KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:23:19 2014  Check: 00 ..

 Name: ENSP00000383456/1-239     Len:    241  Check:  3787  Weight:  1.00
 Name: ENSBTAP00000004199/1-236  Len:    241  Check:  5913  Weight:  1.00
 Name: ENSTTRP00000015680/1-234  Len:    241  Check:  3010  Weight:  1.00
 Name: bmy_19425T0/1-234         Len:    241  Check:  4724  Weight:  1.00
 Name: BACU007346/1-236          Len:    241  Check:  4098  Weight:  1.00

//


                          1                                                   50
ENSP00000383456/1-239     --MEGLPCPC PALPHFWQLR SHLMAEGSRT QAPGKGPPLS IQFLRAQYEG 
ENSBTAP00000004199/1-236  IRMKGLPCPC PALPHFWQLG SCYMAEGSGP PAPRKGPLLN IQLLRAQYEG 
ENSTTRP00000015680/1-234  --MKGLPCPC PTLPHFWQLG SPFMADGSGT QAPGKGPLLS MQLLRAQYAG 
bmy_19425T0/1-234         --MKGLPCPC PALPHFWQLG SPFMADGSGT QAPGKGALLS IQLLRARYEG 
BACU007346/1-236          IQMKELPCPC PALPHFWQLG SPFMADGSGT QAPGKGALLS IQLLRARYEG 


                          51                                                 100
ENSP00000383456/1-239     LKRQQRTQAH LLVLPKGGNT PAPAESMVNA VWINKERRSS LSLEEADSEV 
ENSBTAP00000004199/1-236  LRRKQRAQAH VVVLPKGGNL PAPAESMVSA VWINKERRHS LTPEEAAPEA 
ENSTTRP00000015680/1-234  LRRQQKAQAH VVVLPKGGNM PARAEAVVSA VWINKERRHS LSLEEADPEA 
bmy_19425T0/1-234         LRRQQKAQAH VVVLPKGGNM PAPAEAIVSA VWINKERRHS LSLEEADPEA 
BACU007346/1-236          LRRQQKAQAH VVVLPKGGNM PAPAEAMVSA VWINKERRHS LSLEEADPEA 


                          101                                                150
ENSP00000383456/1-239     EGRLEEAAQG CLQAPKSPWH THLEMHCLVQ TSPQDTSHQV HHRGKLVGSD 
ENSBTAP00000004199/1-236  EEMLEEDDRG CLQTPESPWH THLEMHRLVQ TFRQGTSLHV RHKDKFTGSE 
ENSTTRP00000015680/1-234  EETLEEADRG CFQAPESPWH THLEMHRLVQ TFHQETSHQV KHKDKFMGAE 
bmy_19425T0/1-234         EEMLEEADRG CLQAPKSPWH THLEMHRSVQ TFHQETSHQV KHKNKFMGSE 
BACU007346/1-236          EEMLEEADRG CLQAPESPWH THLEMHRSVQ TFHPETSHQV KPKDKFMGSE 


                          151                                                200
ENSP00000383456/1-239     QRLPPEGDTH LFETNQMTQQ GTGIPEAAQL PCQVGNTQTK AVESGLKFST 
ENSBTAP00000004199/1-236  PRLP-----G LFEDTQMTQQ ETTIPETAQP ECQADESQTK TVGSGFHVGT 
ENSTTRP00000015680/1-234  QRLP-----G LFEDTQMTQQ GSTIPEAAQH ECQVGDTQTK AVGSGLNIGA 
bmy_19425T0/1-234         QRLP-----G LFEDTQMTQQ GSTIPEAAQH ECQVGNTQTK AVGSSLNIGT 
BACU007346/1-236          QRLP-----G LFEDTQMTQQ GSTIPEAAQH ECQVGNTQTK AVGSGLNIGT 


                          201                                                250
ENSP00000383456/1-239     QCPLSIKNPH RSGKPAYYPF PQRKTPRISQ AARNLGLYGS A 
ENSBTAP00000004199/1-236  QGPPAIKRPH RAGKPAHYPF PQRKTPRISQ AARNLGLYGP V 
ENSTTRP00000015680/1-234  QGPPPIKKPH RSGRPAHYPF PQRKTPRISQ AARNLGLYGP A 
bmy_19425T0/1-234         QGPPSXKKPH RSGKPAHYPF PXRKTPRISQ AAXNLGLYGP A 
BACU007346/1-236          QGPPTIKKPH RSGKPAHYPF PQRKTPRISQ AARNLGLYGP A