KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:49 2014 Check: 00 .. Name: ENSTTRP00000009580/1-437 Len: 440 Check: 1485 Weight: 1.00 Name: ENSP00000345571/1-437 Len: 440 Check: 4996 Weight: 1.00 Name: ENSBTAP00000005182/1-439 Len: 440 Check: 9185 Weight: 1.00 Name: bmy_00557T0/1-345 Len: 440 Check: 585 Weight: 1.00 Name: BACU015557/1-204 Len: 440 Check: 1225 Weight: 1.00 // 1 50 ENSTTRP00000009580/1-437 MAVAGAPTGG PCAPALEALL GAGALRLLDS SQIVIISTAQ DASAPPAPAG ENSP00000345571/1-437 MALAGAPAGG PCAPALEALL GAGALRLLDS SQIVIISAAQ DASAPPAPTG ENSBTAP00000005182/1-439 MAVAGAPAGG SCAPALEALL GAGALRLLDS SQIVIISTAQ DASAPPAPAG bmy_00557T0/1-345 ---------- ---------- ---------- ---------- ---------- BACU015557/1-204 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000009580/1-437 PAAPAAGPRD PDLLLFATPQ APRPTPSAPR PALGRPPVKR RLDLETDHQY ENSP00000345571/1-437 PAAPAAGPCD PDLLLFATPQ APRPTPSAPR PALGRPPVKR RLDLETDHQY ENSBTAP00000005182/1-439 PAAPAAGPRD PDLLLFATPQ APRPTPSAPR PALGRPPVKR RLNLETDHQY bmy_00557T0/1-345 ---------- ---------- ---------- ---------- ---LETDHQY BACU015557/1-204 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000009580/1-437 LAESSGPARG RGRHPGKGVK SPGEKSRYET SLNLTTKRFL ELLSRSADGV ENSP00000345571/1-437 LAESSGPARG RGRHPGKGVK SPGEKSRYET SLNLTTKRFL ELLSHSADGV ENSBTAP00000005182/1-439 LAESSGPARG RGRHPGKGVK SPGEKSRYET SLNLTTKRFL ELLSRSADGV bmy_00557T0/1-345 LAESSGPARG RGRHPGKGVK SPGEKSRYET SLNLTTKRFL ELLSRSADGV BACU015557/1-204 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000009580/1-437 VDLNWAAEVL KVQKRRIYDI TNVLEGIQLI AKKSKNHIQW LGSHAAVGIG ENSP00000345571/1-437 VDLNWAAEVL KVQKRRIYDI TNVLEGIQLI AKKSKNHIQW LGSHTTVGVG ENSBTAP00000005182/1-439 VDLNWAAEVL KVQKRRIYDI TNVLEGIHLI AKKSKNHIQW LGSHATVGIS bmy_00557T0/1-345 VDLNWAAEVL KVQKRRIYDI TNVLEGIQLI AKKSKNHIQW LGSHAAVGIG BACU015557/1-204 ---MWS---- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000009580/1-437 GRLEGLTQDL QQLQESERQL DHLIHMCTTQ LRLLSEDADS QR--LAYVTC ENSP00000345571/1-437 GRLEGLTQDL RQLQESEQQL DHLMNICTTQ LRLLSEDTDS QR--LAYVTC ENSBTAP00000005182/1-439 GRLEGLTQDL QQLQESEQQL DHLLHTCSTQ LRLLSEDADS QRSTLAYVTC bmy_00557T0/1-345 GRLEGLTQDL QQLQESERQL DHLIHICTTQ LRLLSEDADS QR--LAYVTC BACU015557/1-204 ---------- ---------- ---------- ---LTPPT-- ----LAYVTC 251 300 ENSTTRP00000009580/1-437 QDLRSIADPA EQMVMVIKAP PETQLQAVDS SETFQISLKS KQGPIDVFLC ENSP00000345571/1-437 QDLRSIADPA EQMVMVIKAP PETQLQAVDS SENFQISLKS KQGPIDVFLC ENSBTAP00000005182/1-439 QDLRSIADPA EQMVMVIKAP PETQLQAVDS SENFQISLKS KQGPIDVFLC bmy_00557T0/1-345 QDLRSIADPA EQMVMVIKAP PETQLQAVDS SETFQISLKS KQGPIDVFLC BACU015557/1-204 QDLRSIADPA EQMVMVIKAP PETQLQAVDS SETFQISLKS KQGPIDVFLC 301 350 ENSTTRP00000009580/1-437 PEESAGGISP GKTPSQGAAS GEEDRAADPA TTVPPPP-SS PPSSPATDPS ENSP00000345571/1-437 PEETVGGISP GKTPSQEVTS EEENRATDSA TIVSPPP-SS PPSSLTTDPS ENSBTAP00000005182/1-439 PEESVGGTSP GKTPSQGAAS GEEDRTADLA TAVPPPP-SS PRSSPATDPS bmy_00557T0/1-345 PEESAGGISP GKTSSQGAAS GEEDRAADPA TTVPPPPSSS PPSSPATDPS BACU015557/1-204 PEESAGGISP GKTPSQGAAS GEEERAADPA TTVPPPPSSS PPSSPATDPS 351 400 ENSTTRP00000009580/1-437 QSLLSLEQEP LLSRMGCLRV PMEDNRLSPL VAADSLMEHV REDFAGLLPD ENSP00000345571/1-437 QSLLSLEQEP LLSRMGSLRA PVDEDRLSPL VAADSLLEHV REDFSGLLPE ENSBTAP00000005182/1-439 QSLLSLEQEP LLSRMGGLRA PVDEDRLSPL VAADSLLEHV KEDFSSLLPE bmy_00557T0/1-345 QSLLSLEQEP LLSRMGSLRA PVDEDRLSPL VAADSLLEHV REDFAGLLPE BACU015557/1-204 QSLLSLEQEP LLSRMGSLRA PMDEDRLSPL VAADSLLEHV REDFAGLLPE 401 450 ENSTTRP00000009580/1-437 EFISCPPXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXF ENSP00000345571/1-437 EFISLSPPHE ALDYHFGLEE GEGIRDLFDC DFGDLTPLDF ENSBTAP00000005182/1-439 EFITLSPPHE ALDYHFGLEE GEGIRDLFDC DFGDLTPLDF bmy_00557T0/1-345 EFISLSPPHE ALDYHFGLEE GEGIRDLFDC DFGDLTPLDF BACU015557/1-204 EFISLSPPHE ALDYHFGLEE GEGIRDLFDC DFGDLTPLDF