KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:06 2014 Check: 00 .. Name: ENSP00000386597/1-408 Len: 443 Check: 1228 Weight: 1.00 Name: ENSBTAP00000007065/1-408 Len: 443 Check: 2204 Weight: 1.00 Name: ENSTTRP00000002631/1-408 Len: 443 Check: 2247 Weight: 1.00 Name: bmy_03248T0/1-443 Len: 443 Check: 8353 Weight: 1.00 Name: BACU017338/1-408 Len: 443 Check: 3100 Weight: 1.00 // 1 50 ENSP00000386597/1-408 MWAFSELPMP LLINLIVSLL GFVATVTLIP AFRGHFIAAR LCGQDLNKTS ENSBTAP00000007065/1-408 MWAFPELPMP LLVNLIGSLM GFVATVTLIP AFRGHFIAAR LCGQDLNKSS ENSTTRP00000002631/1-408 MWAFPELPMP LLVNLIGSLL GLVATLTLIP AFRGHFIAAR LCGQDLNKSS bmy_03248T0/1-443 MWAFPELPTP LLVNLIGSLL GLVATLTLIP AFRGHFIAAR LCGQDLNKSS BACU017338/1-408 MWAFPELPTP LLVNLIGSLL GLVATLTLIP AFRGHFIAAR LCGQDLNKSS 51 100 ENSP00000386597/1-408 RQQIPESQGV ISGAVFLIIL FCFIPFPFLN CFVKEQCKAF PHHE------ ENSBTAP00000007065/1-408 REQIPESQGV ISGAVFLIIL FCFIPFPFLN CFVEQQCKAF PHHE------ ENSTTRP00000002631/1-408 RQQIPESQGV ISGAVFLIIL FCFIPFPFLN CFVEEQCKAF PHHE------ bmy_03248T0/1-443 RQQIPESQGV ISGAVFLIIL FCFIPFPFLN CFVEEQCKAF PHHEVSGLVR BACU017338/1-408 RQQIPESQGV ISGAVFLIIL FCFIPFPFLN CFVEEQCKAF PHHE------ 101 150 ENSP00000386597/1-408 ---------- ---------- ---------F VALIGALLAI CCMIFLGFAD ENSBTAP00000007065/1-408 ---------- ---------- ---------F VALIGALLAI CCMIFLGFAD ENSTTRP00000002631/1-408 ---------- ---------- ---------F VALIGALLAI CCMIFLGFAD bmy_03248T0/1-443 AAACGWDWEL LERVGVIWAG AVTCPSLPQF VALIGALLAI CCMIFLGFAD BACU017338/1-408 ---------- ---------- ---------F VALIGALLAI CCMIFLGFAD 151 200 ENSP00000386597/1-408 DVLNLRWRHK LLLPTAASLP LLMVYFTNFG NTTIVVPKPF RPILGLHLDL ENSBTAP00000007065/1-408 DVLNLRWRHK LLLPTAASLP LLMVYFTNFG NTTIVVPKPL RPILGLHLDL ENSTTRP00000002631/1-408 DVLNLRWRHK LLLPTAASLP LLMVYFTNFG NTTIVVPKPL RPLLGLHLDL bmy_03248T0/1-443 DVLNLRWRHK LLLPTAASLP LLMVYFTNFG NTTIVVPKPL RPLXGLHLDL BACU017338/1-408 DVLNLRWRHK LLLPTAASLP LLMVYFTNFG NTTIVVPKPL RPLLGLHLDL 201 250 ENSP00000386597/1-408 GILYYVYMGL LAVFCTNAIN ILAGINGLEA GQSLVISASI IVFNLVELEG ENSBTAP00000007065/1-408 GILYYVYMGL LAVFCTNAIN ILAGINGLEA GQSLVISASI IVFNLVELDG ENSTTRP00000002631/1-408 GILYYVYMGL LAVFCTNAIN ILAGINGLEA GQSLVISASI IVFNLVELEG bmy_03248T0/1-443 GILYYVYMGL LAVFCTNAIN ILAGINGLEA GQSLVISASI IVFNLVELEG BACU017338/1-408 GILYYVYMGL LAVFCTNAIN ILAGINGLEA GQSLVISASI IVFNLVELEG 251 300 ENSP00000386597/1-408 DCRDDHVFSL YFMIPFFFTT LGLLYHNWYP SRVFVGDTFC YFAGMTFAVV ENSBTAP00000007065/1-408 DYRDDHIFSL YFMIPFFFTT LGLLYHNWYP SRVFVGDTFC YFAGMTFAVV ENSTTRP00000002631/1-408 DCRDDHVFSL YFMIPFFFTT LGLLYHNWYP SRVFVGDTFC YFAGMTFAVV bmy_03248T0/1-443 DYRDDHVFSL YFMIPFFFTT LGLLYHNWYP SRVFVGDTFC YFAGMTFAVV BACU017338/1-408 DYRDDHVFSL YFMIPFFFTT LGLLYHNWYP SRVFVGDTFC YFAGMTFAVV 301 350 ENSP00000386597/1-408 GILGHFSKTM LLFFMPQVFN FLYSLPQLLH IIPCPRHRIP RLNIKTGKLE ENSBTAP00000007065/1-408 GILGHFSKTM LLFFMPQVFN FLYSLPQLLH IIPCPRHRMP RLNTKTGKLE ENSTTRP00000002631/1-408 GILGHFSKTM LLFFMPQVFN FVYSLPQLLH IIPCPRHRIP RLNTKTGKLE bmy_03248T0/1-443 GILGHFSKTM LLFFMPQVFN FVYSLPQLLH IIPCPRHRIP RLNTKTGKLE BACU017338/1-408 GILGHFSKTM LLFFMPQVFN FVYSLPQLLH IIPCPRHRIP RLNTKTGKLE 351 400 ENSP00000386597/1-408 MSYSKFKTKS LSFLGTFILK VAESLQLVTV HQSETEDGEF TECNNMTLIN ENSBTAP00000007065/1-408 MSYSKFKTKS LSFLGTFILK VAENLGLLTV RHSEDEDGAF TECNNMTLIN ENSTTRP00000002631/1-408 MSYSKFKTKS LSFLGTFILK VAEGLRLVTV RQSENEDGAF TECNNMTLIN bmy_03248T0/1-443 MSYSKFKTKS LSFLGTFILK VAEGLRLVTV RQSENEDGAF TECNNMTLIN BACU017338/1-408 MSYSKFKTKS LSFLGTFILK VAEGLRLVTV RQSENEDGAF TECNNMTLIN 401 450 ENSP00000386597/1-408 LLLKVLGPIH ERNLTLLLLL LQILGSAITF SIRYQLVRLF YDV ENSBTAP00000007065/1-408 LLLKVFGPMH ERNLTLLLLL LQVVGSAVTF SIRYQLVRLF YDV ENSTTRP00000002631/1-408 LLLKVFGPMH ERNLTLFLLL LQVVGSAVTF SIRYQLVRLF YDV bmy_03248T0/1-443 FVLKVFGPMH ERNLTLFLLL LQVVGSAVTF SIRYQLVRLF YDV BACU017338/1-408 FLIKVFGPMH ERNLTLFLLL LQVVGSAVTF SIRYQLVRLF YDV