KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:37 2014 Check: 00 .. Name: ENSTTRP00000015953/1-486 Len: 514 Check: 6301 Weight: 1.00 Name: ENSP00000410584/1-486 Len: 514 Check: 6077 Weight: 1.00 Name: ENSBTAP00000006498/1-475 Len: 514 Check: 9515 Weight: 1.00 Name: bmy_14122T0/1-357 Len: 514 Check: 5865 Weight: 1.00 Name: BACU008794/1-294 Len: 514 Check: 8271 Weight: 1.00 // 1 50 ENSTTRP00000015953/1-486 MYIKMATLAN GQADNASLST NGLGSSPGSA GHMNGLSHSP GNPSTIPMKD ENSP00000410584/1-486 MYIKMATLAN GQADNASLST NGLGSSPGSA GHMNGLSHSP GNPSTIPMKD ENSBTAP00000006498/1-475 MYIKMATLAN GQADNASLST SGLGSSPGSA GHMNGLSHSP GNPSTIPMKD bmy_14122T0/1-357 ---------- ---------- ---------- ---------- ---------- BACU008794/1-294 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015953/1-486 HDAIKLFIGQ IPRNLDEKDL KPLFEEFGKI YELTVLKDRF TGMHKGCAFL ENSP00000410584/1-486 HDAIKLFIGQ IPRNLDEKDL KPLFEEFGKI YELTVLKDRF TGMHKGCAFL ENSBTAP00000006498/1-475 HDAIKLFIGQ IPRNLDEKDL KPLFEEFGKI YELTVLKDRF TGMHKGCAFL bmy_14122T0/1-357 ---------- ---------- ---------- ---------- ---------- BACU008794/1-294 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000015953/1-486 TYCERESALK AQSALHEQKT LPGMNRPIQV KPADSESRGG SSCLRQPPSQ ENSP00000410584/1-486 TYCERESALK AQSALHEQKT LPGMNRPIQV KPADSESRGG SSCLRQPPSQ ENSBTAP00000006498/1-475 TYCERESALK AQSALHEQKT LPGMNRPIQV KPADSESRG- ---------- bmy_14122T0/1-357 ---------- ---------- ---------- ---------- ---------- BACU008794/1-294 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000015953/1-486 DRKLFVGMLN KQQSEDDVRR LFEAFGNIEE CTILRGPDGN SKGCAFVKYS ENSP00000410584/1-486 DRKLFVGMLN KQQSEDDVRR LFEAFGNIEE CTILRGPDGN SKGCAFVKYS ENSBTAP00000006498/1-475 DRKLFVGMLN KQQSEDDVRR LFEAFGNIEE CTILRGPDGN SKGCAFVKYS bmy_14122T0/1-357 -------MLN KQQSEDDVRR LFEAFGNIEE CTILRGPDGN SKGCAFVKYS BACU008794/1-294 ---------- ---------- ---------- ---------- --GCAFVKYS 201 250 ENSTTRP00000015953/1-486 SHAEAQAAIN ALHGSQTMPG ASSSLVVKFA DTDKERTMRR MQQMAGQMGM ENSP00000410584/1-486 SHAEAQAAIN ALHGSQTMPG ASSSLVVKFA DTDKERTMRR MQQMAGQMGM ENSBTAP00000006498/1-475 SHAEAQAAIN ALHGSQTMPG ASSSLVVKFA DTDKERTMRR MQQMAGQMGM bmy_14122T0/1-357 SHAEAQAAIN ALHGSQTMPG ASSSLVVKFA DTDKERTMRR MQQMAGQMGM BACU008794/1-294 SHAEAQAAIN ALHGSQTMPG ASSSLVVKFA DTDKERTMRR MQQMAGQMGM 251 300 ENSTTRP00000015953/1-486 FNPMAIPFGA YGAYAQALMQ QQAALMASVA QGGYLNPMAA FAAAQMQQMA ENSP00000410584/1-486 FNPMAIPFGA YGAYAQALMQ QQAALMASVA QGGYLNPMAA FAAAQMQQMA ENSBTAP00000006498/1-475 FNPMAIPFGA YGAYAQALMQ QQAALMASVA QGGYLNPMAA FAAAQMQQMA bmy_14122T0/1-357 FNPMAIPFGA YGAYAQALMQ QQAALMASVA QGGYLNPMAA FAAAQMQQMA BACU008794/1-294 FNPMAIPFGA YGAYAQALMQ QQAALMASVA QGGYLNPMAA FAAAQMQQMA 301 350 ENSTTRP00000015953/1-486 ALNMNGLAAA PMTPTSGGST PPGITAPAVP SIPSPIGVNG FTGLPPQANG ENSP00000410584/1-486 ALNMNGLAAA PMTPTSGGST PPGITAPAVP SIPSPIGVNG FTGLPPQANG ENSBTAP00000006498/1-475 ALNMNGLAAA PMTPTSGGST PPGITAPAVP SIPSPIGVNG FTGLPPQANG bmy_14122T0/1-357 ALNMNGLAAA PMTPTSGGST PPGITAPAVP SIPSPIGVNG FTGLPPQANG BACU008794/1-294 ALNMNGLAAA PMTPTSGGST PPGITAPAVP SIPSPIGVNG FTGLPPQANG 351 400 ENSTTRP00000015953/1-486 QPAAEAVFAN GIHPYP---- --------AQ SPTAADPLQQ AYAGVQQYAG ENSP00000410584/1-486 QPAAEAVFAN GIHPYP---- --------AQ SPTAADPLQQ AYAGVQQYAG ENSBTAP00000006498/1-475 QPAAEAVFAN GIHPYP---- --------AQ SPTAADPLQQ AYAGVQQYAG bmy_14122T0/1-357 QPAAEAVFAN GIHPYPGIAD LCPLGSPAAQ SPTAADPLQQ AYAGVQQYAG BACU008794/1-294 QPAAEAVFAN GIHPYP---- --------AQ SPTAADPLQQ AYAGVQQYAG 401 450 ENSTTRP00000015953/1-486 PAAYPAAYGQ ISQAFPQPPP MIPQQQREGP EGCNLFIYHL PQEFGDAELM ENSP00000410584/1-486 PAAYPAAYGQ ISQAFPQPPP MIPQQQREGP EGCNLFIYHL PQEFGDAELM ENSBTAP00000006498/1-475 PAAYPAAYGQ ISQAFPQPPP MIPQQQREGP EGCNLFIYHL PQEFGDAELM bmy_14122T0/1-357 PAAYPAAYGQ ISQAFPQPPP MIPQQQREGP EGCNLFIYHL PQEFGDAELM BACU008794/1-294 PAAYPAAYGQ ISQAFPQPPP MIPQQQREGP EGCNLFIYHL PQEFGDAELM 451 500 ENSTTRP00000015953/1-486 QMFLPFG--- ---------- ---FVSFDNP ASEQTAIQAM NGFQIGMKRL ENSP00000410584/1-486 QMFLPFG--- ---------- ---FVSFDNP ASAQTAIQAM NGFQIGMKRL ENSBTAP00000006498/1-475 QMFLPFG--- ---------- ---FVSFDNP ASAQTAIQAM NGFQIGMKRL bmy_14122T0/1-357 QMFLPFGNVI SSKVFVDRAT NQSFVSFDNP ASAQTAIQAM NGFQIGMKRL BACU008794/1-294 QMFLPFG--- ---------- ---FVSFDNP ASAQTAIQAM NGFQIGMKRL 501 550 ENSTTRP00000015953/1-486 KVQLKRPKDA NRPY ENSP00000410584/1-486 KVQLKRPKDA NRPY ENSBTAP00000006498/1-475 KVQLKRPKDA NRPY bmy_14122T0/1-357 KVQLKRPKDA NRPY BACU008794/1-294 KVQLKRPKDA NRPY