KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:34 2014 Check: 00 .. Name: ENSP00000367545/1-636 Len: 644 Check: 1365 Weight: 1.00 Name: ENSBTAP00000007643/1-640 Len: 644 Check: 7347 Weight: 1.00 Name: ENSTTRP00000003223/1-638 Len: 644 Check: 299 Weight: 1.00 Name: BACU001134/1-568 Len: 644 Check: 9477 Weight: 1.00 Name: bmy_21479T0/1-340 Len: 644 Check: 2810 Weight: 1.00 // 1 50 ENSP00000367545/1-636 -MAQSTATSP DGGTTFEHLW SSLEPDSTYF DLPQSSRGNN EVVGGTDSSM ENSBTAP00000007643/1-640 MSQSTQPAAA DEGATFQHLW SSLEPDSTYF DLPQPGQGNE EVAGGAEAGM ENSTTRP00000003223/1-638 ---MSQSTAT DEGATFQHLW SSLEPDSTYF DLPQPGQGND EVVGGAEASM BACU001134/1-568 ---------- ---------- ---------- ---------- ---------- bmy_21479T0/1-340 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000367545/1-636 DVFHLEGMTT SVMAQFNLLS STMDQMSSRA AS-ASPYTPE HAAS--VPTH ENSBTAP00000007643/1-640 DVFHLPGMTT SVMSQFNLLS STMDQMSSRA AS-ASPYTPE HAAS--VPTH ENSTTRP00000003223/1-638 DVFHLQGMTT SVMSQFHLLS STMDQMSSRA AP-GSPYAPE HAASANVPTH BACU001134/1-568 ---------- ---------- --MDQLGSRA ASAGSPYAPE HAAR--VPSH bmy_21479T0/1-340 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000367545/1-636 SPYAQPSSTF DTMSPAPVIP SNTDYPGPHH FEVTFQQSST AKSATWTYSP ENSBTAP00000007643/1-640 SPYAQPSSTF DTMSPAPVIP SNTDYPGPHH FEVTFQQSST AKSATWTYSP ENSTTRP00000003223/1-638 SPYAQPSSTF DTMSPAPVIP SNTDYPGPHH FEVTFQQSST AKSAT-TYSP BACU001134/1-568 SPYAQPSSTF DAMSPAPAIP SNADYPGPHH FEVTFQQSST AKSATWTYSP bmy_21479T0/1-340 ---------M ASLTPVPTPP ---------- ---------- -----LQYSP 151 200 ENSP00000367545/1-636 LLKKLYCQIA KTCPIQIKVS TPPPPGTAIR AMPVYKKAEH VTDVVKRCPN ENSBTAP00000007643/1-640 LLKKLYCQIA KTCPIQIKVS APPPPGTAIR AMPVYKKAEH VTEVVKRCPN ENSTTRP00000003223/1-638 LLKKLYCQIA KTCPIQIKVS TPPPPGTVIR AMPIYKKAEH VTEVVKRCPN BACU001134/1-568 LLKKLYCQIA KTCPIQTKVS TPPPPGTVIR AMPIYKKAEH VTEVVKRCPN bmy_21479T0/1-340 LLKKLYCQIA KTCPIQIKVS TPPPPGTVIR AMPIYKKAEH VTEVVKRCPN 201 250 ENSP00000367545/1-636 HELGRDFNEG QSAPASHLIR VEGNNLSQYV DDPVTGRQSV VVPYEPPQVG ENSBTAP00000007643/1-640 HELGRDFNEG QSAPASHLIR VEGNNLSQYV DDPVTGRQSV MVPYEPPQVG ENSTTRP00000003223/1-638 HELGRDFNEG QSAPASHLIR VEGNNLSQYV DDPVTGRQSV MVPYEPPQVG BACU001134/1-568 HELGRDFNEG QSAPASHLIR VEGNNLSQYV DDPVTGRQSV MVPYEPPQVG bmy_21479T0/1-340 HELGRDFNEG QSAPASHLVR VEGNNLSQYV DDPVTGRQSV MVPYEPPQVG 251 300 ENSP00000367545/1-636 TEFTTILYNF MCNSSCVGGM NRRPILIIIT LEMRDGQVLG RRSFEGRICA ENSBTAP00000007643/1-640 TEFTTILYNF MCNSSCVGGM NRRPILIIIT LETRDGQVLG RRSFEGRICA ENSTTRP00000003223/1-638 TEFTTILYNF MCNSSCVGGM NRRPILIIIT LETRDGQVLG RRSFEGRICA BACU001134/1-568 TEFTTILYNF MCNSSCVGGM NRRPILIIIT LETRDGQVLG RRSFEGRICA bmy_21479T0/1-340 TEFTTILYNF MCNSSCVGGM NRRPILIIIT LETRDGQVLG RRSFEGRICA 301 350 ENSP00000367545/1-636 CPGRDRKADE DHYREQQALN ESSAKNGAAS KRAFKQSPPA VPALGAGVKK ENSBTAP00000007643/1-640 CPGRDRKADE DHYREQQALN ESAAKSGAAS KRAFKQSPPT APALGTNVKK ENSTTRP00000003223/1-638 CPGRDRKADE DHFREQQALN ESAARSGAAS KRAFKQSPPA LPALSTNGKK BACU001134/1-568 CPGRDRKADE DHFREQQALN ESAAKSGAAS KRAFKQSPPA IPALSTNVKK bmy_21479T0/1-340 CPGRDRKADE DHFREQQALN ESAAKSGAAS KRAFKQSPPA IPALSTNVKK 351 400 ENSP00000367545/1-636 RRHGDEDTYY LQVRGRENFE ILMKLKESLE LMELVPQPLV DSYR-QQQQL ENSBTAP00000007643/1-640 RRHGDDDVYY IHVRGRENFE ILMKVKESLE LMELVPQQLV DSYRQQQQQL ENSTTRP00000003223/1-638 KRHGDEETYY IHVRGRENFE ILMKVKESLE LMELVPQQLV ESYR-QQQQL BACU001134/1-568 KRHGDEETYY IHVRGRENFE ILMKVKESLE LMELVPPQLV ESYR-QQQQL bmy_21479T0/1-340 KRHGDEETYY IH-------- ---------- ---------- ---------- 401 450 ENSP00000367545/1-636 LQRPSHLQPP SYGPVLSPMN KVHGGMNKLP SVNQLVGQPP PHSSAATPNL ENSBTAP00000007643/1-640 LQRPSHLQPP SYGPVLSPMS KAHGAVNKLP SVNQLVGQPP PHGSAAGPNL ENSTTRP00000003223/1-638 LQRPGHLQPP SYGPVLSPVS KAHGAVNKLP SVNQLVGQPP LHGSAAAPSL BACU001134/1-568 LQRPSHLQPP SYGPVLSPMN KAHGAVNKLP SVNQLVGQPP LHGSAAGPNL bmy_21479T0/1-340 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000367545/1-636 GPVGPGMLNN HGHAVPANGE MSSSHSAQSM VSGSHCTPPP PYHADPSLVS ENSBTAP00000007643/1-640 GPMGPGILNN HGHTLPANGE MNGGPSSQSM VSGSHCTPPP PYHADSSLVS ENSTTRP00000003223/1-638 GPMGPGILNN HGHALPANGE INGGPSSQSM VSGSHCTPPP PYHADPSLVS BACU001134/1-568 GPMGPGILNN HGHALPANGE INGGPSSQSM VSGSHCTPPP PYHADPSLVS bmy_21479T0/1-340 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000367545/1-636 FLTGLGCPNC IEYF-TSQGL QSIYHLQNLT IEDLGALKIP EQYRMTIWRG ENSBTAP00000007643/1-640 FLTGLGCPNC IEYF-TSQGL QNIYHLQNLT IEDLGALKIP DQYRMTIWRG ENSTTRP00000003223/1-638 FLTGLGCPNC IEYFXXXXXX XXXXXXXXXX XXDLGALKIP DQHRMTIWRG BACU001134/1-568 FLTGLGCPNC IEYF-TSQGL QNIYHLQNLT IEDLGALKIP DQHRMTIWRG bmy_21479T0/1-340 ---------- ---------- ---------- --DLGALKIP DQHRMTIWRG 551 600 ENSP00000367545/1-636 LQDLKQGHDY STAQQLLRSS NAATISIGGS GELQRQRVME AVHFRVRHTI ENSBTAP00000007643/1-640 LQDLKQSHDY SAQQLIRSSS NAATIAIGGS GELQRQRVME AVHFRVRHTI ENSTTRP00000003223/1-638 LQDLKQSHDY GAQQLIRSSS NAATIAIGGS GELQRQRVME AVHFRVRHTI BACU001134/1-568 LQDLKQSHDY GAQQLIRSSG NAATIAIGGS GELQRQRVME AVHFRVRHTI bmy_21479T0/1-340 LQDLKQSHDY GAQQLIRSSS NAATIAIGGS GELQRQRVME AVHFRVRHTI 601 650 ENSP00000367545/1-636 TIPNRGGPGG --GPDEWADF GFDLPDCKAR KQPIKEEFTE AEIH ENSBTAP00000007643/1-640 TIPNRGGPAG GAGPDEWADF GFDLPDCKSR KQSIKEEFTE SEAN ENSTTRP00000003223/1-638 TIPNRGGPAG GAGPDEWADF GFDLPDCKSR KQSIKEEFTE SEAN BACU001134/1-568 TIPNRAGPAG GAGPDEWADF GFDLPDCKSR KQSIKEEFTE SEAN bmy_21479T0/1-340 TIPNRGGPAG GAGPDEWADF GFDLPDCKSR KQSIKEEFTE SEAN