KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:15 2014 Check: 00 .. Name: ENSP00000216951/1-474 Len: 528 Check: 2887 Weight: 1.00 Name: ENSBTAP00000004559/1-474 Len: 528 Check: 2464 Weight: 1.00 Name: bmy_00576T0/1-392 Len: 528 Check: 7188 Weight: 1.00 Name: BACU015541/1-516 Len: 528 Check: 8824 Weight: 1.00 Name: ENSTTRP00000013461/1-473 Len: 528 Check: 8744 Weight: 1.00 // 1 50 ENSP00000216951/1-474 ---------- ---------- ---------- ---------- --MATNWGSL ENSBTAP00000004559/1-474 ---------- ---------- ---------- ---------- --MATGWGSL bmy_00576T0/1-392 MPLEELSIGE SKGRQV---- ---------- ---------- -GMATGWGSL BACU015541/1-516 MPVEELNIGE SKGRQVLQTE KNPITIQKEG TVKELGSCQW VRMATGWGSL ENSTTRP00000013461/1-473 ---------- ---------- ---------- ---------- --MATGWGSL 51 100 ENSP00000216951/1-474 LQDKQQLEEL ARQAVDRALA EGVLLRTSQE PTSSE----- -------VVS ENSBTAP00000004559/1-474 LQDEQQLEEL ARQAVDRALA EGVLLRTSQA PSSSH----- -------VVS bmy_00576T0/1-392 LQDEQQLEEL ARQAVDRALA EGVLLRTSQE PSSSDVFYPC PLSLLDQVVS BACU015541/1-516 LQDEQQLEEL TRQAVDRALA EGVLLRTSQE PSSSD----- -------VVS ENSTTRP00000013461/1-473 LQDEQQLEEL ARQAVDRALA EGVLLRTSQE PSSSD----- -------VVS 101 150 ENSP00000216951/1-474 YAPFTLFPSL VPSALLEQAY AVQMDFNLLV DAVSQNAAFL EQTLSSTIKQ ENSBTAP00000004559/1-474 YAPFTLFPSP VPSALLEQAY AVQADFNLLV DAVSQNAVFL EQTLSSTIKR bmy_00576T0/1-392 YAPFTLFPSL VTSALLEQAY AVQMDFNLLV DAVSQNAAFL EQTLSSTIKR BACU015541/1-516 YAPFTLFPSL VTSALLEQAY AVQMDFNLLV DAVSQNAAFL EQTLSSTIKR ENSTTRP00000013461/1-473 YAPFTLFPSL VPSALLEQAY AVQMDFNLLV DAVSQNAAFL EQTLSSTIKR 151 200 ENSP00000216951/1-474 DDFTARLFDI HKQVLKEGIA QTVFLGLNRS DYMFQRSADG SPALKQIEIN ENSBTAP00000004559/1-474 DSFTARLFDI HKQVLKEGIA QTVFLGLNRS DYMFQCNPDG SAALKQIEIN bmy_00576T0/1-392 DNFTAHLFDI HKQVLKEGIA QAVFLGLNRS DYMFQRNADG SAALKQIEIN BACU015541/1-516 DNFTAHLFDI HKQVLKEGVA QTVFLGLNRS DYMFQRNADG SAALKQIEIN ENSTTRP00000013461/1-473 DNFTAHLFDI HKQVLKEGIA QTVFLGLNRS DYMFQRNADG SAALKQIEIN 201 250 ENSP00000216951/1-474 TISASFGGLA SRTPAVHRHV LSVLSKTKEA GKILSNNPSK GLALGIAKAW ENSBTAP00000004559/1-474 TVSASFGGLA SRTPAVHRHV LSVLGKTKEA AKILSNNPSK GLAMGIAKAW bmy_00576T0/1-392 TISASFGGLA SRTPAVHRHV LNVLGKTKEA AKILSNNPSK GLAMGIAKAW BACU015541/1-516 TISASFGGLA SRTPAVHRHV LNVLGKTKEA AKILSNNPSK GLAMGIAKAW ENSTTRP00000013461/1-473 TISASFGGLA SRTPAVHRHV LNVLGKTKEA AKILSNNPSK GLAMGIAKAW 251 300 ENSP00000216951/1-474 ELYGSPNALV LLIAQEKERN IFDQRAIENE LLARNIHVIR RTFEDISEKG ENSBTAP00000004559/1-474 ELYGSANAQV LLIAQEKERN IFDQRAIENE LLARNIHVIR RRFEDVSEKG bmy_00576T0/1-392 ELYGSANARV LLIAQEKERN IFDQRAIENE LLARNIHVIR XKFEDVSEKG BACU015541/1-516 ELYGSANARV LLIAQEKERN IFDQRAIENE LLARNIHVIR RKFEDVSEKG ENSTTRP00000013461/1-473 ELYGSANARV LLIAQEKERN IFDQRAIENE LLARNIHVIR RKFEDVSEKG 301 350 ENSP00000216951/1-474 SLDQDRRLFV DGQEIAVVYF RDGYMPRQYS LQNWEARLLL ERSHAAKCPD ENSBTAP00000004559/1-474 SLDQDRRLFM DGQEIAVVYF RDGYMPGHYS LQNWEARLLL ERSCAVKCPD bmy_00576T0/1-392 SLDQDRRLFM DGQEVAVVYF RDGYMPSHYS LQ-------- ---------- BACU015541/1-516 SLDQDRRLFM DGQEVAVVYF RDGYMPSHYS LQNWEARLLL ERSCAVKCPD ENSTTRP00000013461/1-473 SLDQDRRLFM DDQEVAVVYF RDGYM-SHYS LQNWGARLLL ERSCAVKCPD 351 400 ENSP00000216951/1-474 IATQLAGTKK VQQELSRPGM LEMLLPGQPE AVARLRATFA GLYSLDVGEE ENSBTAP00000004559/1-474 IATQLAGTKK VQQELSRVGV LESFLPGQPE AVARLRATFA GLYSLDLGEE bmy_00576T0/1-392 ---------- ---------- ---------- ---------- -------GEE BACU015541/1-516 VATQLAGTKK VQQELSRSGM LEVLLPGQPE AVARLRATFA GLYSLDMGEE ENSTTRP00000013461/1-473 IATQLAGTKK VQQELSRSGM LEVLLPGQPE AVARLRATFA GLYSLDMGEE 401 450 ENSP00000216951/1-474 GDQAIAEALA APSRFVLKPQ REGGGNNLYG EEMVQALKQL KDSEERASYI ENSBTAP00000004559/1-474 GDQAITKAIA APSCFVLKPQ REGGGNNLYG EEMVQALERL KDSEERASYI bmy_00576T0/1-392 GDQAITEAIA APSCFVLKPQ REGGG----- ---------- ----KKRIWV BACU015541/1-516 GDQAITEAIA APNCFVLKPQ REGGGNNLYG EEMVQALERL KDSEERASYI ENSTTRP00000013461/1-473 GDQAITEAIA APSCFVLKPQ REGGGNNLYG EEMVQALERL KDSEERASYI 451 500 ENSP00000216951/1-474 LMEKIEPEPF ENCLLRPGSP ARVVQCISEL GIFGVYVRQE KTLVMNKHVG ENSBTAP00000004559/1-474 LMEKIEPEPF RNCLLRPGSP ARVIQCISEL GIFGVYVREG KTLVMNKHVG bmy_00576T0/1-392 Q--------- ---------- ---SQATGDS G-----KRQG KTLVMNKHVG BACU015541/1-516 LMEKIEPEPF ENCLLRPGSP ARVAQCISEL GIFGVYVRQG KTLVMNKHVG ENSTTRP00000013461/1-473 LMEKIEPEPF GNCLLRPGSP ARVAQCISEL GIFGVYVRQG KTLVMNKHVG 501 550 ENSP00000216951/1-474 HLLRTKAIEH ADGGVAAGVA VLDNPYPV ENSBTAP00000004559/1-474 HLLRTKAIEH ADGGVAAGVA VLDNPYPV bmy_00576T0/1-392 HLLRTKAIEH ADGGVAAGVA VLDNPYPV BACU015541/1-516 HLLRTKAIEH ADGGVAAGVA VLDNPYPV ENSTTRP00000013461/1-473 HLLRTKAIEH ADGGVAAGVA VLDNPYPV