KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:28:31 2014 Check: 00 .. Name: bmy_13327T0/1-306 Len: 632 Check: 3128 Weight: 1.00 Name: ENSP00000299871/1-629 Len: 632 Check: 5962 Weight: 1.00 Name: BACU005968/1-506 Len: 632 Check: 8523 Weight: 1.00 Name: ENSBTAP00000006171/1-507 Len: 632 Check: 7166 Weight: 1.00 // 1 50 bmy_13327T0/1-306 MFMFHLSHSR ---------- ---------- ---------- --QGGVTFED ENSP00000299871/1-629 MLGFPPGRPQ LPVQLRPQTR MATALRDPAS VPIATEVLFK LTQGSVTFED BACU005968/1-506 ---------- ---------- ---------- ---------- ---GSVTFED ENSBTAP00000006171/1-507 LGVRTLENPR ---------- ---------- ---------- --QGSVTFED 51 100 bmy_13327T0/1-306 IALYFSWEEW KLLDEAQRRL YHDVMLENFA LISSLG---- ---------- ENSP00000299871/1-629 VAVYFSWEEW DLLDEAQKHL YFDVMLENFA LTSSLGLISS WSHVVAQLGL BACU005968/1-506 VALYFSWEEW ALLDEAQRCL YHDVMLENFA LTSSLG---- ---------- ENSBTAP00000006171/1-507 VAVYFSWEEW ALLDEAQRCL YHDVMLENFA LTSSLG---- ---------- 101 150 bmy_13327T0/1-306 ---------- ---------- ---------- --------CC CGAEDAEAPF ENSP00000299871/1-629 GEVPSVLHRM FMTPASARWD QRGPGLHEWH LGKGMSSGCW CGVEHEETPS BACU005968/1-506 ---------- ---------- ---------- --------CW HEVEDKEASP ENSBTAP00000006171/1-507 ---------- ---------- ---------- --------YW HGVEDKEAPS 151 200 bmy_13327T0/1-306 QRSISI-SMS QARTPRAGSF SQKSHPCKKC SLVLRGIFHL AEHEEAQHSQ ENSP00000299871/1-629 EQRISGERVP QFRTSKEGSS SQNADSCEIC CLVLRDILHL AEHQGTNCGQ BACU005968/1-506 EQSISVEGVS QIRTPKAISS PQKAQPFEMW GPILRDILHL SEHQGMHLGQ ENSBTAP00000006171/1-507 EQSICI-GVS QIRTLKVDSS PHKGQPFEMC GPVLRDILHF PEHQETHLGQ 201 250 bmy_13327T0/1-306 KVFGCRICMK RFHFSANLQK HQKQHMEEKS FRNAVVRALF VKSCKCHVSG ENSP00000299871/1-629 KLHTCG---K QFYISANLQQ HQRQHITEAP FRSYVDTASF TQSCIVHVSE BACU005968/1-506 KPYTCG---K RFYFTPNLQQ CQGQHIGKIP IRSSADRDLY IKSCTTHLSG ENSBTAP00000006171/1-507 KPYTCG---N RFYISANLQQ YQEQHIGEIP IRSSVDTALI INSCTTHVSG 251 300 bmy_13327T0/1-306 KPFTCEEVGK DFLATLGHLQ QQTTHTREKP NKIAQREATL PSRESHYSRG ENSP00000299871/1-629 KPFTCREIRK DFLANMRFLH QDATQTGEKP NNSNKCAVAF YSGKSHHNWG BACU005968/1-506 KSIICVEIAK DFLASMGFFN QQVIHTEEKP NNSNECEAVF HSGKKHENWG ENSBTAP00000006171/1-507 KPTVYGEIGN DFLVNVGFFH ----HTEEKP NNSNECEAVS HNGKRHENWG 301 350 bmy_13327T0/1-306 ECKKAFSPKH ALVQDQG--- ---------- ---------- -----VHPGR ENSP00000299871/1-629 KCSKAFSHID TLVQDQRILT REGLFECSKC GKACTRRCNL IQHQKVHSEE BACU005968/1-506 EGKKALNCTD TLVEAQGVLT REGLYECSKC GKACTRRCNL IQHQKVHTGE ENSBTAP00000006171/1-507 EGNKALNCTD TLVEDQRVLT REGLYECSK- ---CTRRCNL IQHQKVHTGE 351 400 bmy_13327T0/1-306 HCFVCSECGK TFRYKSSFIV HQRVHT---- ---------- ---------- ENSP00000299871/1-629 RPYECNECGK FFTYYSSFII HQRVHTGERP YACPECGKSF SQIYSLNSHR BACU005968/1-506 RPYECHECGK FFTYLSSFII HQRVHTGERP YKCSECGKSF SQSYSLNSHR ENSBTAP00000006171/1-507 RPYECHECGK LFTYLSSFII HQRVHSGERP YECSECGKSF SQSYSLNSHR 401 450 bmy_13327T0/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000299871/1-629 KVHTGERPYE CGECGKSFSQ RSNLMQHRRV HTGERPYECS ECGKSFSQNF BACU005968/1-506 KVHTGEKPYE CRECGKSFSQ RSNLIQHQRI HTGERPYECS ECGKSFSQNF ENSBTAP00000006171/1-507 KVHTGEKPYE CRECGKSFSQ RSNLIQHQRV HTGERPYECS ECGKSFSQNF 451 500 bmy_13327T0/1-306 ---------- GERLHVCREC GKSFRRTSTL NLHRRIHTGA RQYKCSKCGK ENSP00000299871/1-629 SLIYHQRVHT GERPHECNEC GKSFSRSSSL IHHRRLHTGE RPYECSKCGK BACU005968/1-506 SLIYHQRVHT GERPHQCGEC GKSFSRSSSL IHHRRLHTGE RPYECSKCGK ENSBTAP00000006171/1-507 SLIYHRRVHT GERPHQCSEC GKSFSRSSSL IHHRRLHTGE RPYECSKCGK 501 550 bmy_13327T0/1-306 SFN------- ---------- ---------- ---------- ---------- ENSP00000299871/1-629 SFKQSSSFSS HRKVHTGERP YVCGECGKSF SHSSNLKNHQ RVHTGERPVE BACU005968/1-506 SFKQSSSFSS HRKVHTGERP YECGDCGKSF SHSSNLKNHW RVHTGERPIE ENSBTAP00000006171/1-507 SFKQSSSFSS HRKVHTGERP YECGDCGKSF SHSSNLKNHW RVHTGERPVE 551 600 bmy_13327T0/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000299871/1-629 CSECSKSFSC KSNLIKHLRV HTGERPYECS ECGKSFSQSS SLIQHRRVHT BACU005968/1-506 CSECGKSFSC KSNLVKHLRV HTGERPYECG DCGKSFSQSS SLIQHQRVHT ENSBTAP00000006171/1-507 CSECGKSFSC KSNLVKHLRV HTGERPYECV ECGKSFSQSS SLIQHQRVHI 601 650 bmy_13327T0/1-306 ---------- ---------- ---------- -- ENSP00000299871/1-629 GKRPYQCSQC GKSFGCKSVL IQHQRVHIGE KP BACU005968/1-506 GKRS------ ---------- ---------- -- ENSBTAP00000006171/1-507 GKR------- ---------- ---------- --