KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:41 2014 Check: 00 .. Name: BACU017902/1-226 Len: 231 Check: 5613 Weight: 1.00 Name: ENSP00000350260/1-198 Len: 231 Check: 5778 Weight: 1.00 Name: ENSBTAP00000007687/1-191 Len: 231 Check: 3129 Weight: 1.00 Name: ENSTTRP00000007573/1-193 Len: 231 Check: 7847 Weight: 1.00 Name: bmy_01498T0/1-200 Len: 231 Check: 1722 Weight: 1.00 // 1 50 BACU017902/1-226 MATAEPSGTA VRASHPAPRP SGT-----GA AGPPTERSGI GVPWLGERTP ENSP00000350260/1-198 MATAEPSGRA LRLSTPGPRP SGARDRAPGA AGPPSGQIGN RALRLGERTP ENSBTAP00000007687/1-191 MATADPDGHA A-PSIPGPRP SGT-----GA AGLPSGRSGI GAPRLGERIP ENSTTRP00000007573/1-193 MATAEPSEPA ARASLPAPRP SGT-----GA AGPPTERSGI GVPWLGKRTP bmy_01498T0/1-200 MATAEPSGPE VRASHPAPRP SGT-----GA AGPPTERSGI GVPWLGERTP 51 100 BACU017902/1-226 AAVEKRGPYM VARAPSSQAK LQKHRDLAKA VLRRKRMLGA APNRPDSSGK ENSP00000350260/1-198 AAVEKRGPYM VTRAPSIQAK LQKHRDLAKA VLRRKGMLGA SPNRPDSSGK ENSBTAP00000007687/1-191 AAVEKRGPYM VARAPSIQAK LKKHRDLAKA VLRRKGMLGA APNRPDSSGK ENSTTRP00000007573/1-193 AAVEKRGPYM VARAPSSQAK LQKHRDLAKA VLRRKGMLGA APNRPDSSGK bmy_01498T0/1-200 AAVEKRGPYM VARAPSSQAK LQKHRDLAKA VLRRKRMLGA APNRPDSSGK 101 150 BACU017902/1-226 RSVKFNKGYT ALSQSPDENL VSLDSDRPFV HVPGLLLQST ISSQDGLLRG ENSP00000350260/1-198 RSVKFNKGYT ALSQSPDENL VSLDSD---- ---------- ---SDGELGS ENSBTAP00000007687/1-191 RSVKFNKGYT ALSQSPDENL VSLDSD---- ---------- ---SDGELES ENSTTRP00000007573/1-193 RSVKFNKGYT ALSQSPDENL VSLDSD---- ---------- ---SDGELES bmy_01498T0/1-200 RSVKFNKGYT ALSQSPDENL VSLDSD---- ---------- ---SDGELES 151 200 BACU017902/1-226 LIGDLAALGF EAPTLSGGVI LPYYVCTVNQ DVSRQLLQDG YHLDEIPDDE ENSP00000350260/1-198 RYSS----GY SSAEQ----- -------VNQ DVSRQLLQDG YHLDEIPDDE ENSBTAP00000007687/1-191 RYSS----GY SSAEQ----- -------VNQ DVSRQLLQDG YHLDEIPDDE ENSTTRP00000007573/1-193 RYSS----GY SSAEQ----- -------VNQ DVSRQLLQDG YHLDEIPDDE bmy_01498T0/1-200 RYSS----GY SSAEAS---- -PEHLSVVNQ DVSRQLLQDG YHLDEIPDDE 201 250 BACU017902/1-226 DLDLIPPKPM TSSTCSCCWC CLRDASFCTL Q ENSP00000350260/1-198 DLDLIPPKPM ASSTCSCCWC CLGDSSSCTL Q ENSBTAP00000007687/1-191 DLDLIPPKPM T-STCSCCWC CLGASSSCTL Q ENSTTRP00000007573/1-193 DLDLIPPKPM TSSTCSCCWC CLRDASSCTL Q bmy_01498T0/1-200 DLDLIPPKPM TSSTCSCCWC CLRDASFCTL Q