KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:12 2014 Check: 00 .. Name: ENSP00000340998/1-628 Len: 835 Check: 4912 Weight: 1.00 Name: bmy_13862T0/1-703 Len: 835 Check: 299 Weight: 1.00 Name: ENSBTAP00000004136/1-627 Len: 835 Check: 4105 Weight: 1.00 Name: BACU000957/1-628 Len: 835 Check: 2215 Weight: 1.00 Name: ENSTTRP00000003491/1-628 Len: 835 Check: 2529 Weight: 1.00 // 1 50 ENSP00000340998/1-628 MGSCARLLLL WGCTVVAAGL SGVAGVSSRC EKACNPRMGN LALGRKLWAD bmy_13862T0/1-703 MGSCARLLLL WGCSAVAAGL SGVAGVSSRC EKACNPRMGN LALGRKLWAD ENSBTAP00000004136/1-627 MGSCARLLLL WGCSAVAAGL SGVAGVSSRC EKACNPRMGN LALGRKLWTD BACU000957/1-628 MGSCARLLLL WGCSAVAAGL SGVAGVSSRC EKACNPRMGN LALGRKLWAD ENSTTRP00000003491/1-628 MGSCARLLLL WGCSAVAAGL SGVAGVSSRC EKACNPRMGN LALGRKLWAD 51 100 ENSP00000340998/1-628 TTCGQNATEL YCFYSENTDL TCRQPKCDKC NAAYPHLAHL PSAMADSSFR bmy_13862T0/1-703 TTCGQNATEL YCFYSENTDL TCQQPKCDKC NAAQPHLAHL PAAMADSSFR ENSBTAP00000004136/1-627 TTCGQNATEL YCFYSENTDL TCQQPKCDKC NAAQPHLAHL PAAMADSSFR BACU000957/1-628 TTCGQNATEL YCFYSENTDL TCQQPKCDKC NAAQPHLAHL PAAMADSSFR ENSTTRP00000003491/1-628 TTCGQNATEL YCFYSENTDL TCQQPKCDKC SAAQPHLAHL PAAMADSSFR 101 150 ENSP00000340998/1-628 FPRTWWQSAE DVHREKIQLD LEAEFYFTHL IVMFKSPRPA AMVLDRSQDF bmy_13862T0/1-703 FPRTWWQSAE DVHREKIQLD LEAEFYFTHL IMVFKSPRPA AMVLDRSQDF ENSBTAP00000004136/1-627 YPRTWWQSAE DVHREKIQLD LEAEFYFTHL IMVFKSPRPA AMVLDRSQDF BACU000957/1-628 FPRTWWQSAE DVHREKIQLD LEAEFYFTHL IMVFKSPRPA AMVLDRSQDF ENSTTRP00000003491/1-628 FPRTWWQSAE DVHREKIQLD LEAEFYFTHL IMVFKSPRPA AMVLDRSQDF 151 200 ENSP00000340998/1-628 GKTWKPYKYF ATNCSATFGL EDDVVKKGAI CTSKYSSPFP CTGGEVIFKA bmy_13862T0/1-703 GKTWKPYKYF ATNCSATFGL EDDVVKKGAI CTSRYSNPFP CTGGEVIFRA ENSBTAP00000004136/1-627 GKTWKPYKYF ATNCSATFGL EDDVVKKGAI CTSRYSNPFP CTGGEVIFRA BACU000957/1-628 GKTWKPYKYF ATNCSATFGL EDDIVKKGAI CTSRYSNPFP CTGGEVIFRA ENSTTRP00000003491/1-628 GKTWKPYKYF ATNCPATFGL EDDVVKKGAI CTSRYSNPFP CTGGEVIFRA 201 250 ENSP00000340998/1-628 LSPPYDTENP YSAKVQEQLK ITNLRVQLLK RQSCPCQRND LNEEPQHFTH bmy_13862T0/1-703 LSPPYDVENP YSAKLQEQLK ITNLRVQLLK RQSCPCQRNN LNAKPQHFTH ENSBTAP00000004136/1-627 LSPPNDMENP YGAKVQEQLK ITNLRVQLLK RQSCPCQRNH LNAEPQHFTH BACU000957/1-628 LSPPYDVENP YSAKLQEQLK ITNLRVQLLK RQSCPCQRNN LNAKPQHFTH ENSTTRP00000003491/1-628 LSPPYDVENP YSAKVQEQLK ITNLRVQLLK RQSCPCQRNN LNAKPQHFTH 251 300 ENSP00000340998/1-628 YAIYDFIVKG SCFCNGHADQ CIPVHGFRPV KAPGTFH--- ---------- bmy_13862T0/1-703 YAIYDFIVKG SCFCNGHADQ CIPVDGFRPV KAPGAFHVGE SHWEWVSCIC ENSBTAP00000004136/1-627 YAIYDFIVKG SCFCNGHADQ CIPIDGFRPV KAPGAFH--- ---------- BACU000957/1-628 YAIYDFIVKG SCFCNGHADQ CIPVDGFRPV KAPGAFH--- ---------- ENSTTRP00000003491/1-628 YAIYDFIVKG SCFCNGHADQ CIPVDGFRPV KAPGAFH--- ---------- 301 350 ENSP00000340998/1-628 ---------- ---------- ---------- ---------- ---------- bmy_13862T0/1-703 FSPNSSNPII ISCARDKLVK VWNLEYCKLK SNHISPPGHL NTVTVSPDGS ENSBTAP00000004136/1-627 ---------- ---------- ---------- ---------- ---------- BACU000957/1-628 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003491/1-628 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000340998/1-628 ---------- ---------- ---------- ---------- ---------- bmy_13862T0/1-703 LCASEGNDGQ AMLWHLNKSK HLYMPDGGDI INSLCFSLNH CWLCATMGPN ENSBTAP00000004136/1-627 ---------- ---------- ---------- ---------- ---------- BACU000957/1-628 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003491/1-628 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000340998/1-628 ---------- ---------- ---------- ---------- ---------- bmy_13862T0/1-703 TQLWDLEGKV IVNELKQEVI STSSKAEPPQ YTSLTWSADG KSLKIQLFST ENSBTAP00000004136/1-627 ---------- ---------- ---------- ---------- ---------- BACU000957/1-628 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003491/1-628 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000340998/1-628 ---------- ---------- ---------- ---------- ---MVHGKCM bmy_13862T0/1-703 IFCQPTKAWT VVMVTWMSRL CTTSFKRALM FVSADPMPRT WAYMVHGKCM ENSBTAP00000004136/1-627 ---------- ---------- ---------- ---------- ---VVHGKCI BACU000957/1-628 ---------- ---------- ---------- ---------- ---VVHGKCM ENSTTRP00000003491/1-628 ---------- ---------- ---------- ---------- ---VVHGKCM 501 550 ENSP00000340998/1-628 CKHNTAGSHC QHCAPLYNDR PWEAADGKTG APNECRTCKC NGHADTCHFD bmy_13862T0/1-703 CKHNTAGTHC QHCAPLYNDH PWEAADGKTG SPKECRTCKC NGHADACHFD ENSBTAP00000004136/1-627 CKHNTAGTHC QHCAPLYNDR PWEAADGKTG SPNECRTCKC NGHADACHFD BACU000957/1-628 CKHNTAGTHC QHCAPLYNDR PWEAADGKTG SPKECRTCKC NGHADACHFD ENSTTRP00000003491/1-628 CKHNTAGTHC QHCAPLYNDR PWEAADGKTG SPKECRTCKC NGHADACHFD 551 600 ENSP00000340998/1-628 VNVWEASGNR SGGVCDDCQH NTEGQYCQRC KPGFYRDLRR PFSAPDACKP bmy_13862T0/1-703 INVWEASGNR SGGICNDCQH NTEGQHCQRC KPGFYRDLRR PFSAPDACK- ENSBTAP00000004136/1-627 INVWEASGNR SGGVCNDCQH NTEGQHCQRC KPGFYWDLRR PFSAPDACKS BACU000957/1-628 INVWEASGNR SGGVCNDCQH NTEGQHCQRC KPGFYRDLRR PFSAPDACKL ENSTTRP00000003491/1-628 INVWEASGNR SGGVCNDCQH NTEGQHCQRC KPGFYRDLRR PFSAPDACKL 601 650 ENSP00000340998/1-628 CSCHPVGSAV LPANSVTFCD PSNGDCPCKP GVAGRRCDRC MVGYWGFGDY bmy_13862T0/1-703 ---------- ---------- ---------- ---------- ----YSFEDL ENSBTAP00000004136/1-627 CSCHPVGSAV LPFSSVTFCD PSNGDCPCKP GVAGPHCERC MVGYWGFGDY BACU000957/1-628 CSCHPVGSAV LPFSSVTFCD PSNGDCPCKP GVAGPHCDRC MVGYWGFGDY ENSTTRP00000003491/1-628 CSCHPVGSAV LPFSSVTFCD PSNGDCPCKP GVAGPHCDRC MVGYWGFGAY 651 700 ENSP00000340998/1-628 GCRPCDCAGS CDPITGDCIS SHTDIDWYHE VPDFRPVHNK S-EPAWEWED bmy_13862T0/1-703 ---------- ---------- ---------- VVIWKTLHAA SGEKMYLHIS ENSBTAP00000004136/1-627 GCRPCDCAGS CDPHTGDCLS S-TDIDWYHE VPDFHSMHNK S-EPTWDWKD BACU000957/1-628 GCRPCDCAGS CDPLTGDCIS SSTDIDWHHE IPNFHSMHNK S-EPTWEWED ENSTTRP00000003491/1-628 GCRPCDCAGS CDPLTGDCIS SSTDIDWHHE IPNFHSMHNK S-EPTWEWED 701 750 ENSP00000340998/1-628 AQGFSALLHS GKCECKEQTL GNAKAFCGMK YSYVLKIKIL SAHDKGTHVE bmy_13862T0/1-703 LKNFCQIAES SKCECKEQVL RNSKAFCGMK YSY------- ---------- ENSBTAP00000004136/1-627 EQGFSALRHS GKCECKEQVL GNSKAFCGMK YSYVLKIKIL SAHDKGSHAE BACU000957/1-628 EQGFSALRHS GKCECKEQVL RNSKAFCGMK YSYVLKIKIL SAHDKGSHAE ENSTTRP00000003491/1-628 EQGFSALRHS GKCECKEQVL RNSKAFCGMK YSYVLKIKIL SAHDKGSHAE 751 800 ENSP00000340998/1-628 VNVKIKKVLK STKLKIFRGK RTLYPESWTD RGCTCPILNP GLEYLVAGHE bmy_13862T0/1-703 ---------- ---------- ---------- ---------- GLEYLVAGHE ENSBTAP00000004136/1-627 VNVKIKKVLK STKLKILRGK RTLYPESWTN RGCTCPILNP GLEYLVAGHE BACU000957/1-628 VNVKIKKVLK STKLKILRGK RTLYPESWTN RGCTCPILNP GLEYLVAGHE ENSTTRP00000003491/1-628 VNVKIKKVLK STKLKILRGK RTLYPESWTN RGCTCPILNP GLEYLVAGHE 801 850 ENSP00000340998/1-628 DIRTGKLIVN MKSFVQHWKP SLGRKVMDIL KRECK bmy_13862T0/1-703 DVRTGKLVVN MKSFVQHWKP SLGRKVMDIL KRECK ENSBTAP00000004136/1-627 DVRTGKLVVN MKSFVQHWKP SLGRKVMDIL RRECK BACU000957/1-628 DVRTGKLVVN MKSFVQHWKP SLGRKVMDIL KRECK ENSTTRP00000003491/1-628 DVRTGKLVVN MKSFVQHWKP SLGRKVMDIL KRECK