KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:49 2014 Check: 00 .. Name: ENSP00000264674/1-1116 Len: 1116 Check: 8297 Weight: 1.00 Name: BACU017834/1-988 Len: 1116 Check: 8108 Weight: 1.00 Name: ENSBTAP00000007717/1-1051 Len: 1116 Check: 1326 Weight: 1.00 Name: bmy_14366T0/1-647 Len: 1116 Check: 6185 Weight: 1.00 Name: ENSTTRP00000002022/1-1051 Len: 1116 Check: 4958 Weight: 1.00 // 1 50 ENSP00000264674/1-1116 MILDEFYNVK FCIDASQPDV GSWLKYIRFA GCYDQHNLVA CQINDQIFYR BACU017834/1-988 -ILDEFCNVK FCIDASQPDV GSWLKYIRFA GCYDQHNLVA CQINDQIFYR ENSBTAP00000007717/1-1051 ---------- ---------- ---------- ---------- ---------- bmy_14366T0/1-647 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002022/1-1051 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000264674/1-1116 VVADIAPGEE LLLFMKSEDY PHETMAPDIH EERQYRCEDC DQLFESKAEL BACU017834/1-988 VVADIAPGEE LLLLMKSEDY PHDTMAPDIH EERQYRCEDC DQLFESKAEL ENSBTAP00000007717/1-1051 ---------- ----MKSEDY SHETMAPDIH EERQYRCEDC DQLFESKAEL bmy_14366T0/1-647 ---------- ---------- ---------- -ERQYRCEDC DQLFESKAEL ENSTTRP00000002022/1-1051 ---------- ----MKSEDY PHDTMAPDIH EERQYRCEDC DQLFESKAEL 101 150 ENSP00000264674/1-1116 ADHQKFPCST PHSAFSMVEE DFQQKLESEN DLQEIHTIQE CKECDQVFPD BACU017834/1-988 ADHQKFPCST PHTAFSMVEE DFQQKLDSEN DLREIHAIQE CKECDQVFPD ENSBTAP00000007717/1-1051 ADHQKFPCST PHSAFSMVED DFQQKLETEN DLREIHAIQE CKECDQVFPD bmy_14366T0/1-647 ADHQKFPCST PHSAFSMVEE DFQQKLDSEN DLREIHAIQE CKECDQVFPD ENSTTRP00000002022/1-1051 ADHQKFPCST PHSAFSMVEE DFQQKLESEN DLREIHAIQE CKECDQVFPD 151 200 ENSP00000264674/1-1116 LQSLEKHMLS HTEEREYKCD QCPKAFNWKS NLIRHQMSHD SGKHYECENC BACU017834/1-988 LQSLEKHMLS HTEEREYKCD QCPKAFNWKS NLIRHQMSHD SGKHYECENC ENSBTAP00000007717/1-1051 LQSLEKHMLS HTEEREYKCD QCPKAFNWKS NLIRHQMSHD SGKHYECENC bmy_14366T0/1-647 LQSLEKHMLS HTEEREYKCD QCPKAFNWKS NLIRHQMSHD SGKHYECENC ENSTTRP00000002022/1-1051 LQSLEKHMLS HTEEREYKCD QCPKAFNWKS NLIRHQMSHD SGKHYECENC 201 250 ENSP00000264674/1-1116 AKQVFTDPSN LQRHIRSQHV GARAHACPEC GKTFATSSGL KQHKHIHSSV BACU017834/1-988 AK-VFTDPSN LQRHIRSQHV GARAHACPEC GKTFATSSGL KQHKHIHSSV ENSBTAP00000007717/1-1051 AK-VFTDPSN LQRHIRSQHV GARAHACPEC GKTFATSSGL KQHKHIHSSV bmy_14366T0/1-647 AK-VFTDPSN LQRHIRSQHV GARAHACPEC GKTFATSSGL KQHKHIHSS- ENSTTRP00000002022/1-1051 AK-VFTDPSN LQRHIRSQHV GARAHACPEC GKTFATSSGL KQHKHIHSSV 251 300 ENSP00000264674/1-1116 KPFICEVCHK SYTQFSNLCR HKRMHADCRT QIKCKDCGQM FSTTSSLNKH BACU017834/1-988 KPFICEVCHK SYTQFSNLCR HKRMHADCRT QIKCKDCGQM FSTTSSLNKH ENSBTAP00000007717/1-1051 KPFICEVCHK SYTQFSNLCR HKRMHADCRT QIKCKDCGQM FSTTSSLNKH bmy_14366T0/1-647 -----EVCHK SYTQFSNLCR HKRMHADCRT QIKCKDCGQM FSTTSSLNKH ENSTTRP00000002022/1-1051 KPFICEVCHK SYTQFSNLCR HKRMHADCRT QIKCKDCGQM FSTTSSLNKH 301 350 ENSP00000264674/1-1116 RRFCEGKNHF AAGGFFGQGI SLPGTPAMDK TSMVNMSHAN PGLADYFGAN BACU017834/1-988 RRFCEGKNHF AAGGFFGQGI SLPGTPAMDK TSMVNMSHAN PGLADYFGAN ENSBTAP00000007717/1-1051 RRFCEGKNHF AAGGFFGQGI SLPGTPAMDK TSMVNMSHAN PGLADYFGAN bmy_14366T0/1-647 RRFCEGKNHF AAGGFFGQGI SLPGTPAMDK TSMVNMSHAN PGLADYFGAN ENSTTRP00000002022/1-1051 RRFCEGKNHF AAGGFFGQGI SLPGTPAMDK TSMVNMSHAN PGLADYFGAN 351 400 ENSP00000264674/1-1116 RHPAGLTFPT APGFSFSFPG LFPSGLYHRP PLIPASSPVK GLSSTEQTNK BACU017834/1-988 RHPAGLTFPT APGFSFSFPG LFPSGLYHRP PLIPASSPVK GLSSTEQTNK ENSBTAP00000007717/1-1051 RHPAGLTFPT APGFSFSFPG LFPSGLYHRP PLIPASSPVK GLSSTEQTNK bmy_14366T0/1-647 RHPAGLTFPT APGFSFSFPG LFPSGLYHRP PLIPASSPVK GLSSTEQTNK ENSTTRP00000002022/1-1051 RHPAGLTFPT APGFSFSFPG LFPSGLYHRP PLIPASSPVK GLSSTEQTNK 401 450 ENSP00000264674/1-1116 SQSPLMTHPQ ILPATQDILK ALSKHPSVGD NKPVELQPER SSEERPFEKI BACU017834/1-988 SQSPLMTHPQ ILPATQDILK ALSKHPPVGE NKPVELQPER SSEERPLEKI ENSBTAP00000007717/1-1051 SQSPLMTHPQ ILPATQDILK ALSKHPPVGD NKPVELQPER SSEERPLEKI bmy_14366T0/1-647 SQSPLMTHPQ ILPATQDILK ALSKHPPVGE NKPVELQPER SSEERPLEKI ENSTTRP00000002022/1-1051 SQSPLMTHPQ ILPATQDILK ALSKHPPVGD DKPVEFQPER SSEERPLEKI 451 500 ENSP00000264674/1-1116 SDQSESSDLD DVSTPSGSDL ETTSGSDLES DIESDKEKFK ENGKMFKDKV BACU017834/1-988 SDQSESSDLD DVSTPSGSDL ETTSGSDLES DIESDKEKFK EN-------- ENSBTAP00000007717/1-1051 SDQSESSDLD DVSTPSGSDL ETTSGSDLES DIESDKEKFK ENGKMFKDKV bmy_14366T0/1-647 SDQSESSDLD DVSTPSGSDL ETTSGSDLES DIESDKEKFK ENGKMFKDKV ENSTTRP00000002022/1-1051 SDQSESSDLD DVSTPSGSDL ETTSGSDLES DIESDKEKFK ENGKMFKDKV 501 550 ENSP00000264674/1-1116 SPLQNLASIN NKKEYSNHSI FSPSLEEQTA VSGAVNDSIK AIASIAEKYF BACU017834/1-988 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007717/1-1051 SPLQNLASIH NKKEYSNHSI FSPSLEEQTA VSGAVNDSIK AIASIAEKYF bmy_14366T0/1-647 SPLPNLASIH NKKEYSNHSI FSPSLEEQTA VSGAVNDSIK AIASIAEKYF ENSTTRP00000002022/1-1051 SPLPNLASIH NKKEYSNHSI FSPSLEEQTA VSGAVNDSIK AIASIAEKYF 551 600 ENSP00000264674/1-1116 GSTGLVGLQD KKVGALPYPS MFPLPFFPAF SQSMYPFPDR DLRSLPLKME BACU017834/1-988 ---------- ---------- --------AF SQSMYPFPDR DLRSLPLKME ENSBTAP00000007717/1-1051 GSTGLVGLQD KKVGALPYPS MFPLPFFPAF SQSMYPFPDR DLRSLPLKME bmy_14366T0/1-647 GSAGLVGLQD KKVGALPYPS MFPLPFFPAF SQSMYPFPDR DLRSLPLKME ENSTTRP00000002022/1-1051 GSAGLVGLQD KKVGALPYPS MFPLPFFPAF SQSMYPFPDR DLRSLPLKME 601 650 ENSP00000264674/1-1116 PQSPGEVKKL QKGSSESPFD LTTKRKDEKP LTPVPSKPPV TPATSQDQPL BACU017834/1-988 PQSPSEVKKL QKGSSESPFD LTTKRKDEKP LTPVPAKPPV TPATSQDQPL ENSBTAP00000007717/1-1051 PQSPSEVKKL QKGSSESPFD LTTKRKDEKP LTPVPAKPSA TPAASQDQPL bmy_14366T0/1-647 PQSPSEVKKL QKGSSESPFD LTTKRKDEKP LTPVPAKPPV TPATSQDQPL ENSTTRP00000002022/1-1051 PQSPSEVKKL QKGSSESPFD LTTKRKDEKP LTSVPAKPPV TPATSQDQPL 651 700 ENSP00000264674/1-1116 DLSMGSRSRA SGTKLTEPRK NHVFGGKKGS NVESRPASDG SLQHARPTPF BACU017834/1-988 DLSMGSRSRA SGTKLTEPRK NHVFGEKKGG NGEPRPASDG SLQHARPTPF ENSBTAP00000007717/1-1051 DLSMGSRSRA SGTKLTEPRK NHVFGEKKGG NIEPRPASDG SLQHARPTPF bmy_14366T0/1-647 DLSMGSRSRA TGTRLTEPRK NHVFGEKKGG NGEPRPASDG SLQHARPTPF ENSTTRP00000002022/1-1051 DLSMGSRSRA SGTKLTEPRK NHVFGEKKGG NGEPRPAPDG SLQHARPTPF 701 750 ENSP00000264674/1-1116 FMDPIYRVEK RKLTDPLEAL KEKYLRPSPG FLFHPQFQLP DQRTWMSAIE BACU017834/1-988 FMDPIYR--- ---SVSIEAL DMPF------ --YQTHERPK LTSFSMSAIE ENSBTAP00000007717/1-1051 FMDPIYRVEK RKLTDPLEAL KEKYLRPSPG FLFHPQFQLP DQRTWMSAIE bmy_14366T0/1-647 FMDPIYRVEK RKLTDPLEAL KEKYLRPSPG FLFHP----- ---------- ENSTTRP00000002022/1-1051 FMDPIYRVEK RKLTDPLEAL KEKYLRPSPG FLFHPQXXXX XXXXXMSAIE 751 800 ENSP00000264674/1-1116 NMAEKLESFS ALKPEASELL QSVPSMFNFR APPNALPENL LRKGKERYTC BACU017834/1-988 NMAEKLESFS ALKPEASELL QSVPSMFNFR APPNALPENL LRKGKERYTC ENSBTAP00000007717/1-1051 NMAEKLENFS ALKPEASELL QSVPSMFNFR APPNALPENL LRKGKERYTC bmy_14366T0/1-647 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002022/1-1051 NMAEKLESFS ALKPEASELL QSVPSMFNFR APPNALPENL LRKGKERYTC 801 850 ENSP00000264674/1-1116 RYCGKIFPRS ANLTRHLRTH TGEQPYRCKY CDRSFSISSN LQRHVRNIHN BACU017834/1-988 ---------- ---------- ------RCKY CDRSFSISSN LQRHVRNIHN ENSBTAP00000007717/1-1051 RYCGKIFPRS ANLTRHLRTH TGEQPYRCKY CDRSFSISSN LQRHVRNIHN bmy_14366T0/1-647 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002022/1-1051 RYCGKIFPRS ANLTRHLRTH TGEQPYRCKY CDRSFSISSN LQRHVRNIHN 851 900 ENSP00000264674/1-1116 KEKPFKCHLC DRCFGQQTNL DRHLKKHENG NMSGTATSSP HSELESTGAI BACU017834/1-988 KEKPFKCHLC DRCFGQQTNL DRHLKKHENG NMSGTATSSP HSELESTGAI ENSBTAP00000007717/1-1051 KEKPFKCHLC DRCFGQQTNL DRHLKKHENG NMSGTATSSP HSELESTGAI bmy_14366T0/1-647 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002022/1-1051 KEKPFKCHLC DRCFGQQTNL DRHLKKHENG NMSGTATSSP HSELESTGAI 901 950 ENSP00000264674/1-1116 LDDKEDAYFT EIRNFIGNSN HGSQSPRNVE ERMNGSHFKD EKALVTSQNS BACU017834/1-988 LDDKEDAYFT EIRNFIGNSN HSSQSPRNTE ERMNGSHFKD EKALVTSQNS ENSBTAP00000007717/1-1051 LDDKEDAYFT EIRNFIGNSN HGSQSPRNAE ERMNGSHFKD EKALVTNQNS bmy_14366T0/1-647 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002022/1-1051 LDDKEDAYFT EIRNFIGNSN HGSQSPRNTE ERMNGSHFKD EKALVTSQNS 951 1000 ENSP00000264674/1-1116 DLLDDEEVED EVLLDEEDED NDITGKTGKE PVTSNLHEGN PEDDYEETSA BACU017834/1-988 DLLDDEEVED EVLLDEEDED NDITGKTGKE PGTSNLHEGN HEDDYEDTSA ENSBTAP00000007717/1-1051 DLLDDEEVED EVLLDEEDED NDITGKMGKE PGTSNLHEGN PEDDYEDTST bmy_14366T0/1-647 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002022/1-1051 DLLDDEEVED EVLLDEEDED NDITGKTGKE PGTSTLHEGN HEDDYEDTSA 1001 1050 ENSP00000264674/1-1116 LEMSCKTSPV RYKEEEYKSG LSALDHIRHF TDSLKMRKME DNQYSEAELS BACU017834/1-988 LEMSCKTSPM RYKEEEYKTG LSALDHIRHF TDSLKMRKME DNQYTEAEVS ENSBTAP00000007717/1-1051 LEMSCKASPM RYKEEEYKTG LSALDHIRHF TDSLKMRKME DNQYTEAEVS bmy_14366T0/1-647 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002022/1-1051 LEMSCKTSPM RYKEEEYKTG LSALDHIRHF TDSLKMRKME DNQYTEAEVS 1051 1100 ENSP00000264674/1-1116 SFSTSHVPEE LKQPLHRKSK SQAYAMMLSL SDKESLHSTS HSSSNVWHSM BACU017834/1-988 SFSASHVPEE LKQPLHRKSK SQAYAMMLSL SDKESLHSSP HNSSNVWHSM ENSBTAP00000007717/1-1051 SFSASHVPEE LKQPLHRKSK SQAYAMMLSL SDKESLHSSS HSSSNVWHSM bmy_14366T0/1-647 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002022/1-1051 SFSASHVPEE LKQPLHRKSK SQAYAMMLSL SDKESLHSSS HNSSNVWHSM 1101 1150 ENSP00000264674/1-1116 ARAAAESSAI QSISHV BACU017834/1-988 ARAAAESSAI QSISHV ENSBTAP00000007717/1-1051 ARAAAESSAI QSISHV bmy_14366T0/1-647 ---------- ------ ENSTTRP00000002022/1-1051 ARAAAESSAI QSISHV