KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:25 2014 Check: 00 .. Name: ENSP00000300692/1-171 Len: 172 Check: 684 Weight: 1.00 Name: ENSBTAP00000008462/1-168 Len: 172 Check: 6001 Weight: 1.00 Name: ENSTTRP00000004007/1-171 Len: 172 Check: 8841 Weight: 1.00 Name: bmy_03274T0/1-171 Len: 172 Check: 9612 Weight: 1.00 Name: BACU017317/1-114 Len: 172 Check: 3316 Weight: 1.00 // 1 50 ENSP00000300692/1-171 MEHSTFLSGL VLATLLSQVS PFKIPIEELE DRVFVNCNTS ITWVEGTVGT ENSBTAP00000008462/1-168 MEHSRFLSCL ILAALLSQVN PRILKVLEPE DKVMLECNSS ITLLQGTEGQ ENSTTRP00000004007/1-171 MEHRSFLSGL ILAALLSQVS PFDISVEELE DRVFLRCNES ITWLEGTVGK bmy_03274T0/1-171 MEHRSFLSGL ILAALLSQVS PLNISVEELE DRVFLRCSTS ITWLEGTVGQ BACU017317/1-114 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000300692/1-171 -LLSDITRLD LGKRILDPRG IYRCNGTDIY KDKESTVQVH YRMCQSCVEL ENSBTAP00000008462/1-168 EVSGNNKTRD LGKRIQDPRG MYRC----GE NTQQLILQVY YRMCQNCVEL ENSTTRP00000004007/1-171 -LAVDNKTMD LGKRSLDPRG LYVCNKADGQ TSKTPTLQVY YRMCQNCVEL bmy_03274T0/1-171 -LALGNKTMD LGKRNLDPRG VYLCNETDGK TSKTSTLQVY YRMCQNCVEL BACU017317/1-114 --------MD LGKRNLDPRG VYVCNGTDGK TSKTSTLQVY YRMCQNCVEL 101 150 ENSP00000300692/1-171 DPATVAGIIV TDVIATLLLA LGVFCFAGHE TGRLSGAADT QALLRNDQVY ENSBTAP00000008462/1-168 DTATLAGMII TDIIATVLLA LGVYCFAGHE TGRFSRAADT QALMGNDQLY ENSTTRP00000004007/1-171 DSATLAGIVI TDIIATVLLA LGIYCFAGHE TGRLSRVADT QVLLGNDQLY bmy_03274T0/1-171 DSATLAGIVI TDIIATVLLA LGVYCFAGHE TGRLSRAADT QALLGNDQLY BACU017317/1-114 DSATLAGIVI TDIIATVLLA LGVYCFAGHE TGRLSRAADT QALLGNDQLY 151 200 ENSP00000300692/1-171 QPLRDRDDAQ YSHLGGNWAR NK ENSBTAP00000008462/1-168 QPLRERNDAQ YSRLGDKWAR NK ENSTTRP00000004007/1-171 QPLRDRNDAQ YSHLGENWAR NK bmy_03274T0/1-171 QPLRDRNDAQ YSRLGENWAR NK BACU017317/1-114 QPLRDRNDAQ YSRLGENWAR NK