KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:25:28 2014 Check: 00 .. Name: ENSP00000353868/1-454 Len: 485 Check: 1989 Weight: 1.00 Name: ENSBTAP00000005039/1-401 Len: 485 Check: 2522 Weight: 1.00 Name: bmy_07659T0/1-457 Len: 485 Check: 199 Weight: 1.00 Name: ENSTTRP00000003249/1-452 Len: 485 Check: 2295 Weight: 1.00 // 1 50 ENSP00000353868/1-454 ---------- ---------- ---------- -MVFCLSSEE PRRPLRSDMV ENSBTAP00000005039/1-401 ---------- ---------- ---------- -MVFCLENEE PCRPQRSNMV bmy_07659T0/1-457 MESAGRRAAH RPLTGTHGLC GAEAPVVVGG GMVFCLENEE LRCPLGSTMV ENSTTRP00000003249/1-452 ---------- ---------- ---------- -MVFCLENEE ARRPLGSTMV 51 100 ENSP00000353868/1-454 HFQASEVQQL LHNKFVVILG DSIQRAVYKD LVLLLQKDSL LTAAQLKAKG ENSBTAP00000005039/1-401 RFQASEVQQL LHNKFVVILG DSIQRSVYKD LVLLLQKDSL LTAAQLKAK- bmy_07659T0/1-457 HFQASEVQQL LHNKFVVILG DSIQRAVYKD LVLLLQKDSL LTAAQLKAKG ENSTTRP00000003249/1-452 QFQASEVQQL LHNKFVVILG DSIQRAVYKD LVLLLQKDSL LTAAQLKAKG 101 150 ENSP00000353868/1-454 ELSFEQDQLV AGGQLGELHN GTQYREVRQF CSGSGHHLVR FYFLTRVYSE ENSBTAP00000005039/1-401 ---------- ---------- ---------- ---------- ---------- bmy_07659T0/1-457 ELSFEQDQLV AGGQLGELHN GTQYREVRQF CSGSGHHLVR FYFLTRVYSE ENSTTRP00000003249/1-452 ELSFEQDQLM AGGQLGELHN GTQYREVRQF CSGSGHHLVR FYFLTRVYSE 151 200 ENSP00000353868/1-454 YLEDVLEELT YGPAPDLVII NSCLWDLSRY GRCSMESYRE NLERVFVRMD ENSBTAP00000005039/1-401 YLEGVLEELT YGPAPDLVII NSCLWDLSRY GRCSMESYRE NLERVFVRMD bmy_07659T0/1-457 YLEGVLEELT YGPAPDLVII NSCLWDLSRY GRCSMESYRE NLERVFMRMD ENSTTRP00000003249/1-452 YLEGILEELT YGPAPDLVII NSCLWDLSRY GRCSMESYRE NLERVFMRMD 201 250 ENSP00000353868/1-454 QVLPDSCLLV WNMAMPLGER ITGGFLLPEL QPLAGSLRRD VVEGNFYSAT ENSBTAP00000005039/1-401 QVLPDSCLLV WNMAMPLGER ITGGFLLPEL QPLAGSLRRD VVEGNFYSAT bmy_07659T0/1-457 QVLPDSCLLV WNMAMPLGER ---------L QPLAGSLRRD VVEGNFYSAT ENSTTRP00000003249/1-452 QVLPDSCLLV WNMAMPLGER VTGGFLLPEL QPLAGSLRRD VVEGNFYSAT 251 300 ENSP00000353868/1-454 LAGDHCFDVL DLHFHFRHAV QHRHRDGVHW DQHAHRHLSH LLLTHVADAW ENSBTAP00000005039/1-401 LAGDHCFDVL DLHFHFRHAV RHRHRDGVHW DQHAHRHLSH LLLTHVADAW bmy_07659T0/1-457 LAGDHCFDVL DLHFHFRHAV QHRHRDGVHW DQHAHRHLSH LLLTHVADAW ENSTTRP00000003249/1-452 LAGDHCFDVL DLHFHFRHAV QHRHRDGVHW DQHAHRHLSH LLLTHVADAW 301 350 ENSP00000353868/1-454 GVELPKRGYP PDPWIEDWAE MNHPFQGSHR QTPDFGEHLA LLPPPPSSLP ENSBTAP00000005039/1-401 GVELPKRDYP HDPWIKDWPE PDHLFQGSQG QPSDFGEQPA L--PPLSPLP bmy_07659T0/1-457 GVELPKRDYP HDPWIEDWPE PDHLFQGSQG QPPDFGEQLA L--PPPSPLP ENSTTRP00000003249/1-452 GVELPKRDYP HDPWIEDWPE PDHLFQGSQG QTPAFREQLA L--PPPSPLP 351 400 ENSP00000353868/1-454 PPMPFPYPLP QPSPPPLFPP LPQDTPFFPG QPFPPHEFFN YNPVEDFSMP ENSBTAP00000005039/1-401 PPMPFPYPLP QPSLPPLFPP LPQEPPFFPG QPFPPCEFFN FNPMEDFSIP bmy_07659T0/1-457 LPMHFPYPLP QPSPPPLFPP LPQDPPFFPG QPFPPHEFFN FNPTEDCSMP ENSTTRP00000003249/1-452 LPMHFPYPLP QPSPPPLFPL LPQDPPFFPG QPFPPHEFFN FNPTEDCSMP 401 450 ENSP00000353868/1-454 PHLGCGPGVN FVPGPLPPPI PGPNPHGQHW GPVVHRGMPR YVPNSPYHVR ENSBTAP00000005039/1-401 PHLGCGPGVN FVPGPVPPPV PSPVRHGQHQ GLAVHRGMSR CVHNSPYHVP bmy_07659T0/1-457 PHL------- ---------V PSPIPHGQHR GLAVHRGMPR CTHTSPYHVP ENSTTRP00000003249/1-452 PHLGCSPAVN FVPGPLPPPV SSPIPHGQHR GLAIHRGMPR CIHTSPYHVP 451 500 ENSP00000353868/1-454 RMGGPCRQRL RHSERLIHTY KLDRRPPAHS GTWPG ENSBTAP00000005039/1-401 RMGAPCRQRP RHSDRLIHTY KLDRRPHAHS GTWPG bmy_07659T0/1-457 RTGAPCRQRP RHSDRLIHTY KLDRWPPAHS GTWP- ENSTTRP00000003249/1-452 RTGAPCRQRP RHSDRLIHTY KLDKWPPPHS GTWPG