KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:35:24 2014 Check: 00 .. Name: ENSP00000377372/1-274 Len: 280 Check: 5924 Weight: 1.00 Name: ENSBTAP00000008460/1-242 Len: 280 Check: 6599 Weight: 1.00 Name: bmy_03451T0/1-265 Len: 280 Check: 7673 Weight: 1.00 Name: ENSTTRP00000002720/1-268 Len: 280 Check: 3915 Weight: 1.00 Name: BACU009317/1-243 Len: 280 Check: 7583 Weight: 1.00 // 1 50 ENSP00000377372/1-274 MTKSCSELCH PALHFLPCLG GLRKNLQRAV RPSPYSLGFL TFWISRVEKN ENSBTAP00000008460/1-242 ---------- ---------- -MLCCMRRTK Q--------- ------VEKN bmy_03451T0/1-265 -------MKE KAILFFIALE SYSGEIRNND HFLNSNFEGL ------VEKN ENSTTRP00000002720/1-268 VTKSCSGFSQ PALHFSPCLG AWRKCLQRVD QPCLPR---- ------VEKN BACU009317/1-243 ---------- ---------- -MLCCMRRTK Q--------- ------VEKN 51 100 ENSP00000377372/1-274 DDDQKIEQDG IKPEDKAHKA ATKIQASFRG HITRKKLKGE KKDDVQAAEA ENSBTAP00000008460/1-242 DEDQKIEQDG IKPEDKAHKA ATKIQASFRG HITRKKLKGE KKGDAPAAEA bmy_03451T0/1-265 DEDQKIEQDG IKPEDKAHKA ATKIQASFRG HITRKKLKGE KKGDAPAAEA ENSTTRP00000002720/1-268 DEDQKIEQDG IKPEDKAHKA ATKIQASFRG HITRKKLKGE KKGDAPAAEA BACU009317/1-243 DEDQKIEQDG IKPEDKAHKA ATKIQASFRG HITRKKLKGE KKGDAPAAEA 101 150 ENSP00000377372/1-274 EANKKDEAPV ADGVEKK-GE GTTTAEAAPA TGSKPDE-PG KAGETPSEEK ENSBTAP00000008460/1-242 EANEKDEAAV AEGTEKKEGE GSTPAEAAPG AGPKPEEKTG KAGETPSEEK bmy_03451T0/1-265 EANEKDEAPV TDGAQKKEGE GSTPAEAAPA AGPKPEE-TG KAGETPSEEK ENSTTRP00000002720/1-268 EANEKDEAPV AEGAEKKEGE GSTPAEAAPA AGPKPEE-TG KAGETPSEEK BACU009317/1-243 EANEKDEAPV TDGAEKKEGE GSTPAEAAPA AGPKPEE-PG KAGETPSEEK 151 200 ENSP00000377372/1-274 KGEG--DAAT EQAAPQAPAS SEEKAGSAET ESATKASTDN SPSSKAEDAP ENSBTAP00000008460/1-242 KGEGAPDAAT EQAAPQAPAP SEEKAGSAET ESATKASTDN SPSSKAEDAP bmy_03451T0/1-265 KGEGAPEAAT EQAAPQAPAP SEEKAGSAET ESATKASTDN SPSSKAEDAP ENSTTRP00000002720/1-268 KGEGAPEAAT EQAAPQAPAP SEEKAGSAET ESATKASTDN SPSSKAEDAP BACU009317/1-243 KGEGAPEAAT EQAAPQAPAP SEEKAGSAET ESATKASTDN SPSSKAEDAP 201 250 ENSP00000377372/1-274 AKEEPKQADV PAAVT--AAA ATTPAAEDAA AKATAQPPTE TGESSQAEEN ENSBTAP00000008460/1-242 AKEEPKQADV PAAVT--AAA ATAPAAEDAA AMATAQPPTE TAESSQAEEK bmy_03451T0/1-265 AKEEPKQADV PAAVT-AAAA ATTPAAEDAA AKATAQPPSE TAESSQAEEK ENSTTRP00000002720/1-268 AKEEPKQADV PAAVT-AAAA ATTPAAEDAA AKATAQPPSE TAESSQAEEK BACU009317/1-243 AKEEPKQADV PAAVTAAAAA ATTPAAEDAA AKATAQPPSE TAESSQAEEK 251 300 ENSP00000377372/1-274 IEAVDETKPK ESARQDEGKE EEPEADQEHA ENSBTAP00000008460/1-242 IEAVDETKPK DSARQDEGKG EEREADQEHA bmy_03451T0/1-265 IEAVDETKPK ESARQDEGKG EEREADQEHA ENSTTRP00000002720/1-268 IEAVDETKPK ESARQDEGKG EEREADQEHA BACU009317/1-243 IEAVDETKPK ESARQDEGKG EEREADQEHA