KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:22 2014 Check: 00 .. Name: ENSTTRP00000007238/1-474 Len: 474 Check: 3895 Weight: 1.00 Name: ENSBTAP00000008111/1-474 Len: 474 Check: 8298 Weight: 1.00 Name: ENSP00000286070/1-474 Len: 474 Check: 6370 Weight: 1.00 Name: bmy_14388T0/1-410 Len: 474 Check: 4663 Weight: 1.00 Name: BACU014073/1-474 Len: 474 Check: 9094 Weight: 1.00 // 1 50 ENSTTRP00000007238/1-474 MDEAGSCASG GGFRPGVDSL DEPPNSRIFL VISKYTPESV LRERFSPFGE ENSBTAP00000008111/1-474 MDEAGSCASG GGFRPGVDNL DEPPNSRIFL VISKYTSESV LRERFSPFGE ENSP00000286070/1-474 MDEAGSSASG GGFRPGVDSL DEPPNSRIFL VISKYTPESV LRERFSPFGD bmy_14388T0/1-410 MDEAGSCASG GGFRPGVDSL DEPPNSRIFL VISKYTPESV LRERFSPFGE BACU014073/1-474 MDEAGSCASG GGFRPGVDSL DEPPNSRIFL VISKYTPESV LRERFSPFGE 51 100 ENSTTRP00000007238/1-474 IQDIWVVRDK HTKESKGIAF VKFARSSQAC RAMEEMHGQC LSPSDTKPIK ENSBTAP00000008111/1-474 IQDIWVVRDK HTKESKGIAF VKFARSSQAC RAMEEMHGQC LTPSDTKPIK ENSP00000286070/1-474 IQDIWVVRDK HTKESKGIAF VKFARSSQAC RAMEEMHGQC LGPNDTKPIK bmy_14388T0/1-410 IQDIWVVRDK HTKESKGIAF VKFARSSQAC RAMEEMHGQC LSPSDTKPIK BACU014073/1-474 IQDIWVVRDK HTKESKGIAF VKFARSSQAC RAMEEMHGQC LSPSDTKPIK 101 150 ENSTTRP00000007238/1-474 VFIAQSRSSG SHRDVEDEEL TRIFVMIPKS YTEEDLREKF KXXXXXXXXX ENSBTAP00000008111/1-474 VFIAQSRSSG SHRDVEDEEL TRIFVMIPKS YTEEDLREKF KVFGDIEYCS ENSP00000286070/1-474 VFIAQSRSSG SHRDVEDEEL TRIFVMIPKS YTEEDLREKF KVYGDIEYCS bmy_14388T0/1-410 VFIAQSRSSG SHRDVEDEEL TRIFVMIPKS YTEEDLREKF KVYGDIEYCS BACU014073/1-474 VFIAQSRSSG SHRDVEDEEL TRIFVMIPKS YTEEDLREKF KVYGDIEYCS 151 200 ENSTTRP00000007238/1-474 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXFRAILA EPKNKASESS ENSBTAP00000008111/1-474 IIKNKVTGES KGLGYVRYLK PSQAAQAIEN CDRSYRAILA EPKNKASESS ENSP00000286070/1-474 IIKNKVTGES KGLGYVRYLK PSQAAQAIEN CDRSFRAILA EPKNKASESS bmy_14388T0/1-410 IIKNKVTGES KGLGYVRYLK PSQAAQAIEN CDRSFRAILA EPKNKASESS BACU014073/1-474 IIKNKVTGES KGLGYVRYLK PSQAAQAIEN CDRSFRAILA EPKNKASESS 201 250 ENSTTRP00000007238/1-474 EQDYYSNMRQ ETLGHEPRVN MFPFEQQSEF SSFDKNDNRG QESISKRLSV ENSBTAP00000008111/1-474 EQDYYSNMRQ ETLGHEPRVN MFSFEQQSEF SSFDKNDNRG QEAISKRLSV ENSP00000286070/1-474 EQDYYSNMRQ EALGHEPRVN MFPFEQQSEF SSFDKNDSRG QEAISKRLSV bmy_14388T0/1-410 EQDYYSNMRQ ETLGHEPRVN MFPFEQQSEF SSFDKNDNRG QEAISKRLSV BACU014073/1-474 EQDYYSNMRQ ETLGHEPRVN MFPFEQQSEF SSFDKNDNRG QEAISKRLSV 251 300 ENSTTRP00000007238/1-474 VSRVPFTEEQ LFSIFDIVPG LEYCEVQRDP YSNYGHGVVQ YFNVASAIYA ENSBTAP00000008111/1-474 VSRVPFTEEQ LFSIFDIVPG LEYCEVQRDP YSNYGHGVVQ YFNVASAIYA ENSP00000286070/1-474 VSRVPFTEEQ LFSIFDIVPG LEYCEVQRDP YSNYGHGVVQ YFNVASAIYA bmy_14388T0/1-410 VSRVPFTEEQ LFSIFDIVPG LEYCEVQRDP YSNYGHGVVQ YFNVASAIYA BACU014073/1-474 VSRVPFTEEQ LFSIFDIVPG LEYCEVQRDP YSNYGHGVVQ YFNVASAIYA 301 350 ENSTTRP00000007238/1-474 KYKLHGFQYP PGNRIGVSFI DDGSNASDLL RKMATQMVAA QLASMVWNNP ENSBTAP00000008111/1-474 KYKLHGFQYP PGNRIGVSFI DDGSNATDLL RKMATQMVAA QLASIVWNNP ENSP00000286070/1-474 KYKLHGFQYP PGNRIGVSFI DDGSNATDLL RKMATQMVAA QLASMVWNNP bmy_14388T0/1-410 KYKLHGFQYP PGNRIGVSFI DDGSNATDLL RKMATQMVAA QLASMVWNNP BACU014073/1-474 KYKLHGFQYP PGNRIGVSFI DDGSNATDLL RKMATQMVAA QLASMVWNNP 351 400 ENSTTRP00000007238/1-474 SQQQFLQFGG SSGSQLPQIQ TDVVLPSCKK KAPPETPVKE RLFIVFNPHP ENSBTAP00000008111/1-474 SQQQFLQFAG SSGSQLPQIQ TDVALPSCKK KAPPDTPVKE RLFIVFNPHP ENSP00000286070/1-474 SQQQFMQFGG SSGSQLPQIQ TDVVLPSCKK KAPAETPVKE RLFIVFNPHP bmy_14388T0/1-410 SQQQFLQFGG SSGSQLPQIQ TDVVLPSCKK KAPPETPVKE RLFIVFNPHP BACU014073/1-474 SQQQFLQFGG SSGSQLPQIQ TDVVLPSCKK KAPPETPVKE RLFIVFNPHP 401 450 ENSTTRP00000007238/1-474 LPLDVLEDIF CRFGNLIEVY LVSGKNVGYA KYADRVSAND AITTLHGKIL ENSBTAP00000008111/1-474 LPLDVLEDIF CRFGNLIEVY LVSGKNVGYA KYADRLSAND AITTLHGKIL ENSP00000286070/1-474 LPLDVLEDIF CRFGNLIEVY LVSGKNVGYA KYADRISAND AIATLHGKIL bmy_14388T0/1-410 LPLDVLEDIF ---------- ---------- ---------- ---------- BACU014073/1-474 LPLDVLEDIF CRFGNLIEVY LVSGKNVGYA KYADRISAND AITTLHGKIL 451 500 ENSTTRP00000007238/1-474 NGVRLKVMLA DSPREESNKR QRTY ENSBTAP00000008111/1-474 NGVRLKVMLA DSPREESNKR QRTY ENSP00000286070/1-474 NGVRLKVMLA DSPREESNKR QRTY bmy_14388T0/1-410 ---------- ---------- ---- BACU014073/1-474 NGVRLKVMLA DSPREESNKR QRTY