FAITIEAMKS DIDEVALQGI EFWSNVCDEE MDLAIEASEA ENSBTAP00000008650/1-876 YMETYMGPAL FAITIEAMKS DIDEVALQGI EFWSNVCDEE MDLAIEASEA 301 350 BACU006986/1-1263 AEQGRPPEHT SKFYAKGALQ YLVPILTQTL TKQDENDDDD DWNPCKAAGV ENSP00000290158/1-876 AEQGRPPEHT SKFYAKGALQ YLVPILTQTL TKQDENDDDD DWNPCKAAGV bmy_14045T0/1-781 AEQGRPPEHT SKFYAKGALQ YLVPILTQTL TKQDENDDDD DWNPCKAAGV ENSTTRP00000004423/1-843 AEQGRPPEHT SKFYAKGALQ YLVPILTQTL TKQDENDDDD DWNPCKAAGV ENSBTAP00000008650/1-876 AEQGRPPEHT SKFYAKGALQ YLVPILTQTL TKQDENDDDD DWNPCKAAGV 351 400 BACU006986/1-1263 CLMLLATCCE DDIVPHVLPF IKEHIKNPDW RYRDAAVMAF GCILEGPEPN ENSP00000290158/1-876 CLMLLATCCE DDIVPHVLPF IKEHIKNPDW RYRDAAVMAF GCILEGPEPS bmy_14045T0/1-781 CLMLLATCCE DDIVPHVLPF IKEHIKNPDW RYRDAAVMAF GCILEGPEPN ENSTTRP00000004423/1-843 CLMLLATCCE DDIVPHVLPF IKEHIKNPDW RYRDAAVMAF GCILEGPEPN ENSBTAP00000008650/1-876 CLMLLATCCE DDIVPHVLPF IKEHIKNPDW RYRDAAVMAF GCILEGPEPN 401 450 BACU006986/1-1263 QLKPLVIQAM PTLIELMKDP SVVVRDTTAW TVGRICELLP EAAINDVYLT ENSP00000290158/1-876 QLKPLVIQAM PTLIELMKDP SVVVRDTAAW TVGRICELLP EAAINDVYLA bmy_14045T0/1-781 QLKPLVIQAM PTLIELMKDP SVVVRDTTAW TVGRICELLP EAAINDVYLT ENSTTRP00000004423/1-843 QLKPLVIQAM PTLIELMKDP SVVVRDTTAW TVGRICELLP EAAINDVYLT ENSBTAP00000008650/1-876 QLKPLVIQAM PTLIELMKDP SVVVRDTTAW TVGRICELLP EAAINDVYLT 451 500 BACU006986/1-1263 PLLQCLIEGL SAEPRVASNV CWAFSSLAEA AYEAADVADD QEEPATYCLS ENSP00000290158/1-876 PLLQCLIEGL SAEPRVASNV CWAFSSLAEA AYEAADVADD QEEPATYCLS bmy_14045T0/1-781 PLLQCLIEGL SAEPRVASNV CWAFSSLAEA AYEAADVADD QEEPATYCLS ENSTTRP00000004423/1-843 PLLQCLIEGL SAEPRVASNV CWAFSSLAEA AYEAADVADD QEEPATYCLS ENSBTAP00000008650/1-876 PLLQCLIEGL SAEPRVASNV CWAFSSLAEA AYEAADVADD QEEPATYCLS 501 550 BACU006986/1-1263 SSFELIVQKL LETTDRPDGH QNNLRSSAYE SLMEIVKNSA KDCYPAVQKT ENSP00000290158/1-876 SSFELIVQKL LETTDRPDGH QNNLRSSAYE SLMEIVKNSA KDCYPAVQKT bmy_14045T0/1-781 SSFELIVQKL LETTDRPDGH QNNLRSSAYE SLMEIVKNSA KDCYPAVQKT ENSTTRP00000004423/1-843 SSFELIVQKL LETTDRPDGH QNNLRSSAYE SLMEIVKNSA KDCYPAVQKT ENSBTAP00000008650/1-876 SSFELIVQKL LETTDRPDGH QNNLRSSAYE SLMEIVKNSA KDCYPAVQKT 551 600 BACU006986/1-1263 TLVIMERLQQ VLQMESHIQS TSDRIQFNDL QSLLCATLQN VLRKVQHQDA ENSP00000290158/1-876 TLVIMERLQQ VLQMESHIQS TSDRIQFNDL QSLLCATLQN VLRKVQHQDA bmy_14045T0/1-781 TLVIMERLQQ VLQMESHIQS TSDRIQFNDL QSLLCATLQN VLRKVQHQDA ENSTTRP00000004423/1-843 TLVIMERLQQ VLQMESHIQS TSDRIQFNDL QSLLCATLQN VLRKVQHQDA ENSBTAP00000008650/1-876 TLVIMERLQQ VLQMESHIQS TSDRIQFNDL QSLLCATLQN VLRKVQHQDA 601 650 BACU006986/1-1263 LQISDVVMAS LLRMFQSTAG SGGVQEDALM AVSTLVEVLG GEFLKYMEAF ENSP00000290158/1-876 LQISDVVMAS LLRMFQSTAG SGGVQEDALM AVSTLVEVLG GEFLKYMEAF bmy_14045T0/1-781 LQISDVVMAS LLRMFQSTAG SGGVQEDALM AVSTLVEVLG GEFLKYMEAF ENSTTRP00000004423/1-843 LQISDVVMAS LLRMFQSTAG SGGVQEDALM AVSTLVEVLG GEFLKYMEAF ENSBTAP00000008650/1-876 LQISDVVMAS LLRMFQSTAG SGGVQEDALM AVSTLVEVLG GEFLKYMEAF 651 700 BACU006986/1-1263 KPFLGIGLKN YAEYQVCLAA VGLVGDLCRA LQSNILPFCD EVMQLLLENL ENSP00000290158/1-876 KPFLGIGLKN YAEYQVCLAA VGLVGDLCRA LQSNIIPFCD EVMQLLLENL bmy_14045T0/1-781 KPFLGIGLKN YAEYQVCLAA VGLVGDLCRA LQSNILPFCD EVMQLLLENL ENSTTRP00000004423/1-843 KPFLGIGLKN YAEYQVCLAA VGLVGDLCRA LQSNILPFCD EVMQLLLENL ENSBTAP00000008650/1-876 KPFLGIGLKN YAEYQVCLAA VGLVGDLCRA LQSNILPFCD EVMQLLLENL 701 750 BACU006986/1-1263 GNENVHRSVK PQILSVFGDI ALAIGGEFKK YLEVVLNTLQ QASQAQVDKS ENSP00000290158/1-876 GNENVHRSVK PQILSVFGDI ALAIGGEFKK YLEVVLNTLQ QASQAQVDKS bmy_14045T0/1-781 GNENVHRSVK PQILSVFGDI ALAIGGEFKK YLEVVLNTLQ QASQAQVDKS ENSTTRP00000004423/1-843 GNENVHRSVK PQILSVFGDI ALAIGGEFKK YLEVVLNTLQ QASQAQVDKS ENSBTAP00000008650/1-876 GNENVHRSVK PQILSVFGDI ALAIGGEFKK YLEVVLNTLQ QASQAQVDKS 751 800 BACU006986/1-1263 DYDMVDYLNE LREGCLEAYT GIVQGLKGDQ ENVHPDVMLV QPRVEFILSF ENSP00000290158/1-876 DYDMVDYLNE LRESCLEAYT GIVQGLKGDQ ENVHPDVMLV QPRVEFILSF bmy_14045T0/1-781 DYDMVDYLNE LREGCLEAYT GIVQGLKGDQ ENVHPDVMLV QPRVEFILSF ENSTTRP00000004423/1-843 DYDMVDYLNE LREGCLEAYT GIVQGLKGDQ ENVHPDVMLV QPRVEFILSF ENSBTAP00000008650/1-876 DYDMVDYLNE LREGCLEAYT GIVQGLKGDQ ENVHPDVMLV QPRVEFILSF 801 850 BACU006986/1-1263 IDHIAGDEDH TDGVVACAAG LIGHTGRASE FSVSPLHLRR ALSQSPLPLC ENSP00000290158/1-876 IDHIAGDEDH TDGVVACAAG LI-------- ---------- ---------- bmy_14045T0/1-781 IDHIAGDEDH TDGVVACAAG LI-------- ---------- ---------- ENSTTRP00000004423/1-843 IDHIAGDEDH TDGVVACAAG LI-------- ---------- ---------- ENSBTAP00000008650/1-876 IDHIAGDEDH TDGVVACAAG LI-------- ---------- ---------- 851 900 BACU006986/1-1263 VPSDTQPMTS CGSQVRGGPG RAVAQALAME SMFEDDISIL TQEALGPSEV ENSP00000290158/1-876 ---------- ---------- ---------- ---------- ---------- bmy_14045T0/1-781 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004423/1-843 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008650/1-876 ---------- ---------- ---------- ---------- ---------- 901 950 BACU006986/1-1263 WLDAPGDPSL GGDMCSASHF ALITAYGDIK ERLGGLEREN ATLRRRLKVY ENSP00000290158/1-876 ---------- -GDLC----- ---TAFG--- ---------- ---KDVLKLV bmy_14045T0/1-781 ---------- -GDLC----- ---TAFG--- ---------- ---KDVLKLV ENSTTRP00000004423/1-843 ---------- -GDLC----- ---TAFG--- ---------- ---KDVLKLV ENSBTAP00000008650/1-876 ---------- -GDLC----- ---TAFG--- ---------- ---KDVLKLV 951 1000 BACU006986/1-1263 EIKYPLINDF GEEHGFSLYE IKDGSLLEVE KVSLQQRLNQ FQHELQKNKE ENSP00000290158/1-876 EAR-PMIHEL ---------- ---------- ---------- ---------- bmy_14045T0/1-781 EAR-PMIHEL ---------- ---------- ---------- ---------- ENSTTRP00000004423/1-843 EAR-PMIHEL ---------- ---------- ---------- ---------- ENSBTAP00000008650/1-876 EAR-PMIHEL ---------- ---------- ---------- ---------- 1001 1050 BACU006986/1-1263 QEEQLGEMIQ AYEKLCVEKS DLETELGEMR ALVETHLRQI CGLEQQLRQQ ENSP00000290158/1-876 ---------- ---------- ---------- ---------- ---------- bmy_14045T0/1-781 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004423/1-843 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008650/1-876 ---------- ---------- ---------- ---------- ---------- 1051 1100 BACU006986/1-1263 QGLRDAAFPS LSPPTAPALP CADLDLHYLA LRGGSGLSHG WPGPTPSMSE ENSP00000290158/1-876 ---------- ---------- ---------- ------LTEG ---------- bmy_14045T0/1-781 ---------- ---------- ---------- ------LTEG ---------- ENSTTRP00000004423/1-843 ---------- ---------- ---------- ------LTEG ---------- ENSBTAP00000008650/1-876 ---------- ---------- ---------- ------LTEG ---------- 1101 1150 BACU006986/1-1263 LERRQLEEAL EAAQGEARGA QLREEQLQAE CERLQGELKQ LQETRAQDLA ENSP00000290158/1-876 ---------- ---------- ---------- --------RR SKTNKAKTLA bmy_14045T0/1-781 ---------- ---------- ---------- --------RR SKTNKAKTLA ENSTTRP00000004423/1-843 ---------- ---------- ---------- --------RR SKTNKAKTLA ENSBTAP00000008650/1-876 ---------- ---------- ---------- --------RR SKTNKAKTLA 1151 1200 BACU006986/1-1263 SNQSERDMAW VKRVGDDQVN LALAYTELTE ELGRLRELSS LQGRILRTLL ENSP00000290158/1-876 T--------W ATK------- ---------- ---ELRKLKN QA-------- bmy_14045T0/1-781 T--------W ATK------- ---------- ---ELRKLKN QACTDLSKIG ENSTTRP00000004423/1-843 T--------W ATK------- ---------- ---ELRKLKN QA-------- ENSBTAP00000008650/1-876 T--------W ATK------- ---------- ---ELRKLKN QA-------- 1201 1250 BACU006986/1-1263 QEQARSGGKS RLGCGDHDGG LWTINDSLLS PQLLMETVGS DIRSCPLCQL ENSP00000290158/1-876 ---------- ---------- ---------- ---------- ---------- bmy_14045T0/1-781 YFEFYLFSFP PFICYHWDDN L---RPPLEI SNLLRNPEVR SVHGC----- ENSTTRP00000004423/1-843 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008650/1-876 ---------- ---------- ---------- ---------- ---------- 1251 1300 BACU006986/1-1263 GFPVGYPDDA LIKHIDSHLE NSKI ENSP00000290158/1-876 ---------- ---------- ---- bmy_14045T0/1-781 ---------- ---------- ---- ENSTTRP00000004423/1-843 ---------- ---------- ---- ENSBTAP00000008650/1-876 ---------- ---------- ----