KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:28 2014 Check: 00 .. Name: ENSP00000361310/1-713 Len: 807 Check: 9451 Weight: 1.00 Name: ENSBTAP00000007900/1-710 Len: 807 Check: 985 Weight: 1.00 Name: ENSTTRP00000006009/1-708 Len: 807 Check: 2524 Weight: 1.00 Name: bmy_00042T0/1-545 Len: 807 Check: 4099 Weight: 1.00 Name: BACU015808/1-774 Len: 807 Check: 8028 Weight: 1.00 // 1 50 ENSP00000361310/1-713 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007900/1-710 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006009/1-708 ---------- ---------- ---------- ---------- ---------- bmy_00042T0/1-545 ---------- ---------- ---------- ---------- ---------- BACU015808/1-774 MCLLTICISS FVKCSVLWGD GYSLKLSIFI TFLKLYQFII FLPAVYENAC 51 100 ENSP00000361310/1-713 ---------- ---------- ---------- ---------- ----MATGQD ENSBTAP00000007900/1-710 ---------- ---------- ---------- ---------- ----MTDGRD ENSTTRP00000006009/1-708 ---------- ---------- ---------- ---------- ----MANGQD bmy_00042T0/1-545 ---------- ---------- ---------- ---------- ---------- BACU015808/1-774 FIIVSFHVPM LMVIQQWKNG NIIFFSTFYS ISFLTVHKIL SYRKMANGQD 101 150 ENSP00000361310/1-713 RVVALVDMDC FFVQVEQRQN PHLRNKPCAV VQYKSWKGGG IIAVSYEARA ENSBTAP00000007900/1-710 RVVALVDMDC -FVQVEQRQN PHLRNKPCAV VQYTSWKGGG IVAVSYEARA ENSTTRP00000006009/1-708 RVITLVDMDC FFVQVEQRQN PHLRNKPCAV AQYKSWKGGG IISVSYEARA bmy_00042T0/1-545 ---------- ---------- ---------- ---------- ---------- BACU015808/1-774 RVVTLVDMDC FFVQVEQRQN PHLRNKPCAV VQYKSWKGGG IVAVSYEARA 151 200 ENSP00000361310/1-713 FGVTRSMWAD DAKKLCPDLL LAQVRESRGK ANLTKYREAS VEVMEIMSRF ENSBTAP00000007900/1-710 FGVTRNMWAD DAKKLCPDLL LAQIRELHGK ANLTKYRDAS MEVMEVMSRF ENSTTRP00000006009/1-708 FGVTRYMWAE DAKKLCPDLL LAQVRESHGK ANLTKYREAS VEVMEVMSRF bmy_00042T0/1-545 ---------- ---------- ---------- ---------- ---------- BACU015808/1-774 FGVTRNMWAD DAKKLCPDLL LAQVRESHGK ANLTKYREAS VEVMEVMSRF 201 250 ENSP00000361310/1-713 AVIERASIDE AYVDLTSAVQ ERLQKLQGQP ISADLLPSTY IEGLPQGPTT ENSBTAP00000007900/1-710 AVMERGSIDE AYLDLTSAVQ ERLQKLQNQP ISADLLPTTC IEGFPQGPTT ENSTTRP00000006009/1-708 AVIERASIDE AYVDLTSAVQ ERLQKLQGQR LSADLLPTTC IEGLPQSPTT bmy_00042T0/1-545 ---------- ---------- ---------- ---------- ---------- BACU015808/1-774 AAIERASIDE AYVDLTSAVQ ERLQKLQ--- ---------- ---------- 251 300 ENSP00000361310/1-713 AEETVQKEGM RKQGLFQWLD SLQIDNLTSP DLQLTVGAVI VEEMRAAIER ENSBTAP00000007900/1-710 TEGTVEKEER RKQGLLQWLD SLQTESTSSP DLQLTMGAVI VEEMRAAIER ENSTTRP00000006009/1-708 AEGTVQKEEM RKQGLLQWLD SLQTDNTTSP DLQLTVGAVI VEEMRAAIER bmy_00042T0/1-545 ---------M RKQGLLQWLD SLQTDDTTSP DLQLTVGAVI VEEMRAAIER BACU015808/1-774 -------EEM RKQGLLQWLD SLQTDNTTSP DLQLTVGAVI VEEMRAAIER 301 350 ENSP00000361310/1-713 ETGFQCSAGI SHNKVLAKLA CGLNKPNRQT LVSHGSVPQL FSQMPIRKIR ENSBTAP00000007900/1-710 QTGFQCSAGI SHNKVLAKLA CGLNKPNRQT LVSHGSVPQL FNQVPISKIR ENSTTRP00000006009/1-708 QTGFQCSAGI SHNKVLAKLA CGLNKPNRQT LVSHGSVPQL FSQVPISKIR bmy_00042T0/1-545 QTGFQCSAGI SHNKVLAKLA CGLNKPNGQT LVSHGSVPQL FSQVPISKIR BACU015808/1-774 QTGLQCSAGI SHNKVLAKLA CGLNKPNRQT LVSHGSVPQL FSQVPISKIR 351 400 ENSP00000361310/1-713 SLGGKLGASV IEILGIEYMG ELTQFTESQL QSHFGEKNGS WLYAMCRGIE ENSBTAP00000007900/1-710 NLGGKLGASV IEILGVEYMG ELTQFSEPQL QSHFGERNGS WLYAMCRGIE ENSTTRP00000006009/1-708 HLGGKLGASV IETLGVEYMG ELTQFTESQL QSHFGEKNGS WLYAMCRGID bmy_00042T0/1-545 NLGGKLGASV IEILGVEYMG ELTQFTESQL QSHFGEKNGS WLYAMCRGIE BACU015808/1-774 NLGGKLGASV IEILGVEYMG ELTQFTESQL QSHFGEKNGS WLYAMCRGIE 401 450 ENSP00000361310/1-713 HDPVKPRQLP KTIGCSKNFP GKTALATREQ VQWWLLQLAQ ELEERLTKDR ENSBTAP00000007900/1-710 HDPVKPRPIT KTLGCSKNFP GKTALSTRDQ VQWWLLQLAQ ELEERLIKDR ENSTTRP00000006009/1-708 EDPVRPRQIP KIHCCSKN-A GKTALAAREQ VQWWLLQLAQ ELEERLIKDR bmy_00042T0/1-545 HEPVRSRQIT KTIGCGKNFP GKTALAAREQ VQWWLLQLAQ ELEERLIKDR BACU015808/1-774 HEPVRPRQIP KTIGCGKNFP GKTALAAPEQ VQWWLLQLAQ ELEERLIKDR 451 500 ENSP00000361310/1-713 NDNDRVATQL VVSIRVQGDK RLSSLRRCCA LTRYDAHKMS HDAFTVIKNC ENSBTAP00000007900/1-710 NANDRVATQL VVSMRIQGDR RLSSLRRCCA LTHYDAHKMS HDAFATIRNC ENSTTRP00000006009/1-708 NDNDRVATQL VVSIRVQGDR RLSSLRRCCA LPRYDAHKMS HDAFALIRNC bmy_00042T0/1-545 NDNDRVATQL AVSIRVQGDR RLSSLRRCCA LTRYDAHKMS HDAFAVIRNC BACU015808/1-774 NDNDRVATQL AVSIRVQGDR RLSSLRRCCA LTRYDAHKMS HDAFAVIRNC 501 550 ENSP00000361310/1-713 NTSGIQTEWS PPLTMLFLCA TKFSASAPSS STDITSFLSS DPSSLPKVPV ENSBTAP00000007900/1-710 NTSGTQTEWA PPLIMLFLCA TKFCSSTPSP GPDITTFLSS DPSSLPKVPI ENSTTRP00000006009/1-708 NTSGTQTEWS PPLTMVFLCA TKFSASAPSP GTDITIFLSS DPSSPSKVPI bmy_00042T0/1-545 NTSVTQTEWS PPLTMVFLCA TKFSASAPSP GTDITIFLSS DPSSPSKVPI BACU015808/1-774 NTSVTQTEWS PPLTMVFLCA TKFSASAPSP GTDITIFLSS DPSSPSKVPI 551 600 ENSP00000361310/1-713 TSSEAKTQGS GPAVTATKKA TTSLESFFQK AAERQKVKEA SLSSLTAPTQ ENSBTAP00000007900/1-710 TSSEAKTQGS GPAVTTPKKA TTSLESFFQK AAEKHKVKEA SLSSPTATTQ ENSTTRP00000006009/1-708 TRSEDKTQEN GPAVTTTKKA TTSLESFFQK AAEKQKVKEA SLSSLTATTQ bmy_00042T0/1-545 TSSEAKTQEN GPAVTTTKKA TTSLESFFQK AAEKQKVKEA SLSSLTATTQ BACU015808/1-774 TSSEAKTQEN GPAVTTTKKA TTSLESFFQK AAEKQKVKEA SLSSLTATTQ 601 650 ENSP00000361310/1-713 APMSNSPSKP SLPFQTSQST GTEPFFKQKS LLLKQKQLNN SSVSSPQQNP ENSBTAP00000007900/1-710 APMSPS-SKP SLPFQSSHTM GTEPFFKQKS LLLKQKQLTN PSVFFPSQKP ENSTTRP00000006009/1-708 APISNSPSKP SLPFQTSHTS GTEPFFKQKS LLLKQKQLTN --VFFPPQKP bmy_00042T0/1-545 APISNSPSKP SLPFQTSRTS GTEPFFKQKS LLLKQKQLTN --VFFPPQKP BACU015808/1-774 APISNSPSKP SLPFQTSRTS GTEPFFKQKS LLLKQKQLTN --VFFPPQKP 651 700 ENSP00000361310/1-713 WSNCKALPNS LPTEYPGCVP VCEGVSKLEE SSKATPAEMD LAHNSQSMHA ENSBTAP00000007900/1-710 QSSPKELPNC FPTENPDCAP DCEKMLKL-G SPKTTPTEMD LAQNSLSSLA ENSTTRP00000006009/1-708 QSSPKELPNC FPTECPDCAP VCEKVLKL-G SFKATPAEMD LAQNSLSSLA bmy_00042T0/1-545 QSSPKELPNC FPAECPDCAP VCEKVLKL-G SFKATPAEMD LAQNSLSSLT BACU015808/1-774 QSSPKELPNC FPAECPDCAP VCEKVLKL-G SFKATPAEMD LAQNSLSSLT 701 750 ENSP00000361310/1-713 SSASKSVLEV TQKATPNPSL LAAEDQVPCE KCGSLVPVWD MPEHMDYHFA ENSBTAP00000007900/1-710 SLTSTSALEV AQKATMTSSF LAAEDQVPCE KCGSLVPVWD MPEHSDYHFA ENSTTRP00000006009/1-708 SLTSKSALEV AQKAPTTSSL LAAEDQVPCE KCGSLVPVWE MPEHTDYHFA bmy_00042T0/1-545 SLTSKSALEV AQKATTTSSL LAAEDQVPCE KCGSLVPVWE MPEHTDYHFA BACU015808/1-774 SLTSKSALEV AQKATTTSSL LAAEDQVPCE KCGSLVPVWE MPEHTDYHFA 751 800 ENSP00000361310/1-713 LELQKSFLQP HSSNPQVVSA VSHQGKRNPK SPLACTNKRP RPEGMQTLES ENSBTAP00000007900/1-710 LELQNSFLQP HSSNPQVVPA SSPQSKRNPK SPLASNNKRP RPEGMQTLES ENSTTRP00000006009/1-708 LDLQKSFLQP H-SNPRVAPA SSPQGKRNPK SPLASRNKRP RPEGMQTLES bmy_00042T0/1-545 LDLQKSFLQP HSSNPQVVPA SSPQGKRNPK SPLASNNKRP RPEGMQTLES BACU015808/1-774 MDLQKSFLQP HSSNPQVVPA SSPQGKRNPK SPLASNNKRP RPQGMQTLES 801 850 ENSP00000361310/1-713 FFKPLTH ENSBTAP00000007900/1-710 FFKPLTH ENSTTRP00000006009/1-708 FFKPLTH bmy_00042T0/1-545 FFKPLTH BACU015808/1-774 FFKPLTH