KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:56 2014 Check: 00 .. Name: ENSP00000342518/1-521 Len: 530 Check: 9942 Weight: 1.00 Name: ENSBTAP00000008321/1-517 Len: 530 Check: 196 Weight: 1.00 Name: ENSTTRP00000013942/1-450 Len: 530 Check: 6888 Weight: 1.00 Name: bmy_13539T0/1-483 Len: 530 Check: 3738 Weight: 1.00 Name: BACU015376/1-362 Len: 530 Check: 5772 Weight: 1.00 // 1 50 ENSP00000342518/1-521 MDELLLDLFH KLTSGRQLAA GNGLCGISHK EQEVWKPGHN ILVKMRKEDK ENSBTAP00000008321/1-517 VAQLFSGLFR ESPSGRQLAE GN-----EHK DHEVLKPGHN TAVKMRKQKK ENSTTRP00000013942/1-450 ---------- ---------- ---------- ---------- ---------- bmy_13539T0/1-483 ---------- --MSSRRLGV GK-------- ---------- ---------- BACU015376/1-362 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000342518/1-521 SLVWLIHSTL ARYTQV-TNF LGTSRSSVTR CKPGANCPSS HSGISRQLSP ENSBTAP00000008321/1-517 SLIWLINSTL ASYTTDWHNI LNTSRSSVTR CKPGANCPSS HSSISRQLSP ENSTTRP00000013942/1-450 ---------- ---------- --TSRSSVTR CKPGANCPSS HSSISRQLSP bmy_13539T0/1-483 -------IRG NSQTGMNSFF PGTSRSSVTR CKPGANCPSS HSSISRQLSP BACU015376/1-362 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000342518/1-521 LSVTEDSSAP ILELQNQGSS GVCGHRVERQ NRSADDGTQT HSENSSQENR ENSBTAP00000008321/1-517 LSVTEDSSAP ILELQSRGSS GVCGHRAERQ NKSGDDGTQT HPENSSQENR ENSTTRP00000013942/1-450 LSVTEESSAP ILELQSRGSS GVCGHRAERP NRSGDDGTQT HPEDSSQGNR bmy_13539T0/1-483 LSVTEDSSAP ILELQSRGSS GVCGHRAERQ NRSGDDGTQT HPENSSQENR BACU015376/1-362 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000342518/1-521 IKARCLSCTS MVLKGIWGLL IILSVSSSWV GTTQIVKITY KNFYCPFFMT ENSBTAP00000008321/1-517 IKARCLSCMS MVLKAAWGLL IILSVSSSWV GTTQIVKITY KNFYCPFFMT ENSTTRP00000013942/1-450 IKARCLSCTS MVLKAIWGLL IILSVSSSWV GTTQIVKITY KNFYCPFFMT bmy_13539T0/1-483 IKARCLSCAS MVLKAIWGLL IILSVSSSWV GTTQIVKITY KNFYCPFFMT BACU015376/1-362 ---------- MVLKAIWGLL IILSVSSSWV GTTQIVKITY KNFYCPFFMT 201 250 ENSP00000342518/1-521 WFSTNWNIMF FPVYYSGHLA TAQEKQSPMK KFRECSRIFG EDGLTLKLFL ENSBTAP00000008321/1-517 WFSTNWNIMF FPVYYSGHLA TAQEKQSPMK KFRECSRIFG EDGLTLKLFL ENSTTRP00000013942/1-450 WFSTNWNIMF FPVYYSGHLA TAQEKQSPMK KFRECSRIFG EDGLTLKLFL bmy_13539T0/1-483 WFSTNWNIMF FPVYYSGHLA TAQEKQSPMK KFRECSRIFG EDGLTLKLFL BACU015376/1-362 WFSTNWNIMF FPVYYSGHLA TAQEKQSPMK KFRECSRIFG EDGLTLKLFL 251 300 ENSP00000342518/1-521 KRTAPFSILW TLTNYLYLLA LKKLTATDVS ALFCCNKAFV FLLSWIVLKD ENSBTAP00000008321/1-517 KRTAPFSILW TLTNYLYLLA LKKLTATDVS ALFCCNKAFV FLLSWIVLKD ENSTTRP00000013942/1-450 KRTAPFSILW TLTNYLYLLA LKKLTATDVS ALFCCNKAFV FLLSWIVLKD bmy_13539T0/1-483 KRTAPFSILW TLTNYLYLLA LKKLTATDVS ALFCCNKAFV FLLSWIVLKD BACU015376/1-362 KRTAPFSILW TLTNYLYLLA LKKLTATDVS ALFCCNKAFV FLLSWIVLKD 301 350 ENSP00000342518/1-521 RFMGVR---- ----IVAAIM AITGIVMMAY ADNFHADSII GVAFAVGSAS ENSBTAP00000008321/1-517 RFMGVR---- ----IVAAIM AITGIVMMAY ADNFHADSII GVAFAVGSAS ENSTTRP00000013942/1-450 RFMGVR---- ----IVAAIM AITGIVMMAY ADNFHADSII GVAFAVGSAS bmy_13539T0/1-483 RFMGVRVMAH LIQCIVAAIM AITGIVMMAY ADNFHADSII GVAFAVGSAS BACU015376/1-362 RFMGVR---- ----IVAAIM AITGIVMMAY ADNFHADSII GVAFAVGSAS 351 400 ENSP00000342518/1-521 TSALYKVLFK MFLGSANFGE AAHFVSTLGF FNLIFISFTP VILYFTKVEH ENSBTAP00000008321/1-517 TSALYKVLFK MFLGSANFGE AAHFVSTLGF FNLIFISFTP IILYFTKVEH ENSTTRP00000013942/1-450 TSALYKVLFK MFLGSANFGE AAHFVSTLGF FNLIFISFTP VILYLTKVEH bmy_13539T0/1-483 TSALYKVLFK MFLGSANFGE AAHFVSTLGF FNLIFISFTP VILYFTKVEH BACU015376/1-362 TSALYKVLFK MFLGSANFGE AAHFVSTLGF FNLIFISFTP VILYFTKVEH 401 450 ENSP00000342518/1-521 WSSFAALPWG CLCGMAGLWL AFNILVNVGV VLTYPILISI GTVLSVPGNA ENSBTAP00000008321/1-517 WSSFAALPWG CLCGMAGLWL AFNILVNVGV VLTYPILISI GTVLSVPGNA ENSTTRP00000013942/1-450 WSSFAALPWG CLCGMAGLWL AFNILVNVGV VLTYPILISI GTVLSVPGNA bmy_13539T0/1-483 WSSFAALPWG CLCGMAGLWL AFNILVNVGV VLTYPILISI GTVLSVPGNA BACU015376/1-362 WSSFAALPWG CLCGMAGLWL AFNILVNVGV VLTYPILISI GTVLSVPGNA 451 500 ENSP00000342518/1-521 AVDLLKQEVI FNVVRLAATI IICIGFLLML LPEEWDEITL RFINSLKEKK ENSBTAP00000008321/1-517 AVDLLKQEVI FNVVRLAATI IICIGFLLML LPEEWDEITL RFINSLKEKK ENSTTRP00000013942/1-450 AVDLLKQEVI FNVVRLAATI IICIGFLLML LPEEWDEITL RFINSLKEKK bmy_13539T0/1-483 AVDLLKQEVI FNVVRLAATI IICIGFLLML LPEEWDEITL RFINSLKEKK BACU015376/1-362 AVDLLKQEVI FNVVRLAATI IICIGFLLML LPEEWDEITL RFINSLKEKK 501 550 ENSP00000342518/1-521 SEEHVDDVTD PSIHLRGRGR ANGTVSIPLA ENSBTAP00000008321/1-517 SEEHVDDITD SSVHLRSRSR ANGTVSIPLA ENSTTRP00000013942/1-450 SEEHVDDITD PSVHLRSRNR AIGTVSIPLA bmy_13539T0/1-483 SEEHVDDITD PSVHLRSRSR AIGAVSIPLA BACU015376/1-362 SEEHVDDITD PSVHLRSRSR AIGTVSIPLA