KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:35:00 2014 Check: 00 .. Name: ENSP00000354553/1-406 Len: 406 Check: 8179 Weight: 1.00 Name: ENSBTAP00000008351/1-404 Len: 406 Check: 6572 Weight: 1.00 Name: bmy_03412T0/1-392 Len: 406 Check: 7907 Weight: 1.00 Name: ENSTTRP00000001322/1-395 Len: 406 Check: 1843 Weight: 1.00 // 1 50 ENSP00000354553/1-406 MRGSVECTWG WGHCAPSPLL LWTLLLFAAP FGLLGEKTRQ VSLEVIPNWL ENSBTAP00000008351/1-404 MSGYEKPSRG WGFCALSPVL L--SLLMAAP LGLLGEETRQ VSLKVISNRL bmy_03412T0/1-392 MRS------- -------PVL LLSLLLTAAP FGLLGEETRQ VSLKVISDWL ENSTTRP00000001322/1-395 VRSYED---- -------RVL LLSLLLTAAP FGLLGEETRQ VSLKVISDWL 51 100 ENSP00000354553/1-406 GPLQNLLHIR AVGTNSTLHY VWSSLGPLAV VMVATNTPHS TLSVNWSLLL ENSBTAP00000008351/1-404 DFSQNLLHIR AVGTNSTLHY VWSSLGPPAV LLVATNTPNS TLSVNWSLLL bmy_03412T0/1-392 DPSQNLLHIQ AVGATSTLHY VWSSLGPPAV LLVATNTPNS TLRVNWTLLI ENSTTRP00000001322/1-395 DTSQNLLHIW AVGATSTLHY VWSSLGPPAV LLVATNTPNS TLSVNWSLLI 101 150 ENSP00000354553/1-406 SPEPDGGLMV LPKDSIQFSS ALVFTRLLEF DSTNVSDTAA KPLGRPYPPY ENSBTAP00000008351/1-404 SSDPDGGLMV LPEESIQFSS ALVFTRLFEF DSTNMSDAAS RPLGKSYPPY bmy_03412T0/1-392 SSEPDGGLMV LPKESIQFSS ALVFTRLFEF XSTNTSDAAA KPPGKSYPPY ENSTTRP00000001322/1-395 SSEPDGGLVV LPKESIQFSS AIVFTRLFEF DSTDTADAAA KPPGKSYPPY 151 200 ENSP00000354553/1-406 SLADFSWNNI TDSLDPATLS ATFQGHPMND PTRTFANGSL AFRVQAFSRS ENSBTAP00000008351/1-404 SLANFSWNNI TDSLDPATLS ATFRGHPIRD PTGAFTNGSL AFRVQAFSTS bmy_03412T0/1-392 SLADFSWDNI TDSLDPATLS ATFRGHPIHD PTGAFANGSL AFRVQAFSRS ENSTTRP00000001322/1-395 SLANFSWANI TDSLDPATLS ATFRGHPIHD PTGAFASGSL AFRVQAFSGS 201 250 ENSP00000354553/1-406 SRPAQPPRLL HTADTCQLEV ALIGASPRGN RSLFGLEVAT LGQGPDCPSM ENSBTAP00000008351/1-404 GRPAQPPRLL HSADTCQLEV ALVGASPRGN RSLFGLEVAT LGQGPGCPSM bmy_03412T0/1-392 GRPAQPPCLL HTADTCQLEV DLVGASPRGN HSLFGLEVAT LGHGPDCPSV ENSTTRP00000001322/1-395 GRPAQPPRLL HTADTCQLEV DLVGASPRGN HSLFGLEVAT LGHGPDCPSV 251 300 ENSP00000354553/1-406 QEQHSIDDEY APAVFQLDQL LWGSLPSGFA QWRPVAYSQK PGGRESALPC ENSBTAP00000008351/1-404 QEQHSIDDEY TPAVFQLDQL LWGSLPSGFM QWRPVAFSQK RGSRDSAMPC bmy_03412T0/1-392 QEQHSIDDEY APAVFQLDQL LWGSLPSGFM QWRPVAFSQK QGGRESAMPC ENSTTRP00000001322/1-395 QEQHSIDDEY APAVFQLDQL LWGSLPSGFM QWRPVAFSQK QGGRESAMPC 301 350 ENSP00000354553/1-406 QASPLHPALA YSLPQSPIVR AFFGSQNNFC AFNLTFGAST GPGYWDQHYL ENSBTAP00000008351/1-404 QSSPLHPTLA YLLPQSPIVR AFFKTQDHSC AFNLTFGAST GPGYWDQHYL bmy_03412T0/1-392 QASPLYPTLA YLLPQSPIVR AFFGSQNNFC AFNLTFGAST GPGYWDQHYL ENSTTRP00000001322/1-395 QASPLYPTLA YLLPQSPIVR AFFGSQNNFC AFNLTFGTST GPGYWDKHYL 351 400 ENSP00000354553/1-406 SWSMLLGVGF PPVDGLSPLV LGIMAVALGA PGLMLLGGGL VLLLHHKKYS ENSBTAP00000008351/1-404 SWSVLLGVGT PPVDALSPLV LGIMAVALGA PALMLLAGGL FLLLGRKRDS bmy_03412T0/1-392 SWSMLLGVGT PPVDALSSLV LGIVAVALGA PALMLLAGGV FLLLGHKWYS ENSTTRP00000001322/1-395 SWSMLLGVGT PPVDALSSLV LGIMAVALGA PALVLLAGGV FLLLGHKRYS 401 450 ENSP00000354553/1-406 EYQSIN ENSBTAP00000008351/1-404 EYQSIN bmy_03412T0/1-392 EYQPIN ENSTTRP00000001322/1-395 EYQPIN