KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:39 2014 Check: 00 .. Name: ENSP00000363124/1-1012 Len: 1074 Check: 3385 Weight: 1.00 Name: ENSBTAP00000007321/1-1010 Len: 1074 Check: 2229 Weight: 1.00 Name: ENSTTRP00000016157/1-976 Len: 1074 Check: 782 Weight: 1.00 Name: bmy_00596T0/1-801 Len: 1074 Check: 9184 Weight: 1.00 Name: BACU015526/1-1034 Len: 1074 Check: 2714 Weight: 1.00 // 1 50 ENSP00000363124/1-1012 MTKHPPNRRG ISFEVGAQLE ARDRLKNWYP AHIEDIDYEE GKVLIHFKRW ENSBTAP00000007321/1-1010 MTKHPPNRRG ISFEVGAQLE ARDRLKNWYP AHIEDIDYEE GKVLIHFKRW ENSTTRP00000016157/1-976 MTKHPPNRRG ISFEVGAQLE ARDRLKNWYP AHIEDIDYEE GKVLIHFKRW bmy_00596T0/1-801 ---------- ---------- ---------- ---------- ---------- BACU015526/1-1034 MTKHPPNRRG ISFEVGAQLE ARDRLKNWYP AHIEDIDYEE GKVLIHFKRW 51 100 ENSP00000363124/1-1012 NHRYDEWFCW DSPYLRPLEK IQLRKEGLHE EDGSSEFQIN EQVLACWSDC ENSBTAP00000007321/1-1010 NHRYDEWFCW DSPYLRPLEK IQLRKEGLHE EEGSSEFQIN EQVLACWSDC ENSTTRP00000016157/1-976 NHRYDEWFCW DSPYLRPLEK IQLRKEGLHE EEGSSEFQIN EQVLACWSDC bmy_00596T0/1-801 ---------- ---------- ---------- ---------- ---------- BACU015526/1-1034 NHRYDEWFCW DSPYLRPLEK IQLRKEGLHE EEGSSEFQIN EQVLACWSDC 101 150 ENSP00000363124/1-1012 RFYPAKVTAV NKDGTYTVKF YDGVVQTVKH IHVKAFSKDQ NIVGNARPKE ENSBTAP00000007321/1-1010 RFYPAKVTAV NKDGTYTVKF YDGVVQTVKH IHVKAFSKDQ NIVGNARPKE ENSTTRP00000016157/1-976 RFYPARVTAV NKDGTYTVKF YDGVVQTVKH IHVKAFSKDQ NIVDNARPKE bmy_00596T0/1-801 ---------- ----TYTVKF YDGVVQTVKH IHVKAFSKDQ NIVGNARPKE BACU015526/1-1034 RFYPARVTAV NKDGTYTVKF YDGVVQTVKH IHVKAFSKDQ NIVGNARPKE 151 200 ENSP00000363124/1-1012 TDHKSLSSSP DKREKFKEQR KATVNVKKDK EDKPLKTEKR PKQPDKEGKL ENSBTAP00000007321/1-1010 TEHKSLLSS- DKREKFKEQR KPTAIVKKDK EDKALKTEKR AKQSDKEGKL ENSTTRP00000016157/1-976 TEHKSLSSSP DKREKFKEQR KATANVKKDK EDKALKTEKR PKQPDKEGKL bmy_00596T0/1-801 TEHKSLSSSP DKREKFKEQR KATANVKKDK EDKALKTEKR PKQPDKEGKL BACU015526/1-1034 TEHKSLSSSP DKREKFKEQR KATANVKKDK EDKALKTEKR PKQPDKEGKL 201 250 ENSP00000363124/1-1012 ICSEKGKVSE KSLPKNEKED KENISENDRE YSGDAQVDKK PENDIVKSPQ ENSBTAP00000007321/1-1010 ICAEKGKASE KSLPKNEKED KENISENDRE YSGDAQVDKK PEKDIVKSPQ ENSTTRP00000016157/1-976 ICSEKGKVSE KSLPKNEKED KENISENDRE YSGDAQVDKK PENDIVKSPQ bmy_00596T0/1-801 ICSEKGKVSE KSLPKNEKED KENISENDRE YSGDAQVDKK PENDIVKSPQ BACU015526/1-1034 ICSEKGKVSE KSLPKNEKED KENISENDRE YSGDAQVDKK PENDIVKSPQ 251 300 ENSP00000363124/1-1012 ENLREPKRKR GRPPSIAPTA VDSNSQTLQP ITLELRRRKI SKGCEVPLKR ENSBTAP00000007321/1-1010 ENLREPKRKR GRPPSIAPTA VDSNSQTLQP ITLELRRRKI SKGNEVPLKR ENSTTRP00000016157/1-976 ENLREPKRKR GRPPSIAPTA VDSNSQTLQP ITLELRRRKI SKGSEVPLKR bmy_00596T0/1-801 ESLREPKRKR GRPPSIAPTA ---------- ---------- ---------- BACU015526/1-1034 ESLREPKRKR GRPPSIAPTA ---------- ---------- ---------- 301 350 ENSP00000363124/1-1012 PRLDKNSSQE KSKNYSENTD KDLSRRRSSR LSTNGTHEIL DPDLVVSDLV ENSBTAP00000007321/1-1010 PRLDKNSSQE KSKNYSENTD KDLSRRRSSR LSTNGTHEIL DPDLVVSDLV ENSTTRP00000016157/1-976 PRLDKNSSQE KSKNYSENTD KDLSRRRSSR LSTNGTHEIL DPDLVVSDLV bmy_00596T0/1-801 --------QE KSKNYSENTD KDLSRRRSSR LSTNGTHEIL DPDLVVSDLV BACU015526/1-1034 --------QE KSKNYSENTD KDLSRRRSSR LSTNGTHEIL DPDLVVSDLV 351 400 ENSP00000363124/1-1012 D---TDPLQD TLSSTKESEE GQLKSALEAG QVSSALTCHS FGDGSGAAGL ENSBTAP00000007321/1-1010 DTVNTDPLQN TSSNTKESEE GQLKSPLEAG QVSSTITCHS IGDGLGPAGL ENSTTRP00000016157/1-976 DTVTTDPLQN TSSGTKESEE GQLKSPLEAG QVSSALTCHS IGDG------ bmy_00596T0/1-801 DTVTTDPLQN TSSGTKESEE ---------- ---------- ---------- BACU015526/1-1034 DTVTTDPLQN TSSGTKESEE GQLKSPLEAG QVSSALTCHS IGDGLGPAGL 401 450 ENSP00000363124/1-1012 ELNCPSMGEN TMKTEPTSPL VELQEISTVE ---------- ---------- ENSBTAP00000007321/1-1010 ELNCKSMGEN TMKTEPASPL AELQEISTVA ---------- ---------- ENSTTRP00000016157/1-976 ---------- ---------- ---------- ---------- ---------- bmy_00596T0/1-801 ---------- ---------- ---------- ---------- ---------- BACU015526/1-1034 ELNCKSMGEN TMKTEPASPL AELQEISTVA GYYPQLIYTL FAACLTLMLV 451 500 ENSP00000363124/1-1012 ---------- ---------- ---------- ---------V TNTFKKTDDF ENSBTAP00000007321/1-1010 ---------- ---------- ---------- ---------V TNTLKRTNDF ENSTTRP00000016157/1-976 ---------- ---------- ---------- ---------L TNTCKKTDDF bmy_00596T0/1-801 ---------- ---------- ---------- ---------V TNTCKKTDDF BACU015526/1-1034 LIVFSPHCKT KTSNSFCLIK VAILRRALGL ARGFMTVTPV TNTCKKTDDF 501 550 ENSP00000363124/1-1012 GSSNAPAVDL DHKFRCKVVD CLKFFRKAKL LHYHMKYFHG MEKSLEPEES ENSBTAP00000007321/1-1010 VTSKAPASDL NHKFRCTVVD CLKFFRKAKL LHYHMKYFHG IEKSPEPEEN ENSTTRP00000016157/1-976 VTSKAPAVDL DHKFRCKVVD CLKFFRKAKL LHYHMKYFHG MEKSPEPEEN bmy_00596T0/1-801 VTSKAPAVDL DHKFRCKVVD CLKFFRKAKL LHYHMKYFHG MEKSPEPEEN BACU015526/1-1034 VTSKAPAVDL DHKFRCKVVD CLKFFRKAKL LHYHMKYFHG MEKSPEPEEN 551 600 ENSP00000363124/1-1012 PGKRHVQTRG PSASDKPSQE TLTRKRVSAS SPTTKDKEKN KEKKFKEFVR ENSBTAP00000007321/1-1010 PGKRHVQTRG SSASDKASQE SLTRKRVSAS SPTAKDKEKN KEKKFKEFVR ENSTTRP00000016157/1-976 SGKRHVQTRG SSASDKASQE SLTRKRVSAS SPTAKDKEKN KEKKFKEFVR bmy_00596T0/1-801 SGKRHVQTRG SSASDKASQE SLTRKRVSAS SPTAKDKEKN KEKKFKEFVR BACU015526/1-1034 SGKRHVQTRG SSASDKASQE SLTRKRVSAS SPTAKDKEKN KEKKFKEFVR 601 650 ENSP00000363124/1-1012 VKPKKKKKKK KKTKPECPCS EEISDTSQEP SPPKAFAVTR CGSSHKPGVH ENSBTAP00000007321/1-1010 VKPKKKKKKK KKTKPECPCS EEVSDTPQEP SPPKTFAVTK CGSSHKPGVH ENSTTRP00000016157/1-976 VKPKKKKKKK KKTKPECPCS EEISDTSQEP SPPKAFAVTR CGSSHKPGVH bmy_00596T0/1-801 VKPKKKKKKK KKTKPECPCN EEISDASQEP SPPKAFAVTR CGSSHKPGVH BACU015526/1-1034 VKPKKKKKKK KKTKPECPCN EEISDASQEP SPPKAFAVTR CGSSHKPGVH 651 700 ENSP00000363124/1-1012 MSPQLHGPES GHHKGKVKAL EEDNLSESSS ESFLWSDDEY GQDVDVTTNP ENSBTAP00000007321/1-1010 MSPQIQGSES GNHRGKVKVS EEDNLSESSS ESFLWSDEEY GQDIDVTTNP ENSTTRP00000016157/1-976 MSPQLHGSES GNYKGKVKMS EEDNLSDSSS ESFLWSDEEY GQDVDVTTNP bmy_00596T0/1-801 MSPQLHGSES GNHKGKVKMS EEDNLSDSSS ESFLWSDEEY GQDVDVTTNP BACU015526/1-1034 MSPQLHGSES GNHKGKVKMS EEDNLSDSSS ESFLWSDEEY GQDVDVTTNP 701 750 ENSP00000363124/1-1012 DEELDGDDRY DFEVVRCICE VQEENDFMIQ CEECQCWQHG VCMGLLEENV ENSBTAP00000007321/1-1010 DEELDGDDRY DFEVVRCICE VQEENDFMIQ CEECQCWQHG VCMGLLEENV ENSTTRP00000016157/1-976 DEELDGEDRY DFEVVRCICE VQEENDFMIQ CEECQCWQHG VCMGLLEENV bmy_00596T0/1-801 DEELDGEDRY DFEVVRCICE VQEENDFMIQ CEECQCWQHG VCMGLLEENV BACU015526/1-1034 DEELDGEDRY DFEVVRCICE VQEENDFMIQ CEECQCWQHG VCMGLLEENV 751 800 ENSP00000363124/1-1012 PEKYTCYVCQ DPPGQRPGFK YWYDKEWLSR GHMHGLAFLE ENYSHQNAKK ENSBTAP00000007321/1-1010 PEKYTCYVCR DPPGQRPGFK YWYDKEWLSR GHMHGLAFLE ENYSHQNAKK ENSTTRP00000016157/1-976 -EKYTCYVCQ DPPGQRPGFK YWYDKEWLSR GHMHGLAFLE ENYSHQNAKK bmy_00596T0/1-801 PEKYTCYVCQ DPPGQRPGFK YWYDKEWLSR GHMHGLAFLE ENYSHQNAKK BACU015526/1-1034 PEKYTCYVCQ DPPGQRPGFK YWYDKEWLSR GHMHGLAFLE ENYSHQNAKK 801 850 ENSP00000363124/1-1012 IVATHQLLGD VQRVIEVLHG LQLKMSILQS REHPDLPLWC QPWKQHSGEG ENSBTAP00000007321/1-1010 IVATHQLLGD VQRVIEVLHG LQLKMSILQS RGHPDLQLWC QPWKQHLAEG ENSTTRP00000016157/1-976 IVATHQLLGD VQRVIEVLHG LQLKMSILQS REHPDLQLWC QPWKQHLAEG bmy_00596T0/1-801 IVATHQLLGD VQRVIEVLHG LQLKMSILQS REHPDLQLWC QPWKQHLAEG BACU015526/1-1034 IVATHQLLGD VQRVIEVLHG LQLKMSILQS REHPDLQLWC QPWKQHLAEG 851 900 ENSP00000363124/1-1012 RSHFRNIPVT DTRSKEEAPS YRTLNGAVEK PRPLALPLPR SVEESYITSE ENSBTAP00000007321/1-1010 RSHSKHIRVT EAKSREEAPS YRTLNGAMEK P----LPLPT SVEESYITSE ENSTTRP00000016157/1-976 RSHSKHIHVT EAKSREEAPS YRTLNGAVEK PLP--LPLPR SVEESYITSE bmy_00596T0/1-801 RSHSKHIHVT EAKSREEAPS YRTLNGAVEK PLP--LPLPR SVEESYITSE BACU015526/1-1034 RSHSKHIHVT EAKSREEAPS YRTLNGAVEK PLP--LPLPR SVEESYITSE 901 950 ENSP00000363124/1-1012 HCYQKPRAYY PAVEQKLVVE TRGSALDDAV NPLHENGDDS LSPRLGWPLD ENSBTAP00000007321/1-1010 HCYQKPRTYY PAVEQKLVVE TRRSALDDAV NPRHENGDDS LSPRLGWPLD ENSTTRP00000016157/1-976 HCYQKPRTYY PAVEQKLVVE TRRSALDDAV NPLHENGDDS LSPRLGWPLE bmy_00596T0/1-801 HCYQKPRTYY PAVEQKLVVE TRRSALDDAV NPLHENGDDS LSPRLGWPLE BACU015526/1-1034 HCYQKPRTYY PAVEQKLVVE TRRSALDDAV NPLHENGDDS LSPRLGWPLE 951 1000 ENSP00000363124/1-1012 QDRSKGDSDP KPGSPKVKEY VSKKALPEEA PARKLLDRGG EGLLSSQHQW ENSBTAP00000007321/1-1010 QDRSRGDSDP KPSSPKVREY VSKKVLPEEA PARKLLDRGG EGLLSSQHQW ENSTTRP00000016157/1-976 QDRSRGDSDP KPSSPKVREY VSRKVLPEEA PARKLLDRGG EGLLSSQHQW bmy_00596T0/1-801 QDRSRGDSDP KPSSPKVREY VSKKVLPEEA PARKLLDRGG EGLLSSQHQW BACU015526/1-1034 QDRSRGDSDP KPSSPKVREY VSKKVLPEEA PARKLLDRGG EGLLSSQHQW 1001 1050 ENSP00000363124/1-1012 QFNLLTHVES LQDEVTHRMD SIEKELDVLE SWLDYTGELE PPEPLARLPQ ENSBTAP00000007321/1-1010 QFNLLTHVES LQDEVTHRMD SIEKELDVLE SWLDYTGELE PPEPLARLPQ ENSTTRP00000016157/1-976 QFNLLTHVES LQDEVTHRMD SIEKELDVLE SWLDYTGELE PPEPLARLPQ bmy_00596T0/1-801 QFNLLTHVES LQDEVTHRMD SIEKELDVLE SWLDYTGELE PPEPLARLPQ BACU015526/1-1034 QFNLLTHVES LQDEVTHRMD SIEKELDVLE SWLDYTGELE PPEPLARLPQ 1051 1100 ENSP00000363124/1-1012 LKHCIKQLLM DLGKVQQIAL CCST ENSBTAP00000007321/1-1010 LKHCIKQLLT DLGKVQQIAL CCST ENSTTRP00000016157/1-976 LKHCIKQLLT DLGKVQQIAL CCST bmy_00596T0/1-801 LKHCIKQLLT DLGKVXQIAL CCST BACU015526/1-1034 LKHCIKQLLT DLGKVQQIAL CCST